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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000495_pilon:10829..12736- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038009 ID=XLOC_038009|Name=XLOC_038009|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1908bp|location=Sequence derived from alignment at sc0000495_pilon:10829..12736- (Clytia hemisphaerica_ch_hm2_pilon)
CAAACGCGCATCCCGTACCTCGACATCATTTCGAAGACCGAGTCAACTGC
ACTTAAAATGAGGCTCGGAAAACACGAGTTAAAAAACACGAGTTAAAAAA
CACGAGTTGCAAAAAACACGAGTTACGTTAAATGTGACGTCATCAATGGG
AAATTATGACGTCACAAGTAGATAATTTAACTCGTCAATTTATGATGCAC
CTTAATCTTACGAGTTAATTAACTCGTCAATTTATGGTGCACCTTAAACT
GACGAGTTGATTAACTCGTCAATTTAAGGTGCACCTTAATCTTACGAGTT
AATTAACTCGTCAATTTATGGTGCACCTTAAATTGACGAGTTAAATTTTC
ATGAAACCAAGTTGGTCAAAAATTCTAAAATTCAGATAAAAATAGGCATA
CATTCAATATATTATTGAATTGAAAATTATTAGTAGGCAAAATAGGTTCA
TTACGAGTACAATTTAAAAATAATTGTACGAAAAAGTTTTAAAATGTTTT
GCTAAAAAATAATATTTTTAGGAATCGTAACCTCTTTGTTAAAGTTCTAT
TTTTTGCATTTCCCCTTAGCATTTGAGCCAGCCTAAATACTTTTTGTCAA
CTTCTGTCTCAGTTAAAGACTATAGAATATTATGAGAGAAAATTACCATT
CCAATAGTTTTAAACTAAAAATAGGCACAAAAAATAATTTAACCGCCATT
TTAGAATTTTTGACCAACTTGGTTTCATGAAAATTTAACTCGTCAGTTTA
AGGTGCACCATAAATTGACGAGTTAATTAACTCGTAAGATTAAGGTGTAC
CATAAATTGACGAGTTAATTAACTCGTAAGATTATGGTGCACCATAAATT
GACGAGTTAATTAACTCGTCAGTTTAAGGTGCACCATAAATTGACGAGTT
AAATTATCTACTTGTGACGTCATAATTTCCCATTGATGACGTCACATTTA
ACGTAACTCGTGTTTTTTGCAAATCGTGTTTTTTAACTCGTGTTTTTTAA
CTCGTGTTTTCCGAGCCCCACTTAAAATCAAATACGCGACCAAAGAAGAT
ACAGTACCAATGAAACTTCGACAAGACGTGTTGCGCGATCTTAAAATGAC
AAAACCACCTAAAAACAATCTCAATTCTCGACAACGAAAAGCACTCAAAG
AACTTAAATCCGATAACCAGAATGTTATTTACCCATTTGACAAAGGTGCT
GGTCTTGTTAGAATCGATAGAGATGATGCTATCGCGAAAATCGAAGAACA
ACTCGGCAACACGGAAATCATCACACAAGATCCAACATCGACATTGGCAC
GAAAGTTTCAGAATACACTTCGACCCCTTCACCAAGCTGGGAAGTTCACT
GATAAAGAGTACAAAAAACTGTATCCATCCGATCCGATACCACCTCGAAT
GTACGGAACCATCAAAGCTCATAAACCGGAAAAGAATTACCCTATGAGAG
TGGTAGTTTCAACTATCGGTACTCCATCGTACGGAACTTCAGAATACCTT
GTGAAAATTATTCAACCAACTCTAAACAAAAACAACACAAGGCTCAAAAA
CTCGTACACATTCGCTGAGCTCACTAGATCCTGGGACGTTGACCCCGATG
AAATTCAAGTGTCGTATGACGTAGTAAACCTCTATCCGACAGTACCTGTA
GAGGAAGCTACTAACATAATCGTCCAGATGCTTGAAAACGATCACGACCT
ACCAAACAGGACAAAGCTAACGGTTGAAGACATCCGAACTTTGATTGAAC
TTTGGCTATCGAAATGTTACTTCCTGTGGAATGATAAACTGTACCGACTT
CAGAATTCGGCACCGATCGGTTTAGCACTAATGGTCGTAATGGTAGAAGC
TTTCCTACAATATCATGAACAAAACGCACTTCAAGCGGCCAACGCACACG
ATCCTCCT Coding sequence (CDS) from alignment at sc0000495_pilon:10829..12736- >XLOC_038009 ID=XLOC_038009|Name=XLOC_038009|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1878bp|location=Sequence derived from alignment at sc0000495_pilon:10829..12736- (Clytia hemisphaerica_ch_hm2_pilon)
CAAACGCGCATCCCGTACCTCGACATCATTTCGAAGACCGAGTCAACTGC
ACCAAACGCGCATCCCGTACCTCGACATCATTTCGAAGACCGAGTCAACT
GCACTTAAAATCAAATACGCGACCAAAGAAGATACAGTACCAATGAAACT
TCGACAAGACGTGTTGCGCGATCTTAAAATGACAAAACCACCTAAAAACA
ATCTCAATTCTCGACAACGAAAAGCACTCAAAGAACTTAAATCCGATAAC
CAGAATGTTATTTACCCATTTGACAAAGGTGCTGGTCTTGTTAGAATCGA
TAGAGATGATGCTATCGCGAAAATCGAAGAACAACTCGGCAACACGGAAA
TCATCACACAAGATCCAACATCGACATTGGCACGAAAGTTTCAGAATACA
CTTCGACCCCTTCACCAAGCTGGGAAGTTCACTGATAAAGAGTACAAAAA
ACTGTATCCATCCGATCCGATACCACCTCGAATGTACGGAACCATCAAAG
CTCATAAACCGGAAAAGAATTACCCTATGAGAGTGGTAGTTTCAACTATC
GGTACTCCATCGTACGGAACTTCAGAATACCTTGTGAAAATTATTCAACC
AACTCTAAACAAAAACAACACAAGGCTCAAAAACTCGTACACATTCGCTG
AGCTCACTAGATCCTGGGACGTTGACCCCGATGAAATTCAAGTGTCGTAT
GACGTAGTAAACCTCTATCCGACAGTACCTGTAGAGGAAGCTACTAACAT
AATCGTCCAGATGCTTGAAAACGATCACGACCTACCAAACAGGACAAAGC
TAACGGTTGAAGACATCCGAACTTTGATTGAACTTTGGCTATCGAAATGT
TACTTCCTGTGGAATGATAAACTGTACCGACTTCAGAATTCGGCACCGAT
CGGTTTAGCACTAATGGTCGTAATGGTAGAAGCTTTCCTACAATATCATG
AACAAAACGCACTTCAAGCGGCCAACGCACACGATCCTCCTTTAAAATCA
AATACGCGACCAAAGAAGATACAGTACCAATGAAACTTCGACAAGACGTG
TTGCGCGATCTTAAAATGACAAAACCACCTAAAAACAATCTCAATTCTCG
ACAACGAAAAGCACTCAAAGAACTTAAATCCGATAACCAGAATGTTATTT
ACCCATTTGACAAAGGTGCTGGTCTTGTTAGAATCGATAGAGATGATGCT
ATCGCGAAAATCGAAGAACAACTCGGCAACACGGAAATCATCACACAAGA
TCCAACATCGACATTGGCACGAAAGTTTCAGAATACACTTCGACCCCTTC
ACCAAGCTGGGAAGTTCACTGATAAAGAGTACAAAAAACTGTATCCATCC
GATCCGATACCACCTCGAATGTACGGAACCATCAAAGCTCATAAACCGGA
AAAGAATTACCCTATGAGAGTGGTAGTTTCAACTATCGGTACTCCATCGT
ACGGAACTTCAGAATACCTTGTGAAAATTATTCAACCAACTCTAAACAAA
AACAACACAAGGCTCAAAAACTCGTACACATTCGCTGAGCTCACTAGATC
CTGGGACGTTGACCCCGATGAAATTCAAGTGTCGTATGACGTAGTAAACC
TCTATCCGACAGTACCTGTAGAGGAAGCTACTAACATAATCGTCCAGATG
CTTGAAAACGATCACGACCTACCAAACAGGACAAAGCTAACGGTTGAAGA
CATCCGAACTTTGATTGAACTTTGGCTATCGAAATGTTACTTCCTGTGGA
ATGATAAACTGTACCGACTTCAGAATTCGGCACCGATCGGTTTAGCACTA
ATGGTCGTAATGGTAGAAGCTTTCCTACAATATCATGAACAAAACGCACT
TCAAGCGGCCAACGCACACGATCCTCCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000495_pilon | genome | sc0000495_pilon:10829..12736 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 604-1488:886 |
| Aaloc | 550-600:1909 |
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