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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000165_pilon:679784..683980- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037895 ID=XLOC_037895|Name=XLOC_037895|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4197bp|location=Sequence derived from alignment at sc0000165_pilon:679784..683980- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGATGATGGCATTGTGGCACATTTTAAAGAACTTCAGCAAGGTGG
GTAGCATTATCTTGATTTATCAACTAACTTTTTTTTGCAACTCTAGTCAT
CTCTATCATGCGTTTTTTGCTAATAATATGAAATTCAAAATATAGAACTT
CTCCTCATTCCACCATACTCTGGTTTTGAGCTATGTTAAACATAATCCAA
TCAGAATCAAGTTAAGTTCAGTTCTTCTTTATCGACAAAGATTTGTAATA
ACATTTTTATAGGGGGGGGGACATTCAAGTCCTGGAGCCATACAGTAATA
TGTTGTGATATTATTCATTTTAGTCTTTTTTCTTAGAGAAAAAGAAGCTT
CAAAACCGTCTTGACCACTTTCGATTCAGAAGGAAAGATTTAGAATCAAA
ACAAGGCTCAGGTATCATTTCGAAGAGTATAGTTGTATTATATATTCTGG
TACTATTATTATTTTTTTAAATTTCCATAAGCGAAACCAACTCTGGATTG
CTCAGAAATTTAGTATTTAATAGATTCTGTTTTGTTTACTCCGATTTGTG
TTCACTTGCCTGATAAAATGGGCTGTTCCATTAAATTTCCATATAGGGGG
GTGGACAAACCTTTTTAAGGCAAAAAAGGTTCTTAGAAATTACCTACCTC
TTAGAAACCCCCTGGAAAATGGCAAAAGTTGTAAAAGAAGCCTTGAAAAA
TTCTTTTCATACATTTAACGTGAGGGTGGACGAACTAAAATCAGTCTTTT
ACCCCTGGAAATTTTAGAATAAACTTCTACCTCCTGGAAAAATGAAAAAT
ACTCGTTTAGACCCCCCTGGAAATGTTTGTCCACCCCCTGTATGGATATA
AAATGGAATGGCCCAATGACTAGCCCTTTTTGCAATAACTTTGAAAGTTT
TATTGTGTACTTTTTCTTATTTTAGTCACAGACAAAAACAGATTACTCCA
ACAGAAGCATGATAATATGTCAAGTTAGTGTTTTTTCAGACAAAATTTTT
AGCTTTTAAGTACATAATGTTTCATTTTTTTCATGTTTCAAATTTTAATG
TATATGTGTTTACCAGTTGATGCCGTGCAATTTTGAGTTTGTTAAAGAAG
CACACTTTTACTTAGTGTATATACAACACTTTGTCTTTAGTCTAGTTTCA
GTTTCAATACAGTCATTTCTTTGCTTTTGTATTATACAGGAACAATTGAA
ATAGCTAAAAGAAAATTGCAAGAGTCCCAATTACAAGTTGAGAAGTAGGT
TTTTTGCAGTTTCTTTAGTCGTTTTTCAGAAAGACTAAATCGCATATTCA
GTATCAAGACTTGATTGTTTATTGTCTTGCTCAGGGTATCAGAAAATAAA
TTATCAGTCGATTTGAGGACATGAAGTATCTGTTAAAAATGCCCTTGCCT
TTGTTAATGACCTTGAAAATTCAAGATTACTTTTCCAATGGGCTATTCTA
GAAATAGTCTGTACCCCCTATGTTAGGTGTGACATTCAAGGTGGTCTGGA
AAATAAAAAATCCAGGTCTGGATTTTTGAATGATAAAATCCAGTTGGTCA
GTAAAATCGGGTTAAAAATCCAGGGTGACCAGTATAACGAGGTCGAAAAT
CCAGCGTGGTCCAAAGAATTGGGATAAAAAAATCCATGGGGGTCCTGAAT
AAAATCCAAAAAAAAGATCTCAACATAAGGGGTACAAATTTTTTCTGGAA
TAGCCCATTGATATATGTATGTTTTCTTCTTTGTTTTTAGATTACAGAAT
GAGAATGACGAACATCAGGCATACATCAAACTCGTTAAAACTTCTCTCCA
AAAAGAAGAGGATACAAAAGACACCTACCTGTACATTTTTTTTAACAAAG
TTGTGAATGAGCTTTTTATTGGGAAAATGTTTTTCAAAACAAAAGCAAGG
GATTTAATTTATTACATACTTTGTCAAATATTGATAAAAAGCCATTACCA
CCCCTTTTCCATTGCATTGTTGATGTGATAGACACCCTTACTCAGTTTTC
CAATTTAATATTGTCTTTTTATGATGAATAGTTTTTTTGTTTTCAGGATA
AAATTACAGAATCAGTTTGATGAACTATCAAATGATTTTAGAGGTGCAAA
AAAGTTTTACGTGAGTGTAATAAATCATTTTTGAGAAGCGATTTTCTTTG
TTAGGAGGATGTTTTTGTTACTGATTATACCTTCAAGATTAATAATTTCT
TGCTTTTAATTTTGCTGATCGATTTTGCTTTGTTGTCAGAACATGATTCA
ACGATTTCATGTGAAGTCGAGCATTTGATTGAGCAGTATTACTTCTTTTC
TCATAAATTATTCACTTTTCCTCGTATAGGAGGATGAGGAGCTGGAAAAA
GAGGTCGAACATTGGAAAAACACCTGCCAAAGGAGAAAGATCAGTAGTAA
GAACCATTTTTCTAAATCAACCCCTAAAAATGAGGGTTGCCACTTTTTGA
TAATGAAGACAGGGAAAGTTCTCTTATTAAAATAATAACTCACATTTAGA
ACCTTCAAATTCTTTGGGAAAGTATCATTTATTCCTACTGATAATTATCT
TTTATCGTAGAATTTATATATATGATGGCTGACAAAATGTGTTTGGAGTA
ATGCCGTTTTTCCCTATTTTGCAATTAATTTTGTGACGTGTAAATAATTT
TCAACAGGGGGATTCGACCATTCGTAATTTGAATAAAAAAGACAGAAAAC
AGTTGCTTCTGAATGAAACAATTCCCCCTAATAAAGGTGCCGCAAGCTAA
AATCGCTAGCGAAAAAAAAAACGCTGCAAATATGACTTCAGACACGTACG
GCTATTATTATATAGATAAAAATAGATATAAAAAAATCCAAAATCATTGG
CGCTTTTCGAGATTTCTTCATTTCTTTCTTTAACCAAATACTGCTCTAAC
GGTACTTATTCTAATACTTATTTCTACCCTAGATAAGAACTTTAATCGTC
TAGCTCCTGTTGATGCGTTTAAGTAAGAAAACCAATTATTGTGGATTTAT
TTTTAGTTGAAACTGGTGCCGAATTGGTGAATCAGATTTCTTCTCAATTG
AAAGAAATGAATTTATCAAAGAGTAAGAAATCACTGCTTTTTATACATTA
ATCTCCCATAATTTTCAATAAAGACTTTTTAGTCGAATTTTGATTTCTGT
TTATTCGTTTGTTTCGAATTTTAAAGGTTTTGGTTGCACAAGTTTATAGT
TCTTCTCCTCATAAATCAGTTATGTAATGAAGTAAATTTATTTTTAGCTG
ACTCAGACGAAAAACCTGCGAAGAGTTCTTGGAAAGAAGTGAATACCCAT
CAAGACTTTCTTACGTAGGTGGTCTGTCCTTATATCTGAATAACGCGATT
AAGAAATTTTATCAACAAATGCTCTAAAATTTCTTCGAAAATGGTTTGAA
GCCTTACATGATGTTTTTGAAAATGTGTTCTATTTTTGCCAGAAAGGGAT
TTATTAGGCCAAAATAAAAATAGTGTTGAAGGTCAGAGTCCTCACGTTGA
AATAGTTTTTATTGTGGGAACTCCATGGGGGGTATCGACTTTCTTCTTCG
TTTAATACGAGAGTTGAATCCTGATTAAGATGCAATAGAGTTTGACGGTT
GGTTTTAATAGTTTTTATTTAAGATCGTTCTAGGGGATTTCGATTATCCC
TTGTTTAGTTCTGATTGAAGCTTTTGGGTTCATTTTCTGAGTTCTTTCTT
TTGTCTTCTTGATTTTTTCCTTATTACAATAGGAGCTTATTTCAAGAAGA
TTTCTCAAAGCTAGAAAGCCTGATAACACAAGAACAAAACAAATCCCAAC
ATTTAGGGGAACGGTTTGTTATTTATCTTATGTTAAAATCTTTGTTTCAT
CATCCAAAACTTGACTTTATATCCATTATGTTTTCCTTTTTGATCAAAAA
AGATCCAAAAAATTATAAAAAGTATAAGTGTGAAAACAAAAGAATGAAAA
ACTTATAAGAAAAAATAATGTCAAAAAAATACAAAAGGCAGTATTTACAT
AATTCATGAGGCATCTTTTCCTTTTTTTTATTATTTGCAATATTTTCACT
TTTAATGTAAGGAGAGGAAAATCAATATACCATATTTCCCTCGTTTACTT
TGTCCCTTTCTTTTCTCCCCTCAGTATAACAGTCGTAATGGAGCAACTGA
AGACCAAACAAGACGAACTGAAAAAAATACACAACACAAATGTCTGA Coding sequence (CDS) from alignment at sc0000165_pilon:679784..683980- >XLOC_037895 ID=XLOC_037895|Name=XLOC_037895|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1464bp|location=Sequence derived from alignment at sc0000165_pilon:679784..683980- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGATGATGGCATTGTGGCACATTTTAAAGAACTTCAGCAAGATGA
CAGATGATGGCATTGTGGCACATTTTAAAGAACTTCAGCAAGAGAAAAAG
AAGCTTCAAAACCGTCTTGACCACTTTCGATTCAGAAGGAAAGATTTAGA
ATCAAAACAAGGCTCAGAGAAAAAGAAGCTTCAAAACCGTCTTGACCACT
TTCGATTCAGAAGGAAAGATTTAGAATCAAAACAAGGCTCAGTCACAGAC
AAAAACAGATTACTCCAACAGAAGCATGATAATATGTCAATCACAGACAA
AAACAGATTACTCCAACAGAAGCATGATAATATGTCAAGAACAATTGAAA
TAGCTAAAAGAAAATTGCAAGAGTCCCAATTACAAGTTGAGAAGAACAAT
TGAAATAGCTAAAAGAAAATTGCAAGAGTCCCAATTACAAGTTGAGAAAT
TACAGAATGAGAATGACGAACATCAGGCATACATCAAACTCGTTAAAACT
TCTCTCCAAAAAGAAGAGGATACAAAAGACACCTACCTATTACAGAATGA
GAATGACGAACATCAGGCATACATCAAACTCGTTAAAACTTCTCTCCAAA
AAGAAGAGGATACAAAAGACACCTACCTGATAAAATTACAGAATCAGTTT
GATGAACTATCAAATGATTTTAGAGGTGCAAAAAAGTTTTACGATAAAAT
TACAGAATCAGTTTGATGAACTATCAAATGATTTTAGAGGTGCAAAAAAG
TTTTACGAGGATGAGGAGCTGGAAAAAGAGGTCGAACATTGGAAAAACAC
CTGCCAAAGGAGAAAGATCAGTAGAGGATGAGGAGCTGGAAAAAGAGGTC
GAACATTGGAAAAACACCTGCCAAAGGAGAAAGATCAGTATTGAAACTGG
TGCCGAATTGGTGAATCAGATTTCTTCTCAATTGAAAGAAATGAATTTAT
CAAAGATTGAAACTGGTGCCGAATTGGTGAATCAGATTTCTTCTCAATTG
AAAGAAATGAATTTATCAAAGACTGACTCAGACGAAAAACCTGCGAAGAG
TTCTTGGAAAGAAGTGAATACCCATCAAGACTTTCTTACCTGACTCAGAC
GAAAAACCTGCGAAGAGTTCTTGGAAAGAAGTGAATACCCATCAAGACTT
TCTTACGAGCTTATTTCAAGAAGATTTCTCAAAGCTAGAAAGCCTGATAA
CACAAGAACAAAACAAATCCCAACATTTAGGGGAACGGAGCTTATTTCAA
GAAGATTTCTCAAAGCTAGAAAGCCTGATAACACAAGAACAAAACAAATC
CCAACATTTAGGGGAACGTATAACAGTCGTAATGGAGCAACTGAAGACCA
AACAAGACGAACTGAAAAAAATACACAACACAAATGTCTGATATAACAGT
CGTAATGGAGCAACTGAAGACCAAACAAGACGAACTGAAAAAAATACACA
ACACAAATGTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000165_pilon | genome | sc0000165_pilon:679784..683980 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 661-732:73 |
| Aaloc | 580-657:465 |
| Aaloc | 514-576:949 |
| Aaloc | 448-510:1190 |
| Aaloc | 379-444:1869 |
| Aaloc | 316-378:2151 |
| Aaloc | 226-312:2457 |
| Aaloc | 172-222:3007 |
| Aaloc | 124-168:3271 |
| Aaloc | 49-120:3860 |
| Aaloc | 1-45:4198 |
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