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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000032_pilon:1739890..1744175+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037905 ID=XLOC_037905|Name=XLOC_037905|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4286bp|location=Sequence derived from alignment at sc0000032_pilon:1739890..1744175+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTTCATCAAGG
GGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTACAGTTGGGT
GAGTTAATTAAGTTACATTCTTGAGTTATAGTTTTTTAGTAGAAGTGTGG
AGTCTTTTCACCTTTTCACCACAAGATAATTTCTGACTTATACTTTTGTT
TTTACAAAAGTAAATATTCCACAGATTGAACTTTAACTTAAAACATATTT
TCTAGTTCTTGTAATCAATAATTTAGTTGAAATTGGCGTTGGAGTTGGTT
CTGGCGGAACCAGCACTTTAAAATAGCAATCAAATAAAGCTTCcatattt
tcggaaaaaagtagggggagggggtatttaATCgaatttgaaaatccaaa
atgcaTTTTGAGACTAAAACCCACATCAAAGAATGAAAGACTTGAGACCT
GAAACTTTCATTTCTAGATACGGCGATATATGTCCAAAGACGAAACCTGG
TCGTATATTCAGCATTGTATGGGTGATCACAGGAGTTGCAAGCTGTGCAT
TATTCACGTCCTACATGACGACGGTTTTGACGTCCATTTGTATGACGGAA
GACGTGTCTCTGACGGCAACCAAggtaaaaacaacaaataacACTCCATT
CACAcactaaaaatttgtttttattcgaaCTCTTGAGCATTAATTTCCTT
TGAGCTGTTTGGTCaacctttttgtaaaaaagtttctttataaTTGTTGA
ATGATGGCCGATTGGTTTGAAGTGCCGACTGTTCCTTTCAGTCTAAGGAA
AGCACAAAAGATTCACAAAGGATATTGGGAAAACAACCAAAAGTCGGCGA
GTCCAAGAATACTGCACTATTCACGGCAAAATATCGATTGCATCAGATAG
CTTTAGAGAGTAAATAGAAAAAAGTGGTTATATAAGGTTCAGAAAGAGGT
GTCTGTTATGAAGGAACGCCCTCTTTAAACCTTTTGAATCTCCTTTCCCA
ATTTCTTTTAGGTTGGCGTCCTAACTGAAAGCGAAGAACATCGGTTTGCC
ATGAAACGAAATTCAATGCCTCAAGGTAAATCCTTCCTTATTTCCTGAAA
GAGCCAAAGGCGTTCAAAAGAGTTCAATGATAGTAACAATATATAGgtca
tttaaagattttgagagTTTTAAAAGGATTTCTGAGTTTTCTAAACCAAG
CTACAATGGTGGAACAAAGGtttgtaaaacttttaaaaaaatcccTAAAA
GTGTCAATCTTTTTCACACTTGGGGAAATTCATTGGCAGAAAATATCAAT
ATGCTTGCCAGGAGTCCTTATGACTTCAGTCCGTATGATTTTTGGACTTC
CAAGACTTCCAAGGACTGAAAATGGGTGAACCTCGGCCACACAGATTGTA
GGTGCACCAGAGAGCTCTGAAAAGTTGTTTTTCATGAAGGAACCTCCTCA
AATATGGTCTAGTTAGTTGTTTTCTCGAAGGAGATGAAGAGGAAAACTCG
TCGAGTCTTCAATCTCAGACCAAAAAAGGCCTGAAGGTGACGACATTCAT
TTCCTTCAATATTGTGTGGATCaaaaaaaCATCATTGGCTTTATTTCatg
gatttttgaaaagtctacaatcTTTTGCCCATGGTTGTAGCTATGAAAGT
TGCACCGTCTTTTAACCTCTGTTGGGCAAATCAATATATTTGTAGCATTT
CCAACGATAAATGAAGTCATAGATGCTTTAAAACGCCGTGAAGTTCGTGG
TATCTTAATCGATAGTTACATAGCAGCCGAATATGAAGAACAACTGAAAT
CGTTCAAGAGACAAATGGTCATTGAATATATCACAAGTTATGGTGTGGTG
TTTTTAAACGAAGGTGTTCGCTTCTCAGATTGTGTGCGAGATTATGTGTT
TTCAAGACAGAATGAAATATCAGAGATTATACGACAGAACGTACAATTAT
TAGAGGTATGTAGGTTCTCTTCCTTCCATGGGTTATTGCGATAAAAGTAC
TAATCTTGCCACAGATACATGACTTGTGGCTCAACTTTCAGGAGGCAAAA
AGATTAGAACAGGGTCAGAGGCGTCTAATGTTCACAAAGTTCATAGTTAC
TGTgctggtataatatcagggttggtcaaagcaaaatttttagaaaatga
gctagaatgttAAGCAACCTCAGGTCTGACCCGAAAACTcttcgagcatc
ttcctattttttactagGGGAAGCATCTTGGGGGTCAAAGAATATGGCTT
AATTGTTTTATTCTTGGATAATGATAATGATTCATTGGGATCACGTCGAA
ATTTCACCGAAGAAAAATGTTGTGCTATAATTCTTTTATTAGGTTTCCAC
GACGAGTGCTGCAGCAGAGAAATCGAACAATTTGATTGATGTTAAGAGTC
CTTCATTTTTCTATATCGTAACTGGTGTGATTGGAATATTAGTGGTGGCA
GCTTTCTTTGGCACGATATGGGATATTAGAAAAAGACAAATGGAAAAACG
TGAGTATTGTACAAATGAAGTAAAAGCCCGAATGGTtagaagcgaatctt
taacctttcttagCCAAGCAAAAGCGAAGCCTTAGAAtatacgccgtatt
tttgactATGGATTAAATTtagcggtttctttgttttcgagtggtatatt
ttttgaaatctggcgaaaaagtttactttcaatctgaaATTTGTACAAAA
ACCACGCGGGCCGCTCAAGGATTTGGGGATTTagcggcttcaaatcctac
gTAGGAGGGATTTATGCAATGAATACAGATAAAAGTTATCAAAGagctaa
aaaaaaacatacgtCAAAGAACTTCGGGGTATAATTTTTTCTCTGTAACA
GTGCGATCAACGGAATCAATCCGGTACAGCTATTAGGGTGTTTGGAACTG
TTTTAAGATTAGTTGTTGCAAgtagaaatgaatgaaatgtAATTAAGAAG
AGAAAATTACATTAATTGGTTGTGGACAATTAACCAGTTAATATCTAAGA
ATATCTATGAAAATTATCCCATTCTCACATAACCTTCGATAGCTCAGTTG
GTAGAGCGGAGGACTGTAGATGTGAATGAGCAGATATCCTTAGGTCGCTG
GTTCAAATCCGGCTCGAAGGACTAATtttctatgatttttttttctaacg
AGATTTCTTTTTCACTTGGTGTATATCAGATTctttcatattggaagttt
atcgtggcttggatcacgagatttacgtttggctacgtttcgagagattc
ttctcccatcatcggatCCTTTCATCTTTTTAATAAAGAGTCAAATACAG
AATTTAAGAACCTTTTATGATGGTAATACAGCAGCAAATTTTCTTAAACC
TAActaaaaagaaatacaaaaaggCCACTCACAACATCTTTTGACTCTCC
GTTCGAATCTGGTGGTACGTTTTTAGATAGAAAGCATTGATATTTAACGT
GGAACAATGAGAACTGGTGACTGCTATTTTCAGCAATCTTTAGCTGTAGC
TATTTTTGATTTGTCAAAAACAGTTCCAATGACAACACGAGTGATCTATC
CCACTTTTCCGGCCTAACCAACCTGGTCGACTCTAAGTGACGACACCACA
TCGATTGCTTCAATTGATCTTTAAAGATGACATCGTGGAGATCGAATTAA
GCTTGACAAACAATTCAGATTACAGGAAGCTTGGCCGAGCAAATAGAAAT
ATTGATAACGGCTCTCGActtcgaaaatacaaaaaacaacagaaatttGA
ACACTGAGTTTCTGCTGGttttaatacacgttttttttataagaacaaac
tatataagaacataaggcttcgctggccaaaatgttaagaacaagttaag
aagatttaagactttgtggactgaaaaacaccctatttcttaggaaaatg
gtcaaaaatattcaaaaaaatggtcaaagtaagaacatgttaagaacatt
attaggcttaaaactcaaaaagttattgagaacatccaaaggcttcaaaa
attttggatgctcttataaaaaaatgtgtactggCTTTGATAATTGGTAT
TctcctttttttcattttcagtgaagAAGTACAACCCCCACGAAGATATT
TCTCTGTCCGAATGGCGTGCACGTTATAAATGTGACTTTCAACAGGTGTT
GGAAGACATGCAAGGGGAATGTACAAGCATAAGTGATAAATGTACTTCTA
TACTGAAACAACTTCAAAGTAGTAATGGGATTGTATGTTTACGGAAAAAA
CGTTCGGATGATATGAGGATTGAGTATGACTACTAG Coding sequence (CDS) from alignment at sc0000032_pilon:1739890..1744175+ >XLOC_037905 ID=XLOC_037905|Name=XLOC_037905|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1902bp|location=Sequence derived from alignment at sc0000032_pilon:1739890..1744175+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTTCATCAAGG
GGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTACAGTTGGAT
GATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTTCATCAAGGGG
TCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTACAGTTGGATAC
GGCGATATATGTCCAAAGACGAAACCTGGTCGTATATTCAGCATTGTATG
GGTGATCACAGGAGTTGCAAGCTGTGCATTATTCACGTCCTACATGACGA
CGGTTTTGACGTCCATTTGTATGACGGAAGACGTGTCTCTGACGGCAACC
AAgATACGGCGATATATGTCCAAAGACGAAACCTGGTCGTATATTCAGCA
TTGTATGGGTGATCACAGGAGTTGCAAGCTGTGCATTATTCACGTCCTAC
ATGACGACGGTTTTGACGTCCATTTGTATGACGGAAGACGTGTCTCTGAC
GGCAACCAAgGTTGGCGTCCTAACTGAAAGCGAAGAACATCGGTTTGCCA
TGAAACGAAATTCAATGCCTCAAGGTTGGCGTCCTAACTGAAAGCGAAGA
ACATCGGTTTGCCATGAAACGAAATTCAATGCCTCAAGCATTTCCAACGA
TAAATGAAGTCATAGATGCTTTAAAACGCCGTGAAGTTCGTGGTATCTTA
ATCGATAGTTACATAGCAGCCGAATATGAAGAACAACTGAAATCGTTCAA
GAGACAAATGGTCATTGAATATATCACAAGTTATGGTGTGGTGTTTTTAA
ACGAAGGTGTTCGCTTCTCAGATTGTGTGCGAGATTATGTGTTTTCAAGA
CAGAATGAAATATCAGAGATTATACGACAGAACGTACAATTATTAGAGCA
TTTCCAACGATAAATGAAGTCATAGATGCTTTAAAACGCCGTGAAGTTCG
TGGTATCTTAATCGATAGTTACATAGCAGCCGAATATGAAGAACAACTGA
AATCGTTCAAGAGACAAATGGTCATTGAATATATCACAAGTTATGGTGTG
GTGTTTTTAAACGAAGGTGTTCGCTTCTCAGATTGTGTGCGAGATTATGT
GTTTTCAAGACAGAATGAAATATCAGAGATTATACGACAGAACGTACAAT
TATTAGAGGTTTCCACGACGAGTGCTGCAGCAGAGAAATCGAACAATTTG
ATTGATGTTAAGAGTCCTTCATTTTTCTATATCGTAACTGGTGTGATTGG
AATATTAGTGGTGGCAGCTTTCTTTGGCACGATATGGGATATTAGAAAAA
GACAAATGGAAAAACGTTTCCACGACGAGTGCTGCAGCAGAGAAATCGAA
CAATTTGATTGATGTTAAGAGTCCTTCATTTTTCTATATCGTAACTGGTG
TGATTGGAATATTAGTGGTGGCAGCTTTCTTTGGCACGATATGGGATATT
AGAAAAAGACAAATGGAAAAACtgaagAAGTACAACCCCCACGAAGATAT
TTCTCTGTCCGAATGGCGTGCACGTTATAAATGTGACTTTCAACAGGTGT
TGGAAGACATGCAAGGGGAATGTACAAGCATAAGTGATAAATGTACTTCT
ATACTGAAACAACTTCAAAGTAGTAATGGGATTGTATGTTTACGGAAAAA
ACGTTCGGATGATATGAGGATTGAGTATGACTACTAGtgaagAAGTACAA
CCCCCACGAAGATATTTCTCTGTCCGAATGGCGTGCACGTTATAAATGTG
ACTTTCAACAGGTGTTGGAAGACATGCAAGGGGAATGTACAAGCATAAGT
GATAAATGTACTTCTATACTGAAACAACTTCAAAGTAGTAATGGGATTGT
ATGTTTACGGAAAAAACGTTCGGATGATATGAGGATTGAGTATGACTACT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000032_pilon | genome | sc0000032_pilon:1739890..1744175 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 739-951:4074 |
| Aaloc | 580-735:2343 |
| Aaloc | 322-579:1698 |
| Aaloc | 256-318:1012 |
| Aaloc | 100-255:469 |
| Aaloc | 1-96:1 |
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