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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000277_pilon:96603..104224+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037999 ID=XLOC_037999|Name=XLOC_037999|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7622bp|location=Sequence derived from alignment at sc0000277_pilon:96603..104224+ (Clytia hemisphaerica_ch_hm2_pilon) atgagaaattacATAGACAGAATTTTACTGAAAATCAACGAAGGGCGTGA
CCCTGCTGCATTGGGTGTTCTTCGATTTTGCTATGGTAAGTGATTATTGT
TTTCCATTCTTGTTTAAACCGATGTGATACTTTTTTCTAGGAAATATTCA
AAACGAATTCGTCAAAGATGGTTGATATTTCTGAACTTTGATCAAATGAT
TAAgaattattgttttaaaaatggaatagatttttcaaagcgattctttt
aaaactatatcgaatttttattttccgtTTTCGAAGAGATgcttaaaatt
tccatttttcccAAATGACCAGTTTTGGTGATCACTTTCACCTACCGAAC
GTTCtttttttGTTCCAGGACTTTTAATGATTATCGACATTTTTGACGAA
CGTGGTTTGTCTCGATTACCCATCAAGCATGGCGACCCTTCATCCTGCTA
CTTCCCGCTATTCGATAATATGCCTCGATTATCAATCGAATATTTATACT
TAGTATATCTggttttgctgatgtcagcatttggGATAATGATTGGGATG
TTCTTCAAGTTgtcttgtttttgtttcatgTCTTGTTATTGGTACATCTT
TTTCCTGGATAAAACTGTTTGGAATAATCATTCATATTTGTATGGATTGA
TATCCATCATTTTGTTGCTAAGCAACGCTAATTATTATTGGTAAGGCTCA
CATAATGAGAATTGAGTTTACCATCCCAGCCATGCGGACAGCGTTTTGCT
TTCAAAACTCGCTGGCAAAGACAACCGACAAATCTTTTAGACAACGATTA
TTTGTTATTCTTGATGACTATTCTTTACCAAAAGGTTTTAGgtattattg
ccgacccaaaaaaatatcagcgttttgattggtcgagagcatcgagatat
ttgcgatatttcatatttctttagtctggaaatatgaccgcgttgacttt
tgggggactgggtaagcggcgggagaaaaatcaaaacaaaacagccgaaa
agaactgactttcggagaaactgacttggaAATCAAAAGGGggaaacgca
acaaaaatatgttcagattaatttttactttggagttcttcaataaaaga
cactaaaatcaaatctgatgaactaagaatttattataaaacAACTTTTG
GCAAACTTGTCCGTGTGATagccaaacagttttttatcaatgcatacaaa
aaaacttgagattcttgaatgtttgccaataaaatttctcataacataac
aaggaaagtgtaatgtcttgtatttaaccaaatgacgagtgatttttata
aaagttctctcctaattctcgttctcgacaacaacgtagtctacgtcctt
gacttttcaactcaacaatcattatacgtcttccttctaaaattcgaaac
atttagagcttgacgataatcaagaaagtatccaaattgttttgctgttg
aaaaaatgttgttctttaaccatttttacaagcatacatttccatcatgg
gactcctttcctctgctattctttcccaTGCATGGCCATGTcaccgaaac
aaaaacatagaaaaagactgaatgttatcaatctgattaatctattgatg
gagggtttcttctctatcgaaaccatactgtacatcatctgcattttgaa
ttatcaatctagaaactttcaaatacatctctaaaaaatctgcaactctt
caaaacaaaacttctagatcgaaaatgatcgaaaaatgtttctctatttt
gtttttgtgtgaatatttttagcgggaagttatcgaatgttattttgttc
gaatctaacgttcgaattagattttcgaataaaaacattcgaaagtacac
agaagcagaagaaagcggaagtaagtttaaaaacaaaaagaggacaattt
ttttgagtcgacaataaattagttatcacatgacttctcgtgcaatactc
gatattttactcgttccgagattttaccgatatttttcctcgcctaaagg
ctcggaaaaatattacggaaaaatctcggaactcgtaaaatatttctcgt
attgcactcgaagtcatgcgataactagtacctATTTACGACAAAAAGTC
TGATAGAAACTAACGAAATACGACGATGGCTCACTTTTATgtttacctta
agagaagaattTTTGGCAAGAAGAATTTTTAGCTAATGAGCCCATTcgcc
aattttggtgcaatttggcgaaatttattttggcgatttaataaaGTTTC
TAAATTTGGCGATAATTATttttggcgaacgacccatttttgttcaataa
tttagctgaaaaaaaagaggaaaagaagggtttttaggagaaatgaagac
taaattgaaagaaaatttaatttggcgggaattctTTTTTGGTGAATGAC
CTatgaatttaaatttggcggagaGAAATATTGGCGAAATTTTTAGGTag
ttcgccaaattcgccaaaatttcttctcttaaggtatttACTATGTTGCA
AGCAAGCAATAAATTATTCACAAGTTATTTGACAGTCTTATTGTTGAATA
ATTCACTGGCCAGAAGTGACCAAACTTTCGGTATTTCGGGATCCTGACTT
TGGCCTTCCACTTTGGATAATACAGTTATCTTCTTTATTTTAAGGTCAAT
AGATGGTTTGATTTGGCCATCGATAAGAAATAAACAGATTCCCCTCTGGC
AATATGGGGTTGTCAGATTTCAAgtaagtagcccccccccccttcatttT
ACATCTACTAACAGTATTATGTTAAGACTTGAGCACGTGGTTCCAATTGA
AATTGTAGAAGTCTTCCCGTCCTTTCCACAATAGAGTTTTACTGGTTTCT
TTTCAAGTTATCTACCTCTCATAAATTTATGTCCCAAATTTGCGATTTTC
AAATTCCTTCATTTATATTTCATATACTGAAATCCATCCACGATCAGATT
GCACCATTTTTGGTTTCCGCCTGGAAATCACCCTCAAAAGAATCGATCTA
ATTTTACTgtttccgtctcagacgaaatTCCGTCCCAGAAATGTATAAAA
AATAGCATTTACCACAAAATTCAACGAAATTTTATTAAGAATCTGACATT
ACTTATGGGTGGAAAGCCAATTTCAGGTTACTTTAGCCACTGCTTATTAC
ACATTTAGTTTTTTAAACCAGTGAACGATTCAATTAATCAAAGTCTCAAT
ACTTATGTAAATGAGAGTTAGGGGGCTGTATCAATGCTTTTTCTACTTAT
AGGTTTTCCTGTTATACTTTTACGCCGGTCTGAAGAAGCTGGATCGTGAT
TGGATGACAGGCTATTCCATGGTTGGCTTATCGAGGGAATTCGTCTTCGA
TCCTTTCCGATCGTTTTTGACGAATGAGCAGATTGATTTTTATATGGTTC
ATTGTTGTGGCTTGATGTTCGACCTGGTCCAAGGctttatgttgtttttt
gataCCACTCGACCAATTGGTATGTATTGGTTTGGCTTTCATGTAAAGAT
TTAAGAAACGTCTTGATAGAATGtaccttatcgggaaaaaaaatgtgttt
tatttagttggttttttttttcgtcggggaaaaatttcgtcacctagagg
catttccGTCACTTTTCTccgacaaaaatttcaaattcatcacttccacc
cgactaaattgtccaaaagaaatgatttccttcactagctcgaaaataga
tcttgtaattcgacgtttaaagcactaatttcggtaaataaaggtgtaaa
aaaattagatttgaattttggttgcggtataaaagttcgggtaaatgttt
tggtcggggataaaaaaatcgggtacaagttttggtcgggtgataaaatg
tcggggaaatatttcgtcggggaaaatttcgtcaccccctcaaaattttc
gtcactttcccccgacattttttccccgataaggtatacaatAAAACCTC
CAATAAATGGCCACTCTAGCCAAGCGGATAACTCTGATAAGCGGAAAATC
CTATTTTCCCCGGCCATTTCCTAGTCAAAGCCAAACGTATCCACAAATTA
GCGGACCAAAGTTTAttgcacgaaatggccaaaactatACTTTTTCCTCT
CTATTTAGCGTCATCGACGGTCAAAATTTTCACAGACTTTCTAAAAGATT
AGACAGGATTGATTTAATCAAACGTCTTCATCTCTTTACCTCTTTCGCTA
GGTTTCTTTTTCGGTTACAATTTTCATATCATGAATGCAGTGATGTTCAA
CATTGGTATGTTCTCTTACATGTGTATGGCTGTCATACCGATATTCTGCA
GACCGGAATGGCCaaagaaaatcatcaaaatgttACCGTCGTTCTTACAG
AAAGTCTTACCTATGACTGAAGATTCGGTGGACAATAAATCATGCACATT
GATTGAACAACCTCCATCCAAGAAGAAGAAACTGAAACCAAGAAGTTGGA
CTTGGAACAATCTGTTCATGAATTTACTATGTTTACATTATGTTGCAGCA
CAGTTATTCTTACCttattctcatttcttgacaaaGGTAAAGTGATTTCC
ATTTCCCTCTTCTTGACATGGAAGGTTTTCCTACATTCTACAAATATGAC
GAAAAATCAGAACTCGAATAATATATCCCATATatcccactcgattcgtt
acctttgagaaaactgggaagtacattagtgcaggatccgttgattcatt
acccataagtaatacgcacttgatttcacacagTGACTGTTGATGGACTA
GTTGTCCGAGATCGGAGCTCCGTTGGGCTAATGCCTCTCCCCAATGTACA
TAGCTTAACAGTTCTCTCAAAGTTAGCGTGTTGGTTGGGGATTGGACACT
AGCTGTGTCTCAGTTCGTGGCAATTCCATTGATTCGTAGAATTCAGGTAC
CGGATGGTGAACATTGAGCACATTGTTCCCCTCGTCTACTACGAACTAGT
GTAATAGCAACGAACCGATAGCgcagttgggagagcaatcgcccggcaag
cgagaggtcgtgggttcaatccccactcgattcgttacctttgagaaaac
tgggaagtacattagtgcaggatccgtcgATTCATATCCCATATTGTAGT
CTGTACCGTGTGATAACTGTTATATATTTATTATCTCTCCTATGACTAAT
CTCCATCTCCCAGTGTTATCCCAGGCCTTTTCTTTAAGGCTGCTATCGCT
CTAAAACAGTTAGTGACAGCTTAGACATGATTTCAAGAtacattattttt
ttgcttcaaCAGGGCTACAATTCATGGACACAAGGTTTATACGGTTACTC
ATGGGATATGATGATCCATTCGTGGAGTACACAACACGTGGTCGTCAAGG
TTACCGATCAAATAACAAACAAAGAACAATATCTCAGACCTGGTGTAAGT
TGACAAGCAGTAACGGTCGTTTTCTGTTCGCTCTACTTTGCCAACTTTAA
TCAAGTTTCAATCCCTATATCCCTACTTTCATTGTGGGAACCAAATTAGt
tattttgaaatctaggtAAGGGTTACGCCGGCAAGCTATGAGCTAAATAT
TCGATGTTCGGTATCAAATATCACGACAACTTTTCATATGTCTTCAACCG
CATTACATCTTTGATCATCatttgaacatattttttaggcatttttcCCA
TACGGAGATTCAAAGAATCGTATCTTCTCACATCCAGACATGTTGAAACA
ATACGCAACTTGTTTGGCTGATCGAGTCAAAGGAATGGATGAACTGGGTA
TTCAACATCCACAAATTACCGTGGATGTGTGGAAATCCATGAATGGTCGA
TACCAACAACGCATGGTAGATGAGTTTTGTgtgaattttctttcaatttt
ttaccaAAGTTTTCGTGTGCTATTTTCTAAGCAATCTTTTGACTGATGAA
TGGTTTTTGTTGGCTTCTACACTTAGTTCACTTTATTTTCTTGTCAATCT
TTTGAAAAGTATCAATGGGAAAGAGGAATAAATAACTGCCCACTTCAAAG
TCTAGCAAGATAATTTTGAACTCAGACCAATTGGCTTATGGCGTACAAAT
GGCGCTCTCtcattcgattttcaaaaggaattggattttcattgaataag
gggATTTCGAATAGCAGAGCGTCCCtcactttcaatattatcgaataacg
gagcgtatcgaatagtacgaccttgaattagagagcgtcaatttcattta
aaattcatttctagCTTGATCCAACGGTGGACCTTGTGACTGCAGAATGG
GACCCTTTCACACACACCAAATGGATGCAACCTCTTCTTGTTGAGCTTTC
CTCATGGAGAAGCACACTTAAACAAATCCGTAATGCGAACTTCGAAGTGA
ATAATGCAACAGAGATTGTGTTCGTAGCAGATTTCCCTGGTTTGTCACTT
GAGAATTACATAGCACCTGAGATCAAAGCTAATGTGACTGTTCTCAAAGG
TATTACGTTTATGagaaattatttctttattcaGTTTTCACAGACTGTTT
ATGCCTTATTCAATTAACATTCATTCGTCAATCCTTGTGTGTAGTGTTGA
CCCCTTCAGTACGAGTAAGCTAGCGGTTGACCTTCTCCGGGGCTAGATTT
TAGCCGCTCCCAGAAACTGGTCCTTTTTTAACTTTCTTCACTACGACCTG
TTATTAAAACTTTGAGTGTAATATAAACCTTCCTTACTCCCGACACAGGT
GAAGTGATTGTCCAATCAGAACATGACCACAACACGACTGTCAAAGTGAA
CGAAACGTTGAATTTGGCGAGCGATGAAACCCACGTGATTCACACAGTAA
CCAATGATCCTTCGTGTTATATGTATGTTTACTACAATGAAAGTTGGGTT
GATAAAACTGATGAAGAACTATTGGCGTCTGATACAGGTATTCAAACAGC
CTTTTGCTGAGTATCATTCTCGATGTTCACGATGTGAGCTTTAATCGAGT
ATTTCGTGTTCGAAATGaattatgggtaatcaggactgattgcgttCTAG
TAACAGCTTCCCGTCGGTTAGACGCAAAAACATCGAACATTTTAGATCAA
CAGAAAGCCGATCTTAGAGTGTCGTGATTACCCGCAGTTCCTTTCAACCT
TCAATCTTTCAACCATGACAGTCGATAAAGGTTTATGTTGTTGATATCGT
AGAAATCATGTCattgttaaaaaaagtttattcaaaAGTATAAAGGAGGC
ACTTTCTTGAATTCTCCATTCGACAACTATTTTAACTCTAAATATGTTTA
AAAGAGCCTAATATTAACATAAAAGTTGACCCACTTTGAGGTGTTGTGAT
TTATAACCAAAGGAGAAGATTTATAGCGCATGGCACATGTGATGTGGCTC
TTCCAatacattttctatttttgttgtCAGAATATCAAAAGAAGTTGGAG
TCGGCAAAGAAGTGGAAAGAGATGCCAGTGTACGAAAAGTTTTATACATT
TATGAAGAAGAAAGTTATGAACATGAAATATGGGCTGCAACAAATTCACA
TGGCCATGAATATTATCATTGAAGATTTGACTGAGCTTGAAATGTATCCG
CGTGAAGACGCGCATGAGGGGGACTGGGAAGGAGAGGGCCGTGGAAAAGG
GAAACATGATGATGAGTTATGA Coding sequence (CDS) from alignment at sc0000277_pilon:96603..104224+ >XLOC_037999 ID=XLOC_037999|Name=XLOC_037999|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4026bp|location=Sequence derived from alignment at sc0000277_pilon:96603..104224+ (Clytia hemisphaerica_ch_hm2_pilon) atgagaaattacATAGACAGAATTTTACTGAAAATCAACGAAGGGCGTGA CCCTGCTGCATTGGGTGTTCTTCGATTTTGCTATGatgagaaattacATA GACAGAATTTTACTGAAAATCAACGAAGGGCGTGACCCTGCTGCATTGGG TGTTCTTCGATTTTGCTATGGACTTTTAATGATTATCGACATTTTTGACG AACGTGGTTTGTCTCGATTACCCATCAAGCATGGCGACCCTTCATCCTGC TACTTCCCGCTATTCGATAATATGCCTCGATTATCAATCGAATATTTATA CTTAGTATATCTggttttgctgatgtcagcatttggGATAATGATTGGGA TGTTCTTCAAGTTgtcttgtttttgtttcatgTCTTGTTATTGGTACATC TTTTTCCTGGATAAAACTGTTTGGAATAATCATTCATATTTGTATGGATT GATATCCATCATTTTGTTGCTAAGCAACGCTAATTATTATTGGACTTTTA ATGATTATCGACATTTTTGACGAACGTGGTTTGTCTCGATTACCCATCAA GCATGGCGACCCTTCATCCTGCTACTTCCCGCTATTCGATAATATGCCTC GATTATCAATCGAATATTTATACTTAGTATATCTggttttgctgatgtca gcatttggGATAATGATTGGGATGTTCTTCAAGTTgtcttgtttttgttt catgTCTTGTTATTGGTACATCTTTTTCCTGGATAAAACTGTTTGGAATA ATCATTCATATTTGTATGGATTGATATCCATCATTTTGTTGCTAAGCAAC GCTAATTATTATTGGTCAATAGATGGTTTGATTTGGCCATCGATAAGAAA TAAACAGATTCCCCTCTGGCAATATGGGGTTGTCAGATTTCAAGTCAATA GATGGTTTGATTTGGCCATCGATAAGAAATAAACAGATTCCCCTCTGGCA ATATGGGGTTGTCAGATTTCAAGTTTTCCTGTTATACTTTTACGCCGGTC TGAAGAAGCTGGATCGTGATTGGATGACAGGCTATTCCATGGTTGGCTTA TCGAGGGAATTCGTCTTCGATCCTTTCCGATCGTTTTTGACGAATGAGCA GATTGATTTTTATATGGTTCATTGTTGTGGCTTGATGTTCGACCTGGTCC AAGGctttatgttgttttttgataCCACTCGACCAATTGGTTTTCCTGTT ATACTTTTACGCCGGTCTGAAGAAGCTGGATCGTGATTGGATGACAGGCT ATTCCATGGTTGGCTTATCGAGGGAATTCGTCTTCGATCCTTTCCGATCG TTTTTGACGAATGAGCAGATTGATTTTTATATGGTTCATTGTTGTGGCTT GATGTTCGACCTGGTCCAAGGctttatgttgttttttgataCCACTCGAC CAATTGGTTTCTTTTTCGGTTACAATTTTCATATCATGAATGCAGTGATG TTCAACATTGGTATGTTCTCTTACATGTGTATGGCTGTCATACCGATATT CTGCAGACCGGAATGGCCaaagaaaatcatcaaaatgttACCGTCGTTCT TACAGAAAGTCTTACCTATGACTGAAGATTCGGTGGACAATAAATCATGC ACATTGATTGAACAACCTCCATCCAAGAAGAAGAAACTGAAACCAAGAAG TTGGACTTGGAACAATCTGTTCATGAATTTACTATGTTTACATTATGTTG CAGCACAGTTATTCTTACCttattctcatttcttgacaaaGGTTTCTTTT TCGGTTACAATTTTCATATCATGAATGCAGTGATGTTCAACATTGGTATG TTCTCTTACATGTGTATGGCTGTCATACCGATATTCTGCAGACCGGAATG GCCaaagaaaatcatcaaaatgttACCGTCGTTCTTACAGAAAGTCTTAC CTATGACTGAAGATTCGGTGGACAATAAATCATGCACATTGATTGAACAA CCTCCATCCAAGAAGAAGAAACTGAAACCAAGAAGTTGGACTTGGAACAA TCTGTTCATGAATTTACTATGTTTACATTATGTTGCAGCACAGTTATTCT TACCttattctcatttcttgacaaaGGGCTACAATTCATGGACACAAGGT TTATACGGTTACTCATGGGATATGATGATCCATTCGTGGAGTACACAACA CGTGGTCGTCAAGGTTACCGATCAAATAACAAACAAAGAACAATATCTCA GACCTGGTGGCTACAATTCATGGACACAAGGTTTATACGGTTACTCATGG GATATGATGATCCATTCGTGGAGTACACAACACGTGGTCGTCAAGGTTAC CGATCAAATAACAAACAAAGAACAATATCTCAGACCTGGTgcatttttcC CATACGGAGATTCAAAGAATCGTATCTTCTCACATCCAGACATGTTGAAA CAATACGCAACTTGTTTGGCTGATCGAGTCAAAGGAATGGATGAACTGGG TATTCAACATCCACAAATTACCGTGGATGTGTGGAAATCCATGAATGGTC GATACCAACAACGCATGgcatttttcCCATACGGAGATTCAAAGAATCGT ATCTTCTCACATCCAGACATGTTGAAACAATACGCAACTTGTTTGGCTGA TCGAGTCAAAGGAATGGATGAACTGGGTATTCAACATCCACAAATTACCG TGGATGTGTGGAAATCCATGAATGGTCGATACCAACAACGCATGCTTGAT CCAACGGTGGACCTTGTGACTGCAGAATGGGACCCTTTCACACACACCAA ATGGATGCAACCTCTTCTTGTTGAGCTTTCCTCATGGAGAAGCACACTTA AACAAATCCGTAATGCGAACTTCGAAGTGAATAATGCAACAGAGATTGTG TTCGTAGCAGATTTCCCTGGTTTGTCACTTGAGAATTACATAGCACCTGA GATCAAAGCTAATGTGACTGTTCTCAAAGCTTGATCCAACGGTGGACCTT GTGACTGCAGAATGGGACCCTTTCACACACACCAAATGGATGCAACCTCT TCTTGTTGAGCTTTCCTCATGGAGAAGCACACTTAAACAAATCCGTAATG CGAACTTCGAAGTGAATAATGCAACAGAGATTGTGTTCGTAGCAGATTTC CCTGGTTTGTCACTTGAGAATTACATAGCACCTGAGATCAAAGCTAATGT GACTGTTCTCAAAGGTGAAGTGATTGTCCAATCAGAACATGACCACAACA CGACTGTCAAAGTGAACGAAACGTTGAATTTGGCGAGCGATGAAACCCAC GTGATTCACACAGTAACCAATGATCCTTCGTGTTATATGTATGTTTACTA CAATGAAAGTTGGGTTGATAAAACTGATGAAGAACTATTGGCGTCTGATA CAGGTGAAGTGATTGTCCAATCAGAACATGACCACAACACGACTGTCAAA GTGAACGAAACGTTGAATTTGGCGAGCGATGAAACCCACGTGATTCACAC AGTAACCAATGATCCTTCGTGTTATATGTATGTTTACTACAATGAAAGTT GGGTTGATAAAACTGATGAAGAACTATTGGCGTCTGATACAGAATATCAA AAGAAGTTGGAGTCGGCAAAGAAGTGGAAAGAGATGCCAGTGTACGAAAA GTTTTATACATTTATGAAGAAGAAAGTTATGAACATGAAATATGGGCTGC AACAAATTCACATGGCCATGAATATTATCATTGAAGATTTGACTGAGCTT GAAATGTATCCGCGTGAAGACGCGCATGAGGGGGACTGGGAAGGAGAGGG CCGTGGAAAAGGGAAACATGATGATGAGTTATGAAATATCAAAAGAAGTT GGAGTCGGCAAAGAAGTGGAAAGAGATGCCAGTGTACGAAAAGTTTTATA CATTTATGAAGAAGAAAGTTATGAACATGAAATATGGGCTGCAACAAATT CACATGGCCATGAATATTATCATTGAAGATTTGACTGAGCTTGAAATGTA TCCGCGTGAAGACGCGCATGAGGGGGACTGGGAAGGAGAGGGCCGTGGAA AAGGGAAACATGATGATGAGTTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000277_pilon | genome | sc0000277_pilon:96603..104224 + |
Properties
| Property Name | Value |
| Aaloc | 1774-2013:7383 |
| Aaloc | 1585-1770:6701 |
| Aaloc | 1348-1581:6215 |
| Aaloc | 1171-1347:5639 |
| Aaloc | 1039-1170:5263 |
| Aaloc | 706-1038:4204 |
| Aaloc | 487-702:3253 |
| Aaloc | 409-486:2646 |
| Aaloc | 88-405:371 |
| Aaloc | 1-84:1 |
|