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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000330_pilon:89509..95498- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037945 ID=XLOC_037945|Name=XLOC_037945|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5990bp|location=Sequence derived from alignment at sc0000330_pilon:89509..95498- (Clytia hemisphaerica_ch_hm2_pilon) ATGTGCTCAATCGTACCACAGCCCATAACGTTTGCAACAGATGGTGTTTT
AGAACGTCCTCCACTACCAGGCCTTTATATCAAAGATGTTGGTGATATTT
CGTTACCATTATGTGAATCACAAGCCAAAGAAATTATTGAAATGGTTAAG
GATAATTCTGACGATCCTTCTGTTGAAGAAAGGTATGATATTTTTAATGA
AATAAAGAAAAAGTTTTTGCTAGCTCTGCGTTTGAGCTGGTCTGAGCTGA
ATTTGAAAATGCAATGGCAGGTTTCAGTTTACTAGACAAGCAACCTGCAC
TCTTGTTTTGTTAATACTGACGTCAGCTTGTAATGTACTGATGTCAGAAT
ATTATTGGATCAGATGTGTATTGCAGCGTGACATTGAGTTTAACATCCAA
ACAGGAATGACCATTGGGGTGCAAGCTGACTTCTTTAATATTCAATGAAG
ACGATGGTTGAAAGATAAGACACCCAAACTTTGAAGAGATTTCCTTTTTT
ATTTGATCGTGCTTTTAAGCCAGCTTCAACATAAAAAGGACTTTTAGTGC
GTTCAGCTACAGCTTAACCGGCTTGCGACGCCGGGTACCGGCTAGTAGCT
TTATAATGCTTTAAGGACATGAAATCATACAAAAGATGATTACTAGAACA
ATTAAGTATATGGTACAAACACAGGAGGAGAGCAACATACAAAGGGATAC
TAAAGCATAGGAGAAATAGGAGAAGACAAATTTGATATTGACCTAATTTA
CAAATTCATTAAACATTAGTAAATATAACAAAATAAACTGCTTTATAAAG
CATTCACATTGAATGACCAGCCCAGCCAACCATTCACCTCACCCACAAGA
TTTTTGGAGATTATCCTGGATAGCCCACCAATAAACTCTTTTGTTCATCT
TTCTTAATTTATTTTTGTTGCTTGGGTTGGCCAAGGCAGATGATTAATTT
TACGTACGCTGGTAAGGAATATTCAAGGTGATGGCATCTGAATGAAAAGA
CATTAATTAGGTTCTTAACAAGTATATTTAAATATGTTAGAAAAGCTGGC
TATAATAAGCATAATACCCCAGAACTCTAGGGGTCTACTATCTGAATATG
ATCAATAGATTTCAGAAATTGATTAGGTAACTTTGTATCATTTTGATAAA
AAAAAACTTGTGAAAATAAGAAAATGTGACAAAACTCAAAATTCACAAAA
TGTTAGCTCAAAAATGCATCCTTGTGAAACTACTTTGTTATTTTAGCCTT
AAATCAGTTGAAACAATTTCTAATCACATTTTCAAAATCAATGGTACATC
CTCTTTCTGTTCTTTTAAAATTATACCTATGAATTTCTTTGTTTCCATGG
CCGGTAAATCAAAGGAAAGCTGCTTTTTATGGATTTATAAAAGATTTGAA
GGTCCATTTAGGTCATACCTGTGATGTTTTCTCTCACTCCATCTATCTTA
TTACCTTCATGCTCAGACATATCTCCAAATGATGTTGAACCATGGACGTT
GATTCCACATTTGGGCTTGAAAACCACAATCTTGCATGTTTAGAATTCTT
GATGTTTTAACCACTCAGCCGGACTTTCTCCTGTACTCTCGAAGATCTTT
AGTCAAAGGTTACTGAATTTGTTTCTTTCTTTAGGAATTCCTGGGAGATC
AAATCAAATCAGCTGGCTTTGGAAAGTGAAAAGTTCGAAATGACCTGGAA
GAAAAAGATTATTCAAAAAGTCATTGCCGAATTAGGCTGTAAAGCTTCAG
AGGAAGTCACTGTGAGCACTCCAAGAGCTGTTTTGTATGGGAAAGGTGCT
TCGATTGACTTGACAAGCGATGATGAGGACAAAGAATCAGTGACACTAAT
TGTTCAACTACCATCAGTATTCACTGGAAATAACCTCACTATCCACCACG
ATGAGGATTCAAAAATAATAAAATTTGATGAAAAATACTCAAAATTCGAA
ATCATATATGGAGCATTTTATTCAAACTGTGAATATGAGCTCTCTACTTT
GAAATCTGGCTATCGATTGGTTCTTGTCTACAAGCTTACTTGGAATGATT
GTAAAATTCCTCAAAGTCGTATTGATGAAAGCAAAGAGGCTACACAAAAA
GTGAAATCTGCATTGTCTCAGGTATCTTTTAATAGTGATATCGATTCTAC
AAATCTATTCCACTTGTTCACTTTCATTATATAAAGTTAAACATTTCTCT
TCATTGGTTCTTAGAAAAACAGCCTTTTTTGACTAACTATTTTTTGATTT
GTTTTTAAATAAAATAACTTTTCTATACTTTTTGGACCTACCTGGAGGTC
CTATAAATTAACCTCTGTCCGTTCGTCCGTCCGTCCGTTCGTCCGTCCGT
CTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTG
GCACAATGATGCAAAATGGCAATGCCCAAAATGTGACGGAGCCCGATTTT
CGAAAAAAAATCATTTCCGGCCAAAAATGCCGGAAATATGCCGGAAAAAC
CGGTTTTTTGGCATTTTCTCAAGATTTCATCATTAGTTTTTTCTGATTTT
TTGCACAAAGATGCGTATTAGCAATGCCCAAAACTTGGCCGAGTCCAATT
TTTGAGAAAAAATCTTTTCCGGTCGAAAATGCCGGAAATATGCCGGAAAT
CGCCGTTTTTGCAGATTTTCATTGGACTTTTTCCTTATATTTCGTTGTTT
TTTCATACAAAAACATTTTTAATAGCAATGCCCACTATCAAGCATGTTTC
AATTTTCAATAAAATTGATTTTTGAAGCCGGAACTTTTTTAAAAGTCGCC
GGAACAACCTATTTTCGCCGGAAAGACAGTATTTCTTAAATTTCTCGAGC
TGTCCTTTATATTTTTTTATGAAATTTTGCACACTGACGCAATATGACAA
TATCTAAAATGTGACGGAGCCCGATTTTCGAAAAACATTTTTTTCCGGCC
TAAAATGCCGGAAATATGCCGGACAAACCGGTTTTTTGACATTTCCTCGA
ATTTTTATTTTTATTTTTTTCTTATTTTTTGCAGAAAGATGCGTATTCGC
AATGCTCAAAACATGGCCGTGTTCGATTTTTGAGAAAAAATTTTTTCCGG
TTGAAAATTCCAGAAATCGCCGTTTTTGCAGATTTTCATTGGGTTTTTTC
CTCATATTTCTATGTTTTTCACACAAAAACATTATCGATAACAATGCTCA
CCATCAAGCATGATTCAATTGTCAATAAAACTGATTTCGACCAGAACTTT
CTATTTATTTTTTCCCTACAACCCTTCCCTCTCCCCCCACCATCAATCAA
TGATGAATTTCTTGCGTTATGCATTTTCGCTAAACGCTATGTTTTCTGAC
TGATTTTTTTCATTTTTCTCCTTGCATTGCTATCTAACTTTCATCATCAG
GTAGGTTCATTCAGCATCTAGCTTGTTCTTTTTAAAGCTTTACCAGAATC
GAGAGAAGTATTTTGGATGGATGTTTGAAGAAAAGTGGGATCCAGATACC
ATTGAAAGTGGTAGCAAATCGTTGAAAGGAATTGATTGTGCTACTGCTAC
ATATCTAGAGTGGGCAAATAAAGAATTGCCAGAGGATGAACAATTCTCAT
TTTATTTGGTCACTTATGAAAAACGTGTCACAAAGAAAGGATACAACAAA
TTTGGCCATTACAGCCTTGGTAAGTAATATATGTGGAGTATTCCTATTTT
GAAATAATTCTCCCCCATATTTTGAAAGTCCAAAAGATCTTATCCCAGTC
TAAAACAGAAAACGTAAAATGTAAAAGCAGGAAATTTTTAAAACAAAAAA
ATGAAGGAACTGCTTCGTAATTTTTGTCATTTTTTGTGACTTCATCAGCT
TGCTAGTCTAAAACAGATAACAAAGCTATTGAAATATTTTATTTGGGAGT
ACAGGGATTTTTCTAAGTACTTTGAACTGGGACCGTTTTTGTAAACTTAG
ATTGAGTTTCTAGTATGCCTGAAAGGGAATTTTTATCAGCAAATGTATAT
TGATAAAGCTGGGGGTTTGGTTGGTTGGTGTTCAGAGGGCGAAGCCCCCA
AAAATATTTTGAATATGTAGATAATATTAGAGATTTTTGTTTGTAAACAA
CAAACAAGTTTCATTTTGCTAGAAAATGTCTTTTATATTTCGGATTGAGT
TTCAAAAACTCAATCTTAGATTGAGTATTTGGCAGGTATACGGACATAAA
AAAATGCTTAGAAAAATTCCTGGGAGTAAAACCATAATTTTTGCTTTGAT
CATTACTACTACTTTATGCGACAATCCATACATTTCCATTGTTCATGAAA
TTCATCATTCATTATCTGAATTTATTTCTTAAGACATGCACTATTGAATA
AATCATAATTGTTTTTAATTTTAGAACACCACCGCGAAGTGTGCGAAGAA
ATTGATCTTAAAGAAGGAGTTGACATGCAAACAATGATTAAATATCTTGA
CTTTAGTGGTTTACCAATTGATATAAAAAATGATTTACTCCAATGGCAAA
AAGGAAAGGGTTGGTCCGGAGTATGGACCAAACCTCGTCGAAAGACAACA
ATAGATTGGGGGCAAGCTGTAAGCAAAAGGATTGAAGACCATTGGACTTG
TTACACTAGAACTGTTCTTTTAGCTGTCCCAACAAATCGTCGTTTCGAAT
ATTTCTGTTTGTCTAAAAACCCAACGCAATGTGTCCAATTTCTGAAGTAC
AATGTAGATTCGCAGTCTGAAAATTACAAAAAACTGTTGAAGGAATTACT
GGAAAAATTTACAGCTGATGATTTTAACTGTGGTAAGAATACACATTACG
AGTTGGCTTATTTGTTTGTCAATACTTGGGATCCAGAAATGTCATTTATC
TATATTGACAAAATTATGGCTGGGACAATGAAGCGCTTTAAAACGCTCGT
GTACGGTGTTCCTCCCGGATGCGAAGAACCAGTTGCCAAAATTATTCAAT
CAGTACCCTGGGAAAAGTTCAAAGAGACTTATAAACACATTCTTGAGAAT
ATAGTAGTTAAATGGTATCCAAATGTGATGAAAATTTATGAGCTAACAGG
AATTGTTGGGATCATGGACATGCTCATTGAGCAGAGTTTAAAAATGTTCT
CAAAAGATCGGTATGCAATTCAACTCATCAGTGGTTCAGATCCAGCAAAT
CCATATTTCTGGGAAGAAGTCTTTGAGTTTGTTTGCAACAATGATGAGCT
TTATGAGACGTGGTTTGAAAAGTTTGCTAACCATAAAGATATCACTTCCA
GCCTTTCTTTGATGTCACGGTTCTTCAATGAAATGCATCACAGTGATCGC
CCACAATCATCCAAGTCTCGTATTCTGAATCTTTTCATCGATTGCATCAA
ACAAAGTGACGATTTGGTGACAAGGGATGATCATACACCGCAACATTTTG
AGTACGACGAAGATGATGACAAAGCCAGTGTTGGTAAACCTAGACATGGT
ATATCATTGTTGATTGCTTCTACCATTTATCCTTTGCTTGAGAAATCTGA
TCCTTACAAAGAAGAGCTAACTTACCTGTGCGACTATCTCATTTCAAGCA
ACTATTCTGTTATCATCAGCAGAATTTTGATTGGCTTAATTGAAGAAGGT
CAACCAGCAAGCCAAACTGGAGGCTTCAAAATGATTTATGGCATGTACAT
GAGTAGACTAATTGAGACAAATTTGAAAGCTTCACAGATTGAGGAAATAG
TCAATATCGCTGAAATTCTGTTGCGTAGTGCAGAATACAATGGGACAAAC
AAATCTAATTATGAGGCGATATGTAAATCCTTCAAAGAGCCTCATTTACT
GTACAAGTTAGCTGTAAATCTTTTTCAATGTTCTCGTGTTCTCGCCGACA
AAAAGTCAGATTTTAATGATGTGATCAATTATGCTCTCAAGCTGTTCCTG
GAATCTTTGGAAACCAAATCTATGAGCTGTATACACCCACTTTCCGAATT
TTTGGTTTTCTTGGTTGAGAATGTGACAGAATTTGAAAAT Coding sequence (CDS) from alignment at sc0000330_pilon:89509..95498- >XLOC_037945 ID=XLOC_037945|Name=XLOC_037945|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5034bp|location=Sequence derived from alignment at sc0000330_pilon:89509..95498- (Clytia hemisphaerica_ch_hm2_pilon) ATGTGCTCAATCGTACCACAGCCCATAACGTTTGCAACAGATGGTGTTTT AGAACGTCCTCCACTACCAGGCCTTTATATCAAAGATGTTGGTGATATTT CGTTACCATTATGTGAATCACAAGCCAAAGAAATTATTGAAATGGTTAAG GATAATTCTGACGATCCTTCTGTTGAAGAAAGATGTGCTCAATCGTACCA CAGCCCATAACGTTTGCAACAGATGGTGTTTTAGAACGTCCTCCACTACC AGGCCTTTATATCAAAGATGTTGGTGATATTTCGTTACCATTATGTGAAT CACAAGCCAAAGAAATTATTGAAATGGTTAAGGATAATTCTGACGATCCT TCTGTTGAAGAAAGGAATTCCTGGGAGATCAAATCAAATCAGCTGGCTTT GGAAAGTGAAAAGTTCGAAATGACCTGGAAGAAAAAGATTATTCAAAAAG TCATTGCCGAATTAGGCTGTAAAGCTTCAGAGGAAGTCACTGTGAGCACT CCAAGAGCTGTTTTGTATGGGAAAGGTGCTTCGATTGACTTGACAAGCGA TGATGAGGACAAAGAATCAGTGACACTAATTGTTCAACTACCATCAGTAT TCACTGGAAATAACCTCACTATCCACCACGATGAGGATTCAAAAATAATA AAATTTGATGAAAAATACTCAAAATTCGAAATCATATATGGAGCATTTTA TTCAAACTGTGAATATGAGCTCTCTACTTTGAAATCTGGCTATCGATTGG TTCTTGTCTACAAGCTTACTTGGAATGATTGTAAAATTCCTCAAAGTCGT ATTGATGAAAGCAAAGAGGCTACACAAAAAGTGAAATCTGCATTGTCTCA GGAATTCCTGGGAGATCAAATCAAATCAGCTGGCTTTGGAAAGTGAAAAG TTCGAAATGACCTGGAAGAAAAAGATTATTCAAAAAGTCATTGCCGAATT AGGCTGTAAAGCTTCAGAGGAAGTCACTGTGAGCACTCCAAGAGCTGTTT TGTATGGGAAAGGTGCTTCGATTGACTTGACAAGCGATGATGAGGACAAA GAATCAGTGACACTAATTGTTCAACTACCATCAGTATTCACTGGAAATAA CCTCACTATCCACCACGATGAGGATTCAAAAATAATAAAATTTGATGAAA AATACTCAAAATTCGAAATCATATATGGAGCATTTTATTCAAACTGTGAA TATGAGCTCTCTACTTTGAAATCTGGCTATCGATTGGTTCTTGTCTACAA GCTTACTTGGAATGATTGTAAAATTCCTCAAAGTCGTATTGATGAAAGCA AAGAGGCTACACAAAAAGTGAAATCTGCATTGTCTCAGCTTTACCAGAAT CGAGAGAAGTATTTTGGATGGATGTTTGAAGAAAAGTGGGATCCAGATAC CATTGAAAGTGGTAGCAAATCGTTGAAAGGAATTGATTGTGCTACTGCTA CATATCTAGAGTGGGCAAATAAAGAATTGCCAGAGGATGAACAATTCTCA TTTTATTTGGTCACTTATGAAAAACGTGTCACAAAGAAAGGATACAACAA ATTTGGCCATTACAGCCTTGCTTTACCAGAATCGAGAGAAGTATTTTGGA TGGATGTTTGAAGAAAAGTGGGATCCAGATACCATTGAAAGTGGTAGCAA ATCGTTGAAAGGAATTGATTGTGCTACTGCTACATATCTAGAGTGGGCAA ATAAAGAATTGCCAGAGGATGAACAATTCTCATTTTATTTGGTCACTTAT GAAAAACGTGTCACAAAGAAAGGATACAACAAATTTGGCCATTACAGCCT TGAACACCACCGCGAAGTGTGCGAAGAAATTGATCTTAAAGAAGGAGTTG ACATGCAAACAATGATTAAATATCTTGACTTTAGTGGTTTACCAATTGAT ATAAAAAATGATTTACTCCAATGGCAAAAAGGAAAGGGTTGGTCCGGAGT ATGGACCAAACCTCGTCGAAAGACAACAATAGATTGGGGGCAAGCTGTAA GCAAAAGGATTGAAGACCATTGGACTTGTTACACTAGAACTGTTCTTTTA GCTGTCCCAACAAATCGTCGTTTCGAATATTTCTGTTTGTCTAAAAACCC AACGCAATGTGTCCAATTTCTGAAGTACAATGTAGATTCGCAGTCTGAAA ATTACAAAAAACTGTTGAAGGAATTACTGGAAAAATTTACAGCTGATGAT TTTAACTGTGGTAAGAATACACATTACGAGTTGGCTTATTTGTTTGTCAA TACTTGGGATCCAGAAATGTCATTTATCTATATTGACAAAATTATGGCTG GGACAATGAAGCGCTTTAAAACGCTCGTGTACGGTGTTCCTCCCGGATGC GAAGAACCAGTTGCCAAAATTATTCAATCAGTACCCTGGGAAAAGTTCAA AGAGACTTATAAACACATTCTTGAGAATATAGTAGTTAAATGGTATCCAA ATGTGATGAAAATTTATGAGCTAACAGGAATTGTTGGGATCATGGACATG CTCATTGAGCAGAGTTTAAAAATGTTCTCAAAAGATCGGTATGCAATTCA ACTCATCAGTGGTTCAGATCCAGCAAATCCATATTTCTGGGAAGAAGTCT TTGAGTTTGTTTGCAACAATGATGAGCTTTATGAGACGTGGTTTGAAAAG TTTGCTAACCATAAAGATATCACTTCCAGCCTTTCTTTGATGTCACGGTT CTTCAATGAAATGCATCACAGTGATCGCCCACAATCATCCAAGTCTCGTA TTCTGAATCTTTTCATCGATTGCATCAAACAAAGTGACGATTTGGTGACA AGGGATGATCATACACCGCAACATTTTGAGTACGACGAAGATGATGACAA AGCCAGTGTTGGTAAACCTAGACATGGTATATCATTGTTGATTGCTTCTA CCATTTATCCTTTGCTTGAGAAATCTGATCCTTACAAAGAAGAGCTAACT TACCTGTGCGACTATCTCATTTCAAGCAACTATTCTGTTATCATCAGCAG AATTTTGATTGGCTTAATTGAAGAAGGTCAACCAGCAAGCCAAACTGGAG GCTTCAAAATGATTTATGGCATGTACATGAGTAGACTAATTGAGACAAAT TTGAAAGCTTCACAGATTGAGGAAATAGTCAATATCGCTGAAATTCTGTT GCGTAGTGCAGAATACAATGGGACAAACAAATCTAATTATGAGGCGATAT GTAAATCCTTCAAAGAGCCTCATTTACTGTACAAGTTAGCTGTAAATCTT TTTCAATGTTCTCGTGTTCTCGCCGACAAAAAGTCAGATTTTAATGATGT GATCAATTATGCTCTCAAGCTGTTCCTGGAATCTTTGGAAACCAAATCTA TGAGCTGTATACACCCACTTTCCGAATTTTTGGTTTTCTTGGTTGAGAAT GTGACAGAATTTGAAAATAACACCACCGCGAAGTGTGCGAAGAAATTGAT CTTAAAGAAGGAGTTGACATGCAAACAATGATTAAATATCTTGACTTTAG TGGTTTACCAATTGATATAAAAAATGATTTACTCCAATGGCAAAAAGGAA AGGGTTGGTCCGGAGTATGGACCAAACCTCGTCGAAAGACAACAATAGAT TGGGGGCAAGCTGTAAGCAAAAGGATTGAAGACCATTGGACTTGTTACAC TAGAACTGTTCTTTTAGCTGTCCCAACAAATCGTCGTTTCGAATATTTCT GTTTGTCTAAAAACCCAACGCAATGTGTCCAATTTCTGAAGTACAATGTA GATTCGCAGTCTGAAAATTACAAAAAACTGTTGAAGGAATTACTGGAAAA ATTTACAGCTGATGATTTTAACTGTGGTAAGAATACACATTACGAGTTGG CTTATTTGTTTGTCAATACTTGGGATCCAGAAATGTCATTTATCTATATT GACAAAATTATGGCTGGGACAATGAAGCGCTTTAAAACGCTCGTGTACGG TGTTCCTCCCGGATGCGAAGAACCAGTTGCCAAAATTATTCAATCAGTAC CCTGGGAAAAGTTCAAAGAGACTTATAAACACATTCTTGAGAATATAGTA GTTAAATGGTATCCAAATGTGATGAAAATTTATGAGCTAACAGGAATTGT TGGGATCATGGACATGCTCATTGAGCAGAGTTTAAAAATGTTCTCAAAAG ATCGGTATGCAATTCAACTCATCAGTGGTTCAGATCCAGCAAATCCATAT TTCTGGGAAGAAGTCTTTGAGTTTGTTTGCAACAATGATGAGCTTTATGA GACGTGGTTTGAAAAGTTTGCTAACCATAAAGATATCACTTCCAGCCTTT CTTTGATGTCACGGTTCTTCAATGAAATGCATCACAGTGATCGCCCACAA TCATCCAAGTCTCGTATTCTGAATCTTTTCATCGATTGCATCAAACAAAG TGACGATTTGGTGACAAGGGATGATCATACACCGCAACATTTTGAGTACG ACGAAGATGATGACAAAGCCAGTGTTGGTAAACCTAGACATGGTATATCA TTGTTGATTGCTTCTACCATTTATCCTTTGCTTGAGAAATCTGATCCTTA CAAAGAAGAGCTAACTTACCTGTGCGACTATCTCATTTCAAGCAACTATT CTGTTATCATCAGCAGAATTTTGATTGGCTTAATTGAAGAAGGTCAACCA GCAAGCCAAACTGGAGGCTTCAAAATGATTTATGGCATGTACATGAGTAG ACTAATTGAGACAAATTTGAAAGCTTCACAGATTGAGGAAATAGTCAATA TCGCTGAAATTCTGTTGCGTAGTGCAGAATACAATGGGACAAACAAATCT AATTATGAGGCGATATGTAAATCCTTCAAAGAGCCTCATTTACTGTACAA GTTAGCTGTAAATCTTTTTCAATGTTCTCGTGTTCTCGCCGACAAAAAGT CAGATTTTAATGATGTGATCAATTATGCTCTCAAGCTGTTCCTGGAATCT TTGGAAACCAAATCTATGAGCTGTATACACCCACTTTCCGAATTTTTGGT TTTCTTGGTTGAGAATGTGACAGAATTTGAAAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000330_pilon | genome | sc0000330_pilon:89509..95498 - |
Properties
| Property Name | Value |
| Aaloc | 904-2517:1615 |
| Aaloc | 670-900:2554 |
| Aaloc | 184-669:4356 |
| Aaloc | 1-180:5991 |
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