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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000025_pilon:1638914..1643131- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038030 ID=XLOC_038030|Name=XLOC_038030|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4218bp|location=Sequence derived from alignment at sc0000025_pilon:1638914..1643131- (Clytia hemisphaerica_ch_hm2_pilon)
ACTGCGGAAGAAAAAATTAAGCAGATTTTCCAAGATGAAACTGCGACTGC
ATGTGAACATCCAGAAGTATCGCTTCTCGCGGCTCGGTTACGAGAAATAA
AATCTAAACCCAATTCTGATGGTTTTATAAACTTCGTCACAGACGTTGTT
AAAAATTACGGGCGCAAGCACAGAAATTGGTCTGATGATACAAAAACATT
GTTTGCCATTCTCTACAACTATGGCGGTAAAAAAGCAGCGATGTCGCTAT
CACAGTTTGTTGATGGTCCTTCTATCAAAACAATTTGGAGAACAGCCTCG
TCAGATCATAAGATACTTTGCACAATCGAACCCGAAATATTTGAAAGTGC
CAAAGAATTTTACGACATCATCACTTACGATGGTCCGTTTCAAGTAAGGC
TTTTTAATATGACTATGTATTTTAAAAATATTTGTAGAAGGTATAAACCG
TCAAACATTGCAAATTTATTGTTTAGCTTTTTATTACACAAAGACCGTTT
AGGTCATCTCAGACCATATAGTGCAGAAGAGTTAAAACTAGAATACCCAT
TTTTTTATAAGCAACAGAGTTGCTTAGGGCTCAGCCCTGAAATTGGCCAA
ATCTCCCGAAGTAGAGTCGTTTTAGAAAATCTCATGATTGCAAACGATAA
TAATATACACTAAATTATGCTCGTAGATCTAAAAAATAACATTTCTTGAT
TCCGTTTTTCAGATTTCTCTTGATGCAACAAGTATCATTCCCACACTTCG
CATGAGAAACAATACAGTCTATGGTCTTGCAACATCTGAAATTCCAACAG
TAATTACCGCTGAAGAGATCCTTCAACTTCTGGAAAAAAATCATCAAAAG
GCGAACCTTGCAAATCTGTTCCTGCTTGTTCCACTAGTCGAACATGTTCC
CCCATTCGTGATCGCTATAAAACCAGCTGTCAAAAGTGAAACTTCAGTTG
ACATTAAAAATTGGTTCTTGACTTGTAGAAAATTGGGTATAGATAATGGA
TTGAAAATCATTGGTCTTGGAGCTGATGGTGATGCCAAAGTACGAAAGTT
CTATACTTCATACTTCTCGAGTGACAGGAAGTTGAACAAAAAAACGGAAT
CAATGGTTATAGTTGAAGGCCTTCTATTTGGTTGTATTGTTGAAAAAACC
AGTTCAATTCCTGCAATACTTTTCCCGGATTGGAAACATCTCATTAAGAA
GTGGAGGAATCAACTTTTAAACGTCAAGCGATTGCTTTTTCTGGGTAAAA
ATATCGTGATGTTGGAGCACTTGTTGGAAGTCTACACGAGGTATTTTATT
CCAGTTTGTCAAAATCATATTATTATATTAACCAATAGTAAATATGTAGG
TCAGTCTCTCGTGTACAGTGATTAACCTTAACATAGACCAGTTCTGTTTA
ATACTTTATTTCAAGTTTTTTGTTGTAAATTGTATTAAGTAATTTTATTT
TTTTCAGCTTCAAGATGGCACACAATCTTTCAAAAACGGATGTATACGTA
CGTGATAAACAGAACGTGGATGCAGCTTTGCGAATTTTGGATCCTAGAGT
AAGAGCCTGTTTAAGGTCCCTTCCGAAAACATCGTCCACATGTGCATACT
TAAAAGTTGGAGAATATATCAAAGATGCATTTACATCAAAAACGTTATCA
ATCAGCGAACGTGCAAAATTAGCTTGGTTCCCAGTTTTATTTGTAAGGTA
TGTATTACTTAAATGGGATAAGTTTTTGCAGGGATTAACTTTTTCGGATG
AGGTATTTTCGTATAATTTGCGGGGATTTATTTTCACGGATGACGAAAAG
CAACCAAACACATTTATTGTTAATAAAAGTTACAAGCGTAAAGTATAGAT
TTGCGTTTTTTTACTTTTAGATTTTGGAAATCATGGATCCAAATCAAAGG
CTTCGAATTAGAGCAACATTTCATTAGCAATCAAACCTTCCAAGACCTGA
TACTTGCTGGACATTCAATCATTTTATCCATGCTCGCTTATTCTAAATAC
TTTGAAAATCATCCTTTTCAACCTTGGACTTTCGGCTCTGATGCGTGTGA
GAAGTTTTTTGCAAAACTTCGTGGATTCGTGCGAGGAAAACCAAACTTGA
CTTTTCTTGATATGCTTGATTTCTCTAAAAGGTAAGCTGTGTATATACTC
CCTTAAAATAAAATAAAATCTCCCTTATAATCGCTTCCGTAAAAAGAAAA
ACAAAATTTTTAATGAAATCATATCATAGTAAAAATTCTCTTACGAATTT
AATATTTTTAACAACTTCTATTTTAAGGTTACAAAGACTGGCTGAGTTAG
AACGACACACATTCGCAAAAGAAGCCAACATGATTTTTCTAAACGATCCG
GAAAAAGTTGAAAGTGAAGTTCAAAAAGGCATGAAAATTGCAGAAGAACA
GTGCATCACCCTCCTTAACGAATTGGGAATGGTTGAAGATTTAGAGAAAG
GTAAGATAATAGTTTTGAGTATTTCTCAACTTCGTACAACATTTCGATAA
ATCTAACTAAAGTCCATTCGCTTTAAATGTACAGCACTGGTTTCCGCTTG
CATGTGAAAACCAGATTCAACAACTACACTTTTTCCCTCAAGGCTGGTTT
TTACATACTAGTACAAGCGGAAATTAGTGCACAAATAAAGTGAATAGACT
TTTGATGAGTGGAAAAAAATAATAACCAATAAATCGACTAATAGACGAAA
TTGTGTCGAATCATAATTTTTTAAATAAGATTTTATAAGATTTTTAGTCA
TAACTAACTTGATTTTTTTTTTCTTCTTCAGGAAATATTCTATTGAAAGG
CCCTAACAACGAAATCCTGATAAAAAACGTTGACTATCACGGTTGGACGG
AAAATTGGAATGTTGGTCTCGAATCAGTTAACGAAGACCATGTGATCGAC
TTGCAGATGATGACAGGATCTGACAAGGAAATTCTTGATGACGCTATCGA
TGCATCACAAAAAGATTCCAGTTTGAATGAAATTGATCGTATTTTGCCAT
CTATACTTTTAACAAAAAATGCCACGATAGATCTGAACCAATGTGGTTTT
CGCTCTCTTGGAAAGTGTAAAGATGACGATGACTGGATTTGTTGTGAAGT
CTGTGAACAATGGTTCCATTTGCTTTGTGTTGGGCTTAAGTTCAAAAAGA
AATCACAAAAACAACGGTAAGTCCTTTTATAGGCTTAGGCACATCTAAAT
TTAGCCTAGCAAACAAGATGGTTTTTAATGCCAAAGAATGTTAAAGTTTT
AATACTTGAATGTTGATCTGACATTTTTCCCAAATTTTCGCGGATAGTTG
ATGGTTCTTTTCCAAGGTTTTAATACCTGCAAAATTCATCCTACCTTATT
GGTACTAATTTTCGCGTGTACTAATTTTCGCGCAATTTCGCACAGAGGCC
CAAAAATGCCCAAAAATTTAATACCGAAGTTATGCGAAGTCAGGGAGTGC
GCGAAAATTAATACCGTATTTTGAAGACAATTGGCTGGTGCGCGAAAATT
AATACGCGCTAAAATTAGTACCAATAAGGTTATTGAACAATATTCTCTTA
CTTGTAGCTACATTTTCACATGTCCGAAACACAAGGAAGCAATCAAAGAT
GTCACTTTTCGGAGTAAGATTGCCAAGGATACATATGAACGGAAATCTAT
TATCCAAGAAGAGACCTTGACGATTAAAGATTCGCAAGCTCAAGTTAGTG
GTAAAGCCAATTTTCGTAATGATGGTAGCAAGTTATACGTCAAGTACGAG
GGTAACATATACCACATTGCCAGGTTTCTTTCCATCGCAATGGGGAAAGT
ATATTCACCAGCGGCGTCTCGTAGTGAAAGATGGAAGTCCTCCAACACGA
ACGATTTTTTCAACCGATTACCTTTACCTGCAGATCCGAATGGTTTACAA
CAATTTGATCGTTGCCTGTTTAAAAACAAGACATCTGTTGTTGTTGGGCG
TATTGTCAGAATTCTAAGAAAAGTCGGAAAGTTCTCAACGTTTTGTGAGC
TGTCGACTAAAAATGCTGATCCAAATGTTACGTACACTTTCTTCATTGAC
ACTTCTAAAACAATTTTACTTCTCAATGATTGTTTTTGCAAGATTGGTGA
CGAGGAATTTGAAACTGAAAAAGAGATGTTAGTACATATTCTGAAAAAAA
AGAAAACAAGATTCAACAAGGATGCAGCAAAAGAAAAACTTTTCAAATTA
GCTTGTAAATGCAAATAG Coding sequence (CDS) from alignment at sc0000025_pilon:1638914..1643131- >XLOC_038030 ID=XLOC_038030|Name=XLOC_038030|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5382bp|location=Sequence derived from alignment at sc0000025_pilon:1638914..1643131- (Clytia hemisphaerica_ch_hm2_pilon)
ACTGCGGAAGAAAAAATTAAGCAGATTTTCCAAGATGAAACTGCGACTGC
ATGTGAACATCCAGAAGTATCGCTTCTCGCGGCTCGGTTACGAGAAATAA
AATCTAAACCCAATTCTGATGGTTTTATAAACTTCGTCACAGACGTTGTT
AAAAATTACGGGCGCAAGCACAGAAATTGGTCTGATGATACAAAAACATT
GTTTGCCATTCTCTACAACTATGGCGGTAAAAAAGCAGCGATGTCGCTAT
CACAGTTTGTTGATGGTCCTTCTATCAAAACAATTTGGAGAACAGCCTCG
TCAGATCATAAGATACTTTGCACAATCGAACCCGAAATATTTGAAAGTGC
CAAAGAATTTTACGACATCATCACTTACGATGGTCCGTTTCAAACTGCGG
AAGAAAAAATTAAGCAGATTTTCCAAGATGAAACTGCGACTGCATGTGAA
CATCCAGAAGTATCGCTTCTCGCGGCTCGGTTACGAGAAATAAAATCTAA
ACCCAATTCTGATGGTTTTATAAACTTCGTCACAGACGTTGTTAAAAATT
ACGGGCGCAAGCACAGAAATTGGTCTGATGATACAAAAACATTGTTTGCC
ATTCTCTACAACTATGGCGGTAAAAAAGCAGCGATGTCGCTATCACAGTT
TGTTGATGGTCCTTCTATCAAAACAATTTGGAGAACAGCCTCGTCAGATC
ATAAGATACTTTGCACAATCGAACCCGAAATATTTGAAAGTGCCAAAGAA
TTTTACGACATCATCACTTACGATGGTCCGTTTCAAATTTCTCTTGATGC
AACAAGTATCATTCCCACACTTCGCATGAGAAACAATACAGTCTATGGTC
TTGCAACATCTGAAATTCCAACAGTAATTACCGCTGAAGAGATCCTTCAA
CTTCTGGAAAAAAATCATCAAAAGGCGAACCTTGCAAATCTGTTCCTGCT
TGTTCCACTAGTCGAACATGTTCCCCCATTCGTGATCGCTATAAAACCAG
CTGTCAAAAGTGAAACTTCAGTTGACATTAAAAATTGGTTCTTGACTTGT
AGAAAATTGGGTATAGATAATGGATTGAAAATCATTGGTCTTGGAGCTGA
TGGTGATGCCAAAGTACGAAAGTTCTATACTTCATACTTCTCGAGTGACA
GGAAGTTGAACAAAAAAACGGAATCAATGGTTATAGTTGAAGGCCTTCTA
TTTGGTTGTATTGTTGAAAAAACCAGTTCAATTCCTGCAATACTTTTCCC
GGATTGGAAACATCTCATTAAGAAGTGGAGGAATCAACTTTTAAACGTCA
AGCGATTGCTTTTTCTGGGTAAAAATATCGTGATGTTGGAGCACTTGTTG
GAAGTCTACACGAGATTTCTCTTGATGCAACAAGTATCATTCCCACACTT
CGCATGAGAAACAATACAGTCTATGGTCTTGCAACATCTGAAATTCCAAC
AGTAATTACCGCTGAAGAGATCCTTCAACTTCTGGAAAAAAATCATCAAA
AGGCGAACCTTGCAAATCTGTTCCTGCTTGTTCCACTAGTCGAACATGTT
CCCCCATTCGTGATCGCTATAAAACCAGCTGTCAAAAGTGAAACTTCAGT
TGACATTAAAAATTGGTTCTTGACTTGTAGAAAATTGGGTATAGATAATG
GATTGAAAATCATTGGTCTTGGAGCTGATGGTGATGCCAAAGTACGAAAG
TTCTATACTTCATACTTCTCGAGTGACAGGAAGTTGAACAAAAAAACGGA
ATCAATGGTTATAGTTGAAGGCCTTCTATTTGGTTGTATTGTTGAAAAAA
CCAGTTCAATTCCTGCAATACTTTTCCCGGATTGGAAACATCTCATTAAG
AAGTGGAGGAATCAACTTTTAAACGTCAAGCGATTGCTTTTTCTGGGTAA
AAATATCGTGATGTTGGAGCACTTGTTGGAAGTCTACACGAGCTTCAAGA
TGGCACACAATCTTTCAAAAACGGATGTATACGTACGTGATAAACAGAAC
GTGGATGCAGCTTTGCGAATTTTGGATCCTAGAGTAAGAGCCTGTTTAAG
GTCCCTTCCGAAAACATCGTCCACATGTGCATACTTAAAAGTTGGAGAAT
ATATCAAAGATGCATTTACATCAAAAACGTTATCAATCAGCGAACGTGCA
AAATTAGCTTGGTTCCCAGTTTTATTTGTAAGCTTCAAGATGGCACACAA
TCTTTCAAAAACGGATGTATACGTACGTGATAAACAGAACGTGGATGCAG
CTTTGCGAATTTTGGATCCTAGAGTAAGAGCCTGTTTAAGGTCCCTTCCG
AAAACATCGTCCACATGTGCATACTTAAAAGTTGGAGAATATATCAAAGA
TGCATTTACATCAAAAACGTTATCAATCAGCGAACGTGCAAAATTAGCTT
GGTTCCCAGTTTTATTTGTAAGATTTTGGAAATCATGGATCCAAATCAAA
GGCTTCGAATTAGAGCAACATTTCATTAGCAATCAAACCTTCCAAGACCT
GATACTTGCTGGACATTCAATCATTTTATCCATGCTCGCTTATTCTAAAT
ACTTTGAAAATCATCCTTTTCAACCTTGGACTTTCGGCTCTGATGCGTGT
GAGAAGTTTTTTGCAAAACTTCGTGGATTCGTGCGAGGAAAACCAAACTT
GACTTTTCTTGATATGCTTGATTTCTCTAAAAGATTTTGGAAATCATGGA
TCCAAATCAAAGGCTTCGAATTAGAGCAACATTTCATTAGCAATCAAACC
TTCCAAGACCTGATACTTGCTGGACATTCAATCATTTTATCCATGCTCGC
TTATTCTAAATACTTTGAAAATCATCCTTTTCAACCTTGGACTTTCGGCT
CTGATGCGTGTGAGAAGTTTTTTGCAAAACTTCGTGGATTCGTGCGAGGA
AAACCAAACTTGACTTTTCTTGATATGCTTGATTTCTCTAAAAGGTTACA
AAGACTGGCTGAGTTAGAACGACACACATTCGCAAAAGAAGCCAACATGA
TTTTTCTAAACGATCCGGAAAAAGTTGAAAGTGAAGTTCAAAAAGGCATG
AAAATTGCAGAAGAACAGTGCATCACCCTCCTTAACGAATTGGGAATGGT
TGAAGATTTAGAGAAAGGTTACAAAGACTGGCTGAGTTAGAACGACACAC
ATTCGCAAAAGAAGCCAACATGATTTTTCTAAACGATCCGGAAAAAGTTG
AAAGTGAAGTTCAAAAAGGCATGAAAATTGCAGAAGAACAGTGCATCACC
CTCCTTAACGAATTGGGAATGGTTGAAGATTTAGAGAAAGGAAATATTCT
ATTGAAAGGCCCTAACAACGAAATCCTGATAAAAAACGTTGACTATCACG
GTTGGACGGAAAATTGGAATGTTGGTCTCGAATCAGTTAACGAAGACCAT
GTGATCGACTTGCAGATGATGACAGGATCTGACAAGGAAATTCTTGATGA
CGCTATCGATGCATCACAAAAAGATTCCAGTTTGAATGAAATTGATCGTA
TTTTGCCATCTATACTTTTAACAAAAAATGCCACGATAGATCTGAACCAA
TGTGGTTTTCGCTCTCTTGGAAAGTGTAAAGATGACGATGACTGGATTTG
TTGTGAAGTCTGTGAACAATGGTTCCATTTGCTTTGTGTTGGGCTTAAGT
TCAAAAAGAAATCACAAAAACAACGGAAATATTCTATTGAAAGGCCCTAA
CAACGAAATCCTGATAAAAAACGTTGACTATCACGGTTGGACGGAAAATT
GGAATGTTGGTCTCGAATCAGTTAACGAAGACCATGTGATCGACTTGCAG
ATGATGACAGGATCTGACAAGGAAATTCTTGATGACGCTATCGATGCATC
ACAAAAAGATTCCAGTTTGAATGAAATTGATCGTATTTTGCCATCTATAC
TTTTAACAAAAAATGCCACGATAGATCTGAACCAATGTGGTTTTCGCTCT
CTTGGAAAGTGTAAAGATGACGATGACTGGATTTGTTGTGAAGTCTGTGA
ACAATGGTTCCATTTGCTTTGTGTTGGGCTTAAGTTCAAAAAGAAATCAC
AAAAACAACGCTACATTTTCACATGTCCGAAACACAAGGAAGCAATCAAA
GATGTCACTTTTCGGAGTAAGATTGCCAAGGATACATATGAACGGAAATC
TATTATCCAAGAAGAGACCTTGACGATTAAAGATTCGCAAGCTCAAGTTA
GTGGTAAAGCCAATTTTCGTAATGATGGTAGCAAGTTATACGTCAAGTAC
GAGGGTAACATATACCACATTGCCAGGTTTCTTTCCATCGCAATGGGGAA
AGTATATTCACCAGCGGCGTCTCGTAGTGAAAGATGGAAGTCCTCCAACA
CGAACGATTTTTTCAACCGATTACCTTTACCTGCAGATCCGAATGGTTTA
CAACAATTTGATCGTTGCCTGTTTAAAAACAAGACATCTGTTGTTGTTGG
GCGTATTGTCAGAATTCTAAGAAAAGTCGGAAAGTTCTCAACGTTTTGTG
AGCTGTCGACTAAAAATGCTGATCCAAATGTTACGTACACTTTCTTCATT
GACACTTCTAAAACAATTTTACTTCTCAATGATTGTTTTTGCAAGATTGG
TGACGAGGAATTTGAAACTGAAAAAGAGATGTTAGTACATATTCTGAAAA
AAAAGAAAACAAGATTCAACAAGGATGCAGCAAAAGAAAAACTTTTCAAA
TTAGCTTGTAAATGCAAATAGCTACATTTTCACATGTCCGAAACACAAGG
AAGCAATCAAAGATGTCACTTTTCGGAGTAAGATTGCCAAGGATACATAT
GAACGGAAATCTATTATCCAAGAAGAGACCTTGACGATTAAAGATTCGCA
AGCTCAAGTTAGTGGTAAAGCCAATTTTCGTAATGATGGTAGCAAGTTAT
ACGTCAAGTACGAGGGTAACATATACCACATTGCCAGGTTTCTTTCCATC
GCAATGGGGAAAGTATATTCACCAGCGGCGTCTCGTAGTGAAAGATGGAA
GTCCTCCAACACGAACGATTTTTTCAACCGATTACCTTTACCTGCAGATC
CGAATGGTTTACAACAATTTGATCGTTGCCTGTTTAAAAACAAGACATCT
GTTGTTGTTGGGCGTATTGTCAGAATTCTAAGAAAAGTCGGAAAGTTCTC
AACGTTTTGTGAGCTGTCGACTAAAAATGCTGATCCAAATGTTACGTACA
CTTTCTTCATTGACACTTCTAAAACAATTTTACTTCTCAATGATTGTTTT
TGCAAGATTGGTGACGAGGAATTTGAAACTGAAAAAGAGATGTTAGTACA
TATTCTGAAAAAAAAGAAAACAAGATTCAACAAGGATGCAGCAAAAGAAA
AACTTTTCAAATTAGCTTGTAAATGCAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025_pilon | genome | sc0000025_pilon:1638914..1643131 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2047-2706:661 |
| Aaloc | 1663-2043:1436 |
| Aaloc | 1489-1659:1941 |
| Aaloc | 1228-1485:2348 |
| Aaloc | 988-1224:2761 |
| Aaloc | 409-984:3507 |
| Aaloc | 16-408:4219 |
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