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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000277_pilon:60046..68387+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038001 ID=XLOC_038001|Name=XLOC_038001|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8342bp|location=Sequence derived from alignment at sc0000277_pilon:60046..68387+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAGTACCAAAGTTTTACAGATGGTTGTCAGAGAGATATCCATGTCT
CAGCCAAGTCATCAAGGAACATCAGGTTTTAAATCTTTccataattcatt
tttttcacatcACTTATATCactatttttaaattaaatcttTTAGAACAA
TTAATACCCTAAGTTTGTCAATTTTTAACTACCCTGACCCCCCTAATGAG
TTTCTTGCCCTCCTTTGAAGAAAGGAAAGATACAAAGATATCATATGGGG
CTgaagtgaaaaaatttcttgtttatCGTCACCTAATCCTAGGTTTTGGA
GGTGGGAtttgggttggaaaattttttatctgatTAGTTCAATTTACATT
TGggtaattttgaaatgaaaagcgAAGAGCTTGAAGGGAATTTACGATAA
GTAGGTAGGTAGTCTTTCTTACAGAAATCtaattgtaaatattttgaatt
acCATTTTGATGACTTATTTAAAACTATCACACAATATCTTACTTCCAGA
AAGCCATACGAGCATGAATCTGGTAATATCACCCAAATAggtgaaaattt
ttggaaaaaataaagttttgaatttcacttttattcctggataatctttt
tattaatgacttcaattttcagaaaacataaatATCAGGGCTTAATCAAA
CTGGCTTGGTCCAGAAATTTTACCTAGAGTAGTTATAATcagacaaattt
ggcaaaaaactctttttagTTTACACTTCATTTGAGATAAAATATGCATA
ATCTAATACTTGTCTTAGATTTCAGTCCATGGCTAATATAATAAGCTgca
ttgaaaagcaatttttaccgTCCAGtatgacatatttttcaaattctgac
actttttccAGAAGAATTaatctaaaatactaaaaaatattcccataaag
tttgacttcatgaaaagaaaactggctaTGATCAGGTAACttcattctag
atttgaaggacCCATTATAAGCTttcaaaaaaaccaaaagtttgctatat
ttcagttgatcaataaaaaattagaaaatgaaaccttgttggttgcggac
ataactttttgtcaaatttactttaaaatcagcaataaacattaaactga
gtaattatttggcttttaatactttgctgtacttgaaccaaaatttaatc
attgaaatttgttgtcttgaaaggtctttgtaactatgatttcctgaaaa
ttgaagatttatctgtaaaagagaatccaatcatatatatcattttttgt
cataatctaattttaaaagtgaaattttgagcttgacATTAACTGTTGTA
CATCTTCATAATCagtaaatatgatatttccttGAAAAGCCACTCATCCT
TTTCAATAGAAAGGGTTAAATGGGTAATAATgctatgttgcggacataac
ttttttacTTCCAGGGTAGAACCATAGaacattttacatcattttattta
aaattttggagtgtctttttctgttaccaaaatttaaggaatatttgaga
ctaaatcaatataaaaccaaaagatttggtttggtttgatttcagttatt
acatgtttttctttgaaaagaacaaaagaagactCAACAATGATATTAAA
ACTTTCTAATATTTCTAGTAGAATAACGACCCtagaggacacaaaaaatt
gaaaagcaaGGAAATGCACGGTACTCACAAATGTAACTCTTTAGTATTGT
CAAAGTGTTAGCATAACTGCTTAAGAGGgttaaaaatctgataaatactt
taatagttatgtccgcaacatacaaTTTGCTACAGAATATGACTCTGTTT
TGAACTATTGGAGCAATTCTAACTAGTCTGTAAGTGAATGTGTAGTAGAT
TATGTTGTGTGAACACTACACAATGGATTTAATATGCAAATTAATGCATA
ATTTATCCTTTATTCAAGCTCACAGGTTcagaaccatcattttcaaagaa
acaaaaagtttatttttctgttaaaattttcattttggaccttaacttgg
catcagagtatttgttttctatttctaatagcctaagcattacttccata
taataaaacatcatgccagcttgcaaatacacttgatcagcaacatttta
gacaaaatagttatgtccgcaacatgaaATACATATGAAAGAGGTAAATA
AACTGGAAATCTTGCCAATAGAaaattatgaaacttttttctagTTGTAA
CCAACTTAAAATGACCTTAGAtgcaataatttgtcaaagaaacctaaaat
TGGTGTTTGGAGATTGAGAAAACTTCATgctttgttgcggacataacttt
ttgttgcggacataactgatttttggagaaactgTTTTGTTTCACTGTCT
CCCAATAAATAGCCTTTTagacttcaaatttgtataaaatgaccCCAAAT
GTAACCCTTGACatagaaaaatgattcagcTGAGTAAGGATAActccttg
aaaaatttaaaggattaaatagtgtgcggacataactcaaAAATGTGAAC
GGAAACAAGACACTGTtcacttcaaaataattttaagcGTTGACCAAGAT
AACTGCCGtttttttGCAACTTGCTCTAGTTTCCCATTATCTGGGAAgaa
tttaaaatgtaaaaaccaGTGAGCTAaagcttttcaatttttttctgtgt
caaatctgtgcggacataactttgtgaacggaaaaagttatgtccgcaac
atttttgactttatatgccaaaaaaactttttttggcggtacttactttg
tttttcatttttcatattctCTGGCTGTGAGAACAACAAAAACCAAGCTG
GAGAAAGCATGTTGTTGATGAATTATTATACAATGATGttgatcattttt
tttaaaaccttattttccgttcacattttgaaagaaagccCCCTCTAGGA
AAATTTGAGTACCTGTTATATCAGAAAAAATGACTGTTTAAGCTTGCCCA
TGTCAAGATTGACCAGAAACAATAAGATTTGATATGACTATATACCTATA
GAGATTTCACCAAAGCCTCAAAGTAGGAAAACTAATAAATCGAAAAGTGG
GCCACATTACCAGATTCATGCTCATACTTACAATAGTTTTCAATCTTTAT
GTTAATTTTTACAATTCACAACTCTTGCATTGCTTGGGTATCTCTTTATG
AATTGATGGGAAACACATTTTATTGTATTTACTTTTCTATTGTTGTAGAT
TCCAGAATTTGACAATCTATACCTGGACATGAATGGAATCATTCATCCTT
GCTCACATCCAAACGATGACGACCCACATTTTCGGATTACAGAGGAACAG
ATCtttcgaaatattttcaattatatTGAGGTGAGCTAAACTGTTGCAAA
TTCGACTCGTTATCAAATAAACTGCTTGATACTTGATAGAGCGAGCagtt
tatataaaaaatgaatagacaattttttttaatccttCTGAGCTTTTTGC
AGTTTCAGACAGTTTCTAGTCAGATTTCTTTGAGGTATCTTGAATAAGTA
TCCATTTTTCATATTTGGACCTTAGCCTCACAATATGATATGGGTTCTCT
GGACCCATATGGActttaaaaaatgtcttttatGCGTTGATGAGTTGAGA
ATGTTTCCTTGTTTGGTTCACTGTAGGTTTTGTTCAGAATCATCAAACCA
AAGAAGAACTTCTTCATGGCTGTTGATGGGTGTGCACCAAGAGCTAAAAT
GAATCAACAGAGAAGTAGAAGATTCAGGTAGGCTTCACTTACTTACTTAT
GAAGGGCCTAGTTTTGTTTATACAAACCTTTGAAGACCGTTTGAAGTTTT
TGTCTCCAAACATGTCAGATCTGAATTCATAGGGAGTTTTTGGTTTATCT
CACTAAGAATAATGGTGAATAAAAAACCTTTTGGTCAGTTTAAGTGCTCA
AATGCATCACATAAGAAATCGTAAAGGGATGatgtaaaactttaaaattc
aaGATCTAAACCTTTCTGTATAAAAAGAATGAATTGACTCTTTCAGGACT
GCAAAAGAAGCAGAAAATAATATTCGAAAAGCTCAAATGAAAGGACAAAC
TCTACCAAAGGAGGAACGATTTGATTCAAACTGTATCACACCAGGTATTA
TTTCAAACTACATCCAAATGAGCTAAGTCCATGGACTGGAATTTTTCCCT
TTCCACCAgtagaaaaacctttttttaaggTTCTGATCTGATAAATCAAA
ACACCCAAACTCAGTCCGCTCAAAATAAGGTACAATTGGACGATAACAAT
TCTGATTAAAAGCAATTCTTTTTACATTGTTAAGAGCAGACGGCATAATA
CAACCttctaaaaattgtaaatgttCATTAGTCAATAGTTCAACATCATA
ATGCTTACTATTTCTGATGCACTTCTCCTTCAGGAGTTCCAAGATTTGGC
GTCGGACGGttttttttCGATTGTACGGCTCCCTCTGATCCCTCTGATAT
TGTCTCCTTTGAAATCCATTCGTCATAACCTCGTTTACGTTTCGTCTCAA
TGGGCTTGAAGAAATCAAGCTTAACTCGGTCAGGGAAGCCCACTCTCTCA
CGGATGACATTCTGGCGGTTGACGGACATGACGGCGAGACGCTCGAATTG
CTCCTTACCATGTACTCTTCTTCAGAGGACGTAATTGAAACAATTCGTAA
TCGCGGACGTGCCAGTCTTGAGGAAGAGGGATAGGTTGAAAGGGGGTGGA
CAGCAGGGACGTTTTCTTGTAACTCTCCGGAGACGTCAGGTTTTCCGTTG
CAGCAGAATCCCTTAGCCTGTTGCTGTGTGGAATAGGTGACACATCCTCT
ATCAACAGCTTTGGAGAACATGTCCTGGAGGTGCTGCCAGACGTATTGAC
GAATTGTTCTCCTATCCGTCTTCTCACGCCAAGTCCCCTTGTGACGGGTT
GCGCTGATAAGAAGGACGTCGTGTGTATGCAACTGGTTTTTAAGGGCATT
TTCGCAGGCGTATGCCGAGGTGTCGGATTCGGTTGACCAATGTTCGGCAA
CGAGTAACCTTTCTGCGTTGATAGCGTCGAGTTTCTTCTTCGAAAGATGG
AGTCCGGGGTAAATTGCGTGAATGATAACTGTAGGTGGTGTTGATACTTC
GGGGTTGTAGACATCGTCTAAATAAACAAGTCCCTTTTCTTGTATTGCAG
TGAAATGTAAAGCTAGCATCTTGGGGTTTGTGTGACCGGCTTTTAAGGCA
TCGTATAGATCGCTTTTCGACATGGCCTTTACCTCGTTAAAGACTCGCTT
GACCTGTTGAAAAATAATCACATCGTCAAGTTCCATACAGGGTACAATTT
CAAATTCGTATTGATAGCGTCTATTATCAGTATTATAGACTCCTTTCATA
TTAAATAGTTCTTTCGGGTTACTCattttaaaattccaaaaaaatgaatA
CATAATGTTCAAATAAGCGAAGTAGAAGGCTGCATCAAAAGTAACATTTC
GGCCTTCGTCTAAGATATTTTTACATTCTTCTGACCCATCGTCTACTGTA
TCAATTAAATAGTCAATGTTTCGCATAGATACGTTACTTTCTAATAAGAC
ATCATCAATTGCAGGAATATAACTAACCTCTTCGTCTGCAACAAGTTTGT
CCATTTCAGCGTCCATGTTAGGAAAATCATCGTCCATAAGGTTTTCAGGG
TCTTGGTAGCATTCATCATCAACGATGTCTTGTGTCTGCTTTAATTCTGC
CATGTCTGCTTCGTTATGAGGTTGAGCGTTTGGATAAGCGTCTTCCCAAA
TTGTTGGTATCCAGTAGTCGTCGAGTGATATCTTTACGGTTTCCCACTGA
TAAttcatttgattgaaaattaaaaagtctaATAATAATTCTATGAGATC
TCATAGTATAATTATGTAATACCGTATGGGTTCCGGTAACGATTCGGGTA
CGGGCCGGGGTCGGTAATAATGTCTTATTTTAGGTACTTGCGTCACCTAT
TGTTCCCTCGAGATTAATACCCCCGGATATGTCTAGAATCATCACCCCCG
ATTTTGTCTGTTATTTATGATTGATTCAAACTGTATCACACCAGGTATTT
TTTCAAACTACATCCAAATGAGCTAAGTCCATGGACTGGACTCTCCACCA
gtagaaaaacctttttttaaggTTCTGATCTGATAAATCGGTCTCAGTAT
GCTTTATAACGATCTCCATCTCTTCATATTTTTCTCTCTACTTTTTTGAA
AGGTACTGAATTTATGGCAAGGTTGAACAATCAATTGAAATACTTTGTCA
ACATGAAGATCTCAACAGATCCAATGTGGCAAGAATGTACCATTTACTTG
TCTGGGCATGATGTAAGTTGTTCCAGAAAAAATTAGCATATCCCGTTGTC
AAAAACATGTTATATTGGAAGGTTAATCCAATAGATTTTTGACCTGTTTC
TGGAAACTCCCCAGAAGATCACTTTAAGTACACAGATAGGCTAGATGTGA
CAGTTTTAGCAAATTGTGCCTCAGAGAGTATGATGGAGTGCACAGTAAGA
AGAGAGAGATTACCAATTGAAAAGATACCCCATCAAGATGAGaatgtttg
aaaatgtttttcaggTACCAGGAGAGGGAGAACACAAAGTAATGGATTTC
ATTCGGTATTGCAAAGCACAACCTGGTTATGATCCTAACACAAGACATTG
CTTGTATGGTCTTGATGCTGATTTGGTAAGCCCATCAGACCAGATGTCCG
TTTTTAccctaattttgaaaaaagatggAAAAATCGTCTGAAGCCTTTTG
CTTTCTTCCTTGTTCTCATAATAACTATCAAATATCGACTTTAACACTTT
AACTTACTCTTTAATTTATTCTCAAGCAATAGGAGTAGAATGCTTTATTT
TGATACATGTTCTTTACTTATCCAAACTCTAAATTATTACCAAGTATCAT
GAAATTCCATTTCCTCTTCAGATTATGCTGGGCTTGACCTCCCACGAGCC
TCACTTTGCTTTACTTCGAGAAGAAGTTCGATTTGGTAAACAAGCTAAAA
GGATAACGAAACCTGAACAACAGACCTTTCACTTGCTCCATTTATCACTT
CTACGagaatatctcgagtttgaattTGGTGCTTTAAAGGTAAGGCTTGT
TTTCGATGACTCACACAATTTTAgctagtaagtaagtctgcgaccgcagt
cggaggcgacccgaaggctcctctttcgatagctatctacccgaaggtag
gggagggcgccactctttctccctggatttctccacttacccttgatcct
tctcttagttactgagcatcaagcagagaggcatcaagtaccattttggg
aatctttggtatgacccggctgggggttgaacccacaaccttgcgaaccg
tagccggatgctctaccactgtactacggtcgctattTTAGCTAATCTat
ctttaaaagtaaaattttaataaaaacaatcaaaggaatatatttcagtc
attaaaaaaattaaaatcactaATGACAACGTGTTTACTTCATTCCTGAA
AGTTCACAGAAGGAgagttaaaaactttttcttttcttcttagaGCAAGC
TCCATTTTCAGTATGACATTGAGAATATCATTGATGATTGGATTCTCCTT
GGCTTTCTTGTCGGAAACGATTTCGTACCTCATTTACCCAACTTTCATAT
TAACCATGATGCATTGCCATATCTGTACggtgtttacaaagattttctcC
TCACCACGGATGGTAAGTAGTTTTTCAGGTTTACTAATCCTGATCGGTTT
GAACATTTTGGggtaaaaaatattaatttttttgaagccgTATTTTCAAA
TTGCattcaatttatttcaaatcATGAGAAATCTGacatttgattttctt
cttttaaaccAGGCTATTTGCATAACGGTGGATATATCAATTTGCATCGA
ATGAAAAAGTTCTTCGAGTTTCTAAGCAAGGTAACATGGTCCATCTTTAT
AATGTTTCGAAATGCGAGATCGAATTTGATATAAGATTTTGATAACgaaa
atcataacgtaaaaaggaaaaattagaactgttcgaaaagaaaaaaatta
tattctagTACCCTAGTAGTCAGAAATGGTTCAGGTTGAACTGGAATATT
CAATCCATGGTTAacgatgaaaataacaaaaaaactgaatttgataaaaa
caaGTAAAGTTTTCAAGTTTGCATATAGTCACTTTACCCTCTTTTTGTTT
GTGTAATTTTCAGTTCgatttgaacaattttgaggaaaagtatGAGGACT
TTAAATGGTTACAAAGCAAGAAAACGGGGGACATGCTGGAAGATTCGCAC
CAAAACAATCCCAGAGGGACACCAAATAAGAGAAGGGTGAGC Coding sequence (CDS) from alignment at sc0000277_pilon:60046..68387+ >XLOC_038001 ID=XLOC_038001|Name=XLOC_038001|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2322bp|location=Sequence derived from alignment at sc0000277_pilon:60046..68387+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAGTACCAAAGTTTTACAGATGGTTGTCAGAGAGATATCCATGTCT
CAGCCAAGTCATCAAGGAACATCAGATGGGAGTACCAAAGTTTTACAGAT
GGTTGTCAGAGAGATATCCATGTCTCAGCCAAGTCATCAAGGAACATCAG
ATTCCAGAATTTGACAATCTATACCTGGACATGAATGGAATCATTCATCC
TTGCTCACATCCAAACGATGACGACCCACATTTTCGGATTACAGAGGAAC
AGATCtttcgaaatattttcaattatatTGAGATTCCAGAATTTGACAAT
CTATACCTGGACATGAATGGAATCATTCATCCTTGCTCACATCCAAACGA
TGACGACCCACATTTTCGGATTACAGAGGAACAGATCtttcgaaatattt
tcaattatatTGAGGTTTTGTTCAGAATCATCAAACCAAAGAAGAACTTC
TTCATGGCTGTTGATGGGTGTGCACCAAGAGCTAAAATGAATCAACAGAG
AAGTAGAAGATTCAGGTTTTGTTCAGAATCATCAAACCAAAGAAGAACTT
CTTCATGGCTGTTGATGGGTGTGCACCAAGAGCTAAAATGAATCAACAGA
GAAGTAGAAGATTCAGGACTGCAAAAGAAGCAGAAAATAATATTCGAAAA
GCTCAAATGAAAGGACAAACTCTACCAAAGGAGGAACGATTTGATTCAAA
CTGTATCACACCAGGACTGCAAAAGAAGCAGAAAATAATATTCGAAAAGC
TCAAATGAAAGGACAAACTCTACCAAAGGAGGAACGATTTGATTCAAACT
GTATCACACCAGGTACTGAATTTATGGCAAGGTTGAACAATCAATTGAAA
TACTTTGTCAACATGAAGATCTCAACAGATCCAATGTGGCAAGAATGTAC
CATTTACTTGTCTGGGCATGATGTACTGAATTTATGGCAAGGTTGAACAA
TCAATTGAAATACTTTGTCAACATGAAGATCTCAACAGATCCAATGTGGC
AAGAATGTACCATTTACTTGTCTGGGCATGATgTACCAGGAGAGGGAGAA
CACAAAGTAATGGATTTCATTCGGTATTGCAAAGCACAACCTGGTTATGA
TCCTAACACAAGACATTGCTTGTATGGTCTTGATGCTGATTTGgTACCAG
GAGAGGGAGAACACAAAGTAATGGATTTCATTCGGTATTGCAAAGCACAA
CCTGGTTATGATCCTAACACAAGACATTGCTTGTATGGTCTTGATGCTGA
TTTGATTATGCTGGGCTTGACCTCCCACGAGCCTCACTTTGCTTTACTTC
GAGAAGAAGTTCGATTTGGTAAACAAGCTAAAAGGATAACGAAACCTGAA
CAACAGACCTTTCACTTGCTCCATTTATCACTTCTACGagaatatctcga
gtttgaattTGGTGCTTTAAAGATTATGCTGGGCTTGACCTCCCACGAGC
CTCACTTTGCTTTACTTCGAGAAGAAGTTCGATTTGGTAAACAAGCTAAA
AGGATAACGAAACCTGAACAACAGACCTTTCACTTGCTCCATTTATCACT
TCTACGagaatatctcgagtttgaattTGGTGCTTTAAAGaGCAAGCTCC
ATTTTCAGTATGACATTGAGAATATCATTGATGATTGGATTCTCCTTGGC
TTTCTTGTCGGAAACGATTTCGTACCTCATTTACCCAACTTTCATATTAA
CCATGATGCATTGCCATATCTGTACggtgtttacaaagattttctcCTCA
CCACGGATGaGCAAGCTCCATTTTCAGTATGACATTGAGAATATCATTGA
TGATTGGATTCTCCTTGGCTTTCTTGTCGGAAACGATTTCGTACCTCATT
TACCCAACTTTCATATTAACCATGATGCATTGCCATATCTGTACggtgtt
tacaaagattttctcCTCACCACGGATGGCTATTTGCATAACGGTGGATA
TATCAATTTGCATCGAATGAAAAAGTTCTTCGAGTTTCTAAGCAAGGCTA
TTTGCATAACGGTGGATATATCAATTTGCATCGAATGAAAAAGTTCTTCG
AGTTTCTAAGCAAGTTCgatttgaacaattttgaggaaaagtatGAGGAC
TTTAAATGGTTACAAAGCAAGAAAACGGGGGACATGCTGGAAGATTCGCA
CCAAAACAATCCCAGAGGGACACCAAATAAGAGAAGGGTGAGCTTCgatt
tgaacaattttgaggaaaagtatGAGGACTTTAAATGGTTACAAAGCAAG
AAAACGGGGGACATGCTGGAAGATTCGCACCAAAACAATCCCAGAGGGAC
ACCAAATAAGAGAAGGGTGAGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000277_pilon | genome | sc0000277_pilon:60046..68387 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1033-1161:8214 |
| Aaloc | 967-1032:7865 |
| Aaloc | 796-963:7544 |
| Aaloc | 628-795:6922 |
| Aaloc | 517-627:6565 |
| Aaloc | 409-516:6205 |
| Aaloc | 310-405:3998 |
| Aaloc | 208-306:3627 |
| Aaloc | 76-207:3199 |
| Aaloc | 1-75:1 |
|
