XLOC_038006.2 (mRNA) -

Overview
NameXLOC_038006.2
Unique NameXLOC_038006.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000008_pilon:1309709..1310686+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038006.2 ID=XLOC_038006.2|Name=XLOC_038006.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=978bp|location=Sequence derived from alignment at sc0000008_pilon:1309709..1310686+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGACAAAAAGTTTCAAGTTCACTCATCCTGGGATTGACACTcccaa gaaaatttttaaaaaagacgCTTACAGAAATTGCATCATTTGTGGAAGTG ACATTGTTTTGAAGAGCCTTCGCTTTACTACATTGAAGAAAACATCCCTT AAAGAAACTTTGAGTGAGGTTGTAGACTTGAGCAAGTTTGATAATGAATC AAGGGCATGTAAGTCATGCACAACATCAGTAGAAAATCTTCCAAAACTTA TCAACAGATATAGAGAGGGAAAGAAAAAGATTATTGAGAAATTCAATGAG ACTTGTGATAAATATCCACCAGGTCAAGTTTCAGTTAAACGTTTAGCCAA ATCTCAATCACCTGGAAGAAGTCCATCATCAAAATCTTCCATATGTTCCA GTAGGAAACGACTTTGCTTAGTTCAGGGAAATGCAATTGGAACATTGAAG AGCCGCAGAAAGTTGCCATTACCAGAGAAGAGAACATCagaatctgaaaa agaaaacattgtttTTGCTATCAATACAATCAcggtaaaattttaaaaca tgatttttttttttttttcttggaaaatttacGGTGAAGTAACTTTCATC ACTAGTGGAAATAAAACTTGCATTACCCACCAGTTAACTCTATGTAAAag ttggtcattaaaataatgagaggtagatttttttatattgtttATAATCT GAATTTTGTCCTTGCTGATATAAGTACAATAtagttaaaaaagtttaaaa tgggaaattataatttttcagagttcttttgtattttttttaacttcttt AATCTGCTATGACCTGTATGAAATAATATTTATAATACCTTTTCATCTTT TGTCATGTGTGCAAAGTTATTCTATATAACAATATTCATTTAATTTGTAG GGAAACCCAATAGTAGAATCAATAACGTCAACCAAAAATGAACACTTGGT TGGTAGTAAACGCTCAAAGGTATGTTAA

Coding sequence (CDS) from alignment at sc0000008_pilon:1309709..1310686+

>XLOC_038006.2 ID=XLOC_038006.2|Name=XLOC_038006.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1224bp|location=Sequence derived from alignment at sc0000008_pilon:1309709..1310686+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGACAAAAAGTTTCAAGTTCACTCATCCTGGGATTGACACTcccaa
gaaaatttttaaaaaagacgCTTACAGAAATTGCATCATTTGTGGAAGTG
ACATTGTTTTGAAGAGCCTTCGCTTTACTACATTGAAGAAAACATCCCTT
AAAGAAACTTTGAGTGAGGTTGTAGACTTGAGCAAGTTTGATAATGAATC
AAGGGCATGTAAGTCATGCACAACATCAGTAGAAAATCTTCCAAAACTTA
TCAACAGATATAGAGAGGGAAAGAAAAAGATTATTGAGAAATTCAATGAG
ACTTGTGATAAATATCCACCAGGTCAAGTTTCAGTTAAACGTTTAGCCAA
ATCTCAATCACCTGGAAGAAGTCCATCATCAAAATCTTCCATATGTTCCA
GTAGGAAACGACTTTGCTTAGTTCAGGGAAATGCAATTGGAACATTGAAG
AGCCGCAGAAAGTTGCCATTACCAGAGAAGAGAACATCagaatctgaaaa
agaaaacattgtttTTGCTATCAATACAATCAcgATGTCGACAAAAAGTT
TCAAGTTCACTCATCCTGGGATTGACACTcccaagaaaatttttaaaaaa
gacgCTTACAGAAATTGCATCATTTGTGGAAGTGACATTGTTTTGAAGAG
CCTTCGCTTTACTACATTGAAGAAAACATCCCTTAAAGAAACTTTGAGTG
AGGTTGTAGACTTGAGCAAGTTTGATAATGAATCAAGGGCATGTAAGTCA
TGCACAACATCAGTAGAAAATCTTCCAAAACTTATCAACAGATATAGAGA
GGGAAAGAAAAAGATTATTGAGAAATTCAATGAGACTTGTGATAAATATC
CACCAGGTCAAGTTTCAGTTAAACGTTTAGCCAAATCTCAATCACCTGGA
AGAAGTCCATCATCAAAATCTTCCATATGTTCCAGTAGGAAACGACTTTG
CTTAGTTCAGGGAAATGCAATTGGAACATTGAAGAGCCGCAGAAAGTTGC
CATTACCAGAGAAGAGAACATCagaatctgaaaaagaaaacattgtttTT
GCTATCAATACAATCAcgGGAAACCCAATAGTAGAATCAATAACGTCAAC
CAAAAATGAACACTTGGTTGGTAGTAAACGCTCAAAGGTATGTTAAGGAA
ACCCAATAGTAGAATCAATAACGTCAACCAAAAATGAACACTTGGTTGGT
AGTAAACGCTCAAAGGTATGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038006.2XLOC_038006.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000008_pilongenomesc0000008_pilon:1309709..1310686 +
Properties
Property NameValue
Aaloc535-612:901
Aaloc1-534:1