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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000165_pilon:603023..606070- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037898 ID=XLOC_037898|Name=XLOC_037898|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3048bp|location=Sequence derived from alignment at sc0000165_pilon:603023..606070- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTACGATAATTCCTCTAACCTCACAGCTCTTTTTTAACTGGAAAAG
TATGAAGCTTCAAGCTTTATGTTGGTCATTCTTGTTGTCATGGTTGCAAT
TTGCAGTCGGTAAGTATAACGGTTATCTTTCTTCCCCTAAACATGAACCA
CAAAAAACGTACGTACAACTTTTCTGGTAAGTAGTCAATAATCAATGCAA
CAAAGAGTTACATAAGTTTTTCACCGGACTTTGAAATATCGTTATATCGT
TTTTGAAATTTCCAAAATATATCAATATCTAGGTAGTTCCACAGAATTAT
TATTCCTCAGTTCATGAAAACTTACTTCTTGCTTCTTAGGGTTGAAGATG
TCCAACACTCCAAGGGAAGAGAGCATTCATACTGAACTGTTCACAAACTA
CAATGCAAATGTGAAACCGGATGGTTTAATCAACAATACTGTTCAAGTAC
ATTTGGATGTCACCGTCCTCAAACTCTCCTTCTTGGTAAGTGATCTTATC
AACCCACTACTATGTTTGATGGTTATAAATATGGGTAGGTTGATAAGGAA
CACCGTCATGGTGTCGGAAGGAAAAGAGCCATGGCGACTGGAAACAAGTC
TTCCTTTCTAAATACAAGTTGAATACAAGTCCTGCATTGTCTGTATGTTC
ATCATATTATTTTGACACGATCCTGATTAAAGGAAATCTGTTAATGCTTA
TCACAAGTCGATTCTTTTCATTTTCAGGACATCAGATCGCAAGTTCTGTC
GATCCAAACCTTCACCACCCTGGTAAGAAATTGTGGTTTTTATTCAAAAA
TGAATTGAAGTCGTTTTTATATTCGTGGAAACGTTCTTTTTTCATAAAAT
TCCGTGATTCTGTAAACTGGTATTGATTTCTTATCCCAGAAAAATTTGGA
TCTTCCCATTTCAACCTTCTCGTCTTTTCTGACTGATAGAGATGGTTTGA
CAAACGTTTGATGTGGGATCCAAAGGCACACCATGACATAACACAAATAT
CTGTTCCCAATTCATTGCTCTGGACTCCTGATATCGTCTTGTATAATGAG
TAAGTAGTATAAAGCCCCTGTCGTTGTGGCTTTATGCGTTAACTTGGGGA
GTTACTGGAAAAATCGGCCAACATGTCATCTCTGGAGGGAGTGTATTCTG
ATGGTCGCTGTGAGAAAGCTACAAAAAAAAGCATTGTTTGTGACAGGGGT
GTATCTGTTAAATAGCTCCTTTCTCAAGAAGCGAATCGTGGTGCAGCGGT
AGAGCATCCGGCTACGGTTATATCAAAGAATCTCAAAATGGTACTTAATG
CATCTCTGCTTGATGCTCAACAATTAAGAGAAGGATCAAGGGTAAATGGA
GAAATCCAGGGAGAAAGAGTAGCGCTCTTCCCTACCTTCGGGTAAAGCTA
TCGAATGAGGAGCCTTCGGGTCGCCTCCTACTGTGGTTACAGACTTACTT
ACCTCTCAGGGGGTTACAGGGCATCCCCTTCGTCATTTCATCCCAAACAA
AGTAGCAGGTATTCATTTCATTTCATTTTCCATCAAAATAAGGCTACAAC
TTTCTTTTACAGTGCAGATAACGATTATACAACACATAATGAAATTTACC
GAACGAACGTTCAAATCCATCATAAAGGTATGTTGACATGGACCTCAAAT
ATCGAGTGGAAAGCCAATTGCGAAGTAGACATCACCTGGTTCCCGCTTGA
TAAACAGGTAAGAACACCCTTATCACTGCAATATAATGATGGTGTATTTT
TGATGACTCCATTGATTCTACTGGTTTTCTTGCAGAAGAATGTACTTATA
CTATGAATGTACAAAACAAATGAACAAAGATTTTGTTTATTTCCAGGTTT
GCAACTTGTTGTACGGTTCATTGTCATACACATCAGAGCAATTATCTCTG
GTACTTCGAGAGAAAGTCAGGAATATCGATGGTTTTGTGAAAAGAGGAGG
TTAGTGCAGATAATAATTTCCAACCAGCTTTTTAAAAAACACAGTCTATG
TTAAAGTGCTTTTTAGAATTTTAGAATGTCTTGCGTAATACTTTACAGTG
TAGTTTCAGTTTTGGATCTTACGTAATTCAATCTCTAATATCTTTTTGTT
GATTACATCAGGCAGAAATCTATATTTTATACATGGCAAATATAAAAAAA
TTCACTATGGTCAGAGCCCTTAACTTGAACCTCTATAACTCGAAAAAAGT
TTCATGGTCCCTTTGTTATGCCTTTTAAACTATGAACTATAATTCGAAAT
TATAATAACTCGAACAAATTTGTGTTCCCCCGTGCGTGTTCGAGTTATGG
AGACTTCACTGTATAACAAACCCTGATCTATCTTTCAGATCGAAACTTCG
TACAAAGTGGTGAATGGGACGTCAAAGACATCAACATCAAATCAGTGGAA
CAGAAATTCCCATGCTGTAGAGACAATTTCTCTGCTCTTTCGTATACCGT
AGCTTTGTCACGTTTCCCGCAATTCTATTTCTTGTATATGTTTTTCCCGA
TTTTCTCGCAATTCTTTTTGTTTTTGATGGTTTTTCACATTAGACCCGAA
TCAGGTGAACGACTGGGTTTCGGAATCACTATTCTGCTAAACATCACAAT
GTTTATGACATTCATATCGGAAAAGCTTCCCGAGAAATCGAACAACCGAC
CTCTTATTGGCCTGCTCTTCTCCGTTCTCTTTTTCATCTATTCACTCGGA
CTCGCTCTAGCCTCTATGACTACATTCTTCTCGTCCAGGCTAGGACCAGT
CCCTCACTGGTTACGCAAGTTTGCTGCTCCAGCTGCAACTGAAGAGGCTT
TTATTGTTGAAAACCAAACCTCAGAAAACATTGAAGATGAGGAGATTAAT
ACGACAAAAGATGGACCGAAAATCCAGACAATTAGTCGGGGATCCAATTC
AGAGGTCACGTGGGCGATGGTAATGAGATCATTGGACAAATATCTCTTTT
ACATTTTCTTGGTCATTTCTGTATTGTTACCGATTATTATCGGTCTCTCC
TTGGATCAGAACTTTTTTGCAGGATGGAAAAATATTTTTAATGTTTGA Coding sequence (CDS) from alignment at sc0000165_pilon:603023..606070- >XLOC_037898 ID=XLOC_037898|Name=XLOC_037898|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2736bp|location=Sequence derived from alignment at sc0000165_pilon:603023..606070- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTACGATAATTCCTCTAACCTCACAGCTCTTTTTTAACTGGAAAAG
TATGAAGCTTCAAGCTTTATGTTGGTCATTCTTGTTGTCATGGTTGCAAT
TTGCAGTCGATGTTTACGATAATTCCTCTAACCTCACAGCTCTTTTTTAA
CTGGAAAAGTATGAAGCTTCAAGCTTTATGTTGGTCATTCTTGTTGTCAT
GGTTGCAATTTGCAGTCGGGTTGAAGATGTCCAACACTCCAAGGGAAGAG
AGCATTCATACTGAACTGTTCACAAACTACAATGCAAATGTGAAACCGGA
TGGTTTAATCAACAATACTGTTCAAGTACATTTGGATGTCACCGTCCTCA
AACTCTCCTTCTTGGGTTGAAGATGTCCAACACTCCAAGGGAAGAGAGCA
TTCATACTGAACTGTTCACAAACTACAATGCAAATGTGAAACCGGATGGT
TTAATCAACAATACTGTTCAAGTACATTTGGATGTCACCGTCCTCAAACT
CTCCTTCTTGGACATCAGATCGCAAGTTCTGTCGATCCAAACCTTCACCA
CCCTGGACATCAGATCGCAAGTTCTGTCGATCCAAACCTTCACCACCCTG
AGATGGTTTGACAAACGTTTGATGTGGGATCCAAAGGCACACCATGACAT
AACACAAATATCTGTTCCCAATTCATTGCTCTGGACTCCTGATATCGTCT
TGTATAATGAAGATGGTTTGACAAACGTTTGATGTGGGATCCAAAGGCAC
ACCATGACATAACACAAATATCTGTTCCCAATTCATTGCTCTGGACTCCT
GATATCGTCTTGTATAATGATGCAGATAACGATTATACAACACATAATGA
AATTTACCGAACGAACGTTCAAATCCATCATAAAGGTATGTTGACATGGA
CCTCAAATATCGAGTGGAAAGCCAATTGCGAAGTAGACATCACCTGGTTC
CCGCTTGATAAACAGTGCAGATAACGATTATACAACACATAATGAAATTT
ACCGAACGAACGTTCAAATCCATCATAAAGGTATGTTGACATGGACCTCA
AATATCGAGTGGAAAGCCAATTGCGAAGTAGACATCACCTGGTTCCCGCT
TGATAAACAGGTTTGCAACTTGTTGTACGGTTCATTGTCATACACATCAG
AGCAATTATCTCTGGTACTTCGAGAGAAAGTCAGGAATATCGATGGTTTT
GTGAAAAGAGGAGGTTTGCAACTTGTTGTACGGTTCATTGTCATACACAT
CAGAGCAATTATCTCTGGTACTTCGAGAGAAAGTCAGGAATATCGATGGT
TTTGTGAAAAGAGGAGATCGAAACTTCGTACAAAGTGGTGAATGGGACGT
CAAAGACATCAACATCAAATCAGTGGAACAGAAATTCCCATGCTGTAGAG
ACAATTTCTCTGCTCTTTCGTATACCGTAGCTTTGTCACGTTTCCCGCAA
TTCTATTTCTTGTATATGTTTTTCCCGATTTTCTCGCAATTCTTTTTGTT
TTTGATGGTTTTTCACATTAGACCCGAATCAGGTGAACGACTGGGTTTCG
GAATCACTATTCTGCTAAACATCACAATGTTTATGACATTCATATCGGAA
AAGCTTCCCGAGAAATCGAACAACCGACCTCTTATTGGCCTGCTCTTCTC
CGTTCTCTTTTTCATCTATTCACTCGGACTCGCTCTAGCCTCTATGACTA
CATTCTTCTCGTCCAGGCTAGGACCAGTCCCTCACTGGTTACGCAAGTTT
GCTGCTCCAGCTGCAACTGAAGAGGCTTTTATTGTTGAAAACCAAACCTC
AGAAAACATTGAAGATGAGGAGATTAATACGACAAAAGATGGACCGAAAA
TCCAGACAATTAGTCGGGGATCCAATTCAGAGGTCACGTGGGCGATGGTA
ATGAGATCATTGGACAAATATCTCTTTTACATTTTCTTGGTCATTTCTGT
ATTGTTACCGATTATTATCGGTCTCTCCTTGGATCAGAACTTTTTTGCAG
GATGGAAAAATATTTTTAATGTTTGAATCGAAACTTCGTACAAAGTGGTG
AATGGGACGTCAAAGACATCAACATCAAATCAGTGGAACAGAAATTCCCA
TGCTGTAGAGACAATTTCTCTGCTCTTTCGTATACCGTAGCTTTGTCACG
TTTCCCGCAATTCTATTTCTTGTATATGTTTTTCCCGATTTTCTCGCAAT
TCTTTTTGTTTTTGATGGTTTTTCACATTAGACCCGAATCAGGTGAACGA
CTGGGTTTCGGAATCACTATTCTGCTAAACATCACAATGTTTATGACATT
CATATCGGAAAAGCTTCCCGAGAAATCGAACAACCGACCTCTTATTGGCC
TGCTCTTCTCCGTTCTCTTTTTCATCTATTCACTCGGACTCGCTCTAGCC
TCTATGACTACATTCTTCTCGTCCAGGCTAGGACCAGTCCCTCACTGGTT
ACGCAAGTTTGCTGCTCCAGCTGCAACTGAAGAGGCTTTTATTGTTGAAA
ACCAAACCTCAGAAAACATTGAAGATGAGGAGATTAATACGACAAAAGAT
GGACCGAAAATCCAGACAATTAGTCGGGGATCCAATTCAGAGGTCACGTG
GGCGATGGTAATGAGATCATTGGACAAATATCTCTTTTACATTTTCTTGG
TCATTTCTGTATTGTTACCGATTATTATCGGTCTCTCCTTGGATCAGAAC
TTTTTTGCAGGATGGAAAAATATTTTTAATGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000165_pilon | genome | sc0000165_pilon:603023..606070 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 661-1368:709 |
| Aaloc | 556-657:1203 |
| Aaloc | 412-555:1486 |
| Aaloc | 301-408:2110 |
| Aaloc | 256-300:2322 |
| Aaloc | 112-255:2708 |
| Aaloc | 1-108:3049 |
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