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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000066_pilon:65598..69422- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037876 ID=XLOC_037876|Name=XLOC_037876|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3825bp|location=Sequence derived from alignment at sc0000066_pilon:65598..69422- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTGATTTATACAATGATTCTGATGTCAAAGGCCCACCTTCGAAGAG
AAGAAAGTGCGTGTTTGACAAAAAGAAAAGAGTCGTCGTTGACACTCCAT
ACATTTGTAACCACCTTGGTATTGACGAGGAGGAAGTCTTAGAATTATCC
AAAAACATCTCTTCAATCGCAACACAGAAAAACAAAGACGAGAAACTCTA
TCTGCATTACGTGGAAAAACTTTTTTCATCAGGCTGTTTGAATTGGAGAG
TATTAAAGGCTCCATCTCTTCAAATAATCTTAATGAACAACATTGATCCG
ATGACTGGTGAATTTAAAGTAAGTCAGTGCTTTGAAATTTAAAATTTGAA
CAGTAAATCCCAGTGAAAAATGCATTTCAGCCAAATCCGCCAAATCCGCC
AAATTTCTTTCCGCCAAAATTTCTTCCTATAAGGTATTTCGTTTTTTAGT
GCGTTTTTATTTCTTGGGCTTAACTACTCTATGGGAATCCGATACCATTA
GACCATGCAGGGAAGAGTTGTCTTTTATTTCTAATCTTTTCTACTTTAGG
ATAAAGATTTTGTGCACGTGACAATCAAAGGAACGACGACAGGTCCAATC
ATCACTTGCTCCTGCGCAGTGTTCGACCTCCTGCAGTCCACAGTAAACGA
AGAAGATGTAAACGGTACAGTGGGTTTTCGAGGCTTGAAATGCTGTCATT
CTCGGCTCGCAGAAGATTTACTCGTGCTCAAACCCATGAATTTCGTGCCG
AATGAACTCGAGGAAACTTCAATAGGGAGACATTATTTTAATGGAGATTC
AATTTCCAAGGCAGAGGAATCCATTAATAAGCCAATCCTACAGCTACCTG
GAAAAATAAACGTTTTCAGGTTCGCTGTAGTAATCGAAAACAATGAGGCG
GAACTGATTACGATTTGCAGGAATAAAAAGGGACACAACACAATAACGTG
TCATAACTCCTATTGCCGTTCAAAAATTTCCAAGGAGCGGTACTTGGATA
CGTTCCAAAAATCTGATAACCTTTGCCCACACCTTGAGTTTCTAAGGAGT
TCTTTTGATGTGACCACCCTGAAGTTCACAGAAGGTGTGCAGGACGAAGA
TAAAAATGAAAACGAAAACGACAACGACATGGAATGTGATGATTTTGTAT
CCGACGCTGAACCTATTGAGGTATTGCTCGCTTTACAAACTTTAAATCTT
AATTACAAAATACACTAAGGTCAAATTAAGAGCTGAATATGATAAAAAAA
ACACAATATGTACAACTGATAAAAATAACAAAATAACCCGATCAGGGTGT
CTAATCCACACACTATCATAGTGTAACCATAGAACTATCATCAGATAGAA
TAAATACAAGCTTTTTTCCTCAAAATGAAGCGTGTCTATAAGGGGTCCCT
TAGCTGCAATGCAAAATTTCAGATTGTAAGCTGAAATAATTTTGTAAATA
TCAAACATTTTTTTAAATGAAATCTTTCTGAACTGAGACAAAATGTAGTG
ACAATATACCCTTATGAAGAGGTTTTTATCCATGCTTCAGATTTTGAGAA
ACTGTTTTTACGACCAATAATCACTTTTAACAAAAGGAATCTGAATAGAC
GATGACGCAGCCAAAGTAAGATGTCATTCTATATGATAACAGTTCACTAG
TGTAACATAACATTTTAAGTCGTTATTCCATCTCATTTTAGTGGGAAAAG
GTGTTCGACGAAGATACTGGTCGATGGAAATTCCATGAGAAAGCTCCAAG
CGTTTGGCGCGTCAGCGATAAGAGGGACGAAATTTATCAAGAAAACATCA
AAAGGCGGGCCATACAAATTTTACTTGGTCAGGAAATCAAACTCATTCCA
TCAAAGAATGGTAATTGTGGATGTGAGGTAAGCTTAATTTACGTTTTTCC
AATGTCAATGTAATCAAATCAAAGTTAGTTATAAAATCTATGAAAATCTT
GTGGATTAAAAGTTAACTGACTTGATTTCATTTTAATGCAAAAATAACCA
ATTGTTGTGTCGATAGCCTATTGTTGTGTCGATAGCCTATTGCGTGATAC
CATTTGTTATAAGCGCAGTCATATCATATCCACTTCCATGAAAGTCATTC
TAACATTTCATAACAAGTTTTATCTTGTTTATTTAGGGTGGATGGTACAA
CGAAGAGAATCCAGACGGTCATATAATGCCTCGCGGGGAAACTATCGTTT
ACTCTCTACCATGGGTGCAGCCAAAGGTCGACTTTACGAGCGAACGTGTA
TGGGTGGCAGCTGCTTTCGGGACTATGACGGGTCTGAAGACAGTTTGTTT
CGATCTAGCACAACAGTTGCCTGCGGGTACGAAATAGGCTGGGAGTTCGT
GGACAGCGTAATGACCAGCAAACAAACATTTTCAGGGTTTGTCAAGGTTG
TCAAAAACAGGTACACAGACTACCAGTCTCCATGTGAATTTATGTCCAGG
AACACTCTGATCAAGTGGTGGTTCAGCTGGGCTTCAGCAATGGATCTGGA
CTTTGTTCAAAAATGTCCGAGTTGTGGATCAGATCCAAAATACCTGGCCG
CCGATGCCACAAAGATCGGAATTACATTTAAGCAGATTAATGTGACACCA
ATTGAGCAGCCTGTCGGAGATTCTTTTCCTACAAAAAGAAGGAGATATGA
CCGAACCTTCATTAACAACCGCAACAGTAAATCAAGAATAGTCGTCAACG
AGGCTCTAAATTTAATTTCAAGACATTTTTGTGGCAAAGTCAAGGCCAGT
AAAGAAGATTTAGAAGTAGCGAAAAAAACACTGATGAGATCAGAAATCCC
TGTGGTGCGTTTAGTGACAGAAAAACTCTTTGAGTGTGATATCTCAACTC
TCGAAAGAACATCATTGAGTAAATTAATAGTGATATTAACCAAAGATACA
AGTTTAACTAATCTAATTCCAAAAAGATACCTACCTCAATTTGAAACTTT
GAACACTTTATTGGCGTCGGTGAATGCAATCGAAGAGAACAGTGATCTGT
GGCGAGTTGTAGAAGAATTCCATCGGTCTTCAAAGTTCTTCTTTCCTGAG
CTCGGTGATTGGCTGTTCATCGTAACATCTCTCTCCAAAGGATCTGCACC
TAAAACATACGGAGTTGAATTTCTTAGATATCTTTTTCTTCTAAGAAAAG
AGATAATGGATGATGAGGTTCCCCCTGAAGATCCAAGATTAGTCAAGAAA
TATAATCCTCCAAGAGACGGGAGAGCGTACTATTTTCATGATGGGGACCA
GATTCGGGAAACGAGAAAGTTTAGCGCCGACAAAGACAACAAAAGGTTGG
ACAACTTTGACGATCTTCCTGACAAAGACGTTTGTTCAAAGATTTTTCCA
ACTGCCAAAGGCAGATCCTATTTGTTTTTGTGGTTTTGCACACGGGCACT
GTTACGGATATCATATAATTCCCCACGCAGAAGGCCGAAAAGATGCTGCA
GCGTCTCTATACGCTTTCTTGAAAAAGGCACCATATGAAATTTTCTATGA
CTTTGCTTGTTCATTGGAGGAGTATGGTAGGAACAGGGAAAGTGGTTTCT
TCCAAGCCACCCGCTTTTTCCACGATATCTTCCATGGATATGGACATAAA
TGTTCTGATGTGTTCAAGTCAAACAGATTGCTTGGATTCAACGGCTTGAA
CACATCCATTTGCGAGCAGTTTAACAGTTTTCTGCAGTGCATCAAGACAT
CAGGGAAACTGATGACACAGGAGCATTTCACCTTTTATGTCCAATTTTTC
ATTTACCAATGGAATCTGGCTCGAAAAGACTCGTTTGCAAAAATAATTGC
TGTTGCAATCGCCTGTACCAAATAA Coding sequence (CDS) from alignment at sc0000066_pilon:65598..69422- >XLOC_037876 ID=XLOC_037876|Name=XLOC_037876|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5628bp|location=Sequence derived from alignment at sc0000066_pilon:65598..69422- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTGATTTATACAATGATTCTGATGTCAAAGGCCCACCTTCGAAGAG
AAGAAAGTGCGTGTTTGACAAAAAGAAAAGAGTCGTCGTTGACACTCCAT
ACATTTGTAACCACCTTGGTATTGACGAGGAGGAAGTCTTAGAATTATCC
AAAAACATCTCTTCAATCGCAACACAGAAAAACAAAGACGAGAAACTCTA
TCTGCATTACGTGGAAAAACTTTTTTCATCAGGCTGTTTGAATTGGAGAG
TATTAAAGGCTCCATCTCTTCAAATAATCTTAATGAACAACATTGATCCG
ATGACTGGTGAATTTAAAATGCTTGATTTATACAATGATTCTGATGTCAA
AGGCCCACCTTCGAAGAGAAGAAAGTGCGTGTTTGACAAAAAGAAAAGAG
TCGTCGTTGACACTCCATACATTTGTAACCACCTTGGTATTGACGAGGAG
GAAGTCTTAGAATTATCCAAAAACATCTCTTCAATCGCAACACAGAAAAA
CAAAGACGAGAAACTCTATCTGCATTACGTGGAAAAACTTTTTTCATCAG
GCTGTTTGAATTGGAGAGTATTAAAGGCTCCATCTCTTCAAATAATCTTA
ATGAACAACATTGATCCGATGACTGGTGAATTTAAAGATAAAGATTTTGT
GCACGTGACAATCAAAGGAACGACGACAGGTCCAATCATCACTTGCTCCT
GCGCAGTGTTCGACCTCCTGCAGTCCACAGTAAACGAAGAAGATGTAAAC
GGTACAGTGGGTTTTCGAGGCTTGAAATGCTGTCATTCTCGGCTCGCAGA
AGATTTACTCGTGCTCAAACCCATGAATTTCGTGCCGAATGAACTCGAGG
AAACTTCAATAGGGAGACATTATTTTAATGGAGATTCAATTTCCAAGGCA
GAGGAATCCATTAATAAGCCAATCCTACAGCTACCTGGAAAAATAAACGT
TTTCAGGTTCGCTGTAGTAATCGAAAACAATGAGGCGGAACTGATTACGA
TTTGCAGGAATAAAAAGGGACACAACACAATAACGTGTCATAACTCCTAT
TGCCGTTCAAAAATTTCCAAGGAGCGGTACTTGGATACGTTCCAAAAATC
TGATAACCTTTGCCCACACCTTGAGTTTCTAAGGAGTTCTTTTGATGTGA
CCACCCTGAAGTTCACAGAAGGTGTGCAGGACGAAGATAAAAATGAAAAC
GAAAACGACAACGACATGGAATGTGATGATTTTGTATCCGACGCTGAACC
TATTGAGGATAAAGATTTTGTGCACGTGACAATCAAAGGAACGACGACAG
GTCCAATCATCACTTGCTCCTGCGCAGTGTTCGACCTCCTGCAGTCCACA
GTAAACGAAGAAGATGTAAACGGTACAGTGGGTTTTCGAGGCTTGAAATG
CTGTCATTCTCGGCTCGCAGAAGATTTACTCGTGCTCAAACCCATGAATT
TCGTGCCGAATGAACTCGAGGAAACTTCAATAGGGAGACATTATTTTAAT
GGAGATTCAATTTCCAAGGCAGAGGAATCCATTAATAAGCCAATCCTACA
GCTACCTGGAAAAATAAACGTTTTCAGGTTCGCTGTAGTAATCGAAAACA
ATGAGGCGGAACTGATTACGATTTGCAGGAATAAAAAGGGACACAACACA
ATAACGTGTCATAACTCCTATTGCCGTTCAAAAATTTCCAAGGAGCGGTA
CTTGGATACGTTCCAAAAATCTGATAACCTTTGCCCACACCTTGAGTTTC
TAAGGAGTTCTTTTGATGTGACCACCCTGAAGTTCACAGAAGGTGTGCAG
GACGAAGATAAAAATGAAAACGAAAACGACAACGACATGGAATGTGATGA
TTTTGTATCCGACGCTGAACCTATTGAGTGGGAAAAGGTGTTCGACGAAG
ATACTGGTCGATGGAAATTCCATGAGAAAGCTCCAAGCGTTTGGCGCGTC
AGCGATAAGAGGGACGAAATTTATCAAGAAAACATCAAAAGGCGGGCCAT
ACAAATTTTACTTGGTCAGGAAATCAAACTCATTCCATCAAAGAATGGTA
ATTGTGGATGTGAGTGGGAAAAGGTGTTCGACGAAGATACTGGTCGATGG
AAATTCCATGAGAAAGCTCCAAGCGTTTGGCGCGTCAGCGATAAGAGGGA
CGAAATTTATCAAGAAAACATCAAAAGGCGGGCCATACAAATTTTACTTG
GTCAGGAAATCAAACTCATTCCATCAAAGAATGGTAATTGTGGATGTGAG
GGTGGATGGTACAACGAAGAGAATCCAGACGGTCATATAATGCCTCGCGG
GGAAACTATCGTTTACTCTCTACCATGGGTGCAGCCAAAGGTCGACTTTA
CGAGCGAACGTGTATGGGTGGCAGCTGCTTTCGGGACTATGACGGGTCTG
AAGACAGTTTGTTTCGATCTAGCACAACAGTTGCCTGCGGGTACGAAATA
GGCTGGGAGTTCGTGGACAGCGTAATGACCAGCAAACAAACATTTTCAGG
GTTTGTCAAGGTTGTCAAAAACAGGTACACAGACTACCAGTCTCCATGTG
AATTTATGTCCAGGAACACTCTGATCAAGTGGTGGTTCAGCTGGGCTTCA
GCAATGGATCTGGACTTTGTTCAAAAATGTCCGAGTTGTGGATCAGATCC
AAAATACCTGGCCGCCGATGCCACAAAGATCGGAATTACATTTAAGCAGA
TTAATGTGACACCAATTGAGCAGCCTGTCGGAGATTCTTTTCCTACAAAA
AGAAGGAGATATGACCGAACCTTCATTAACAACCGCAACAGTAAATCAAG
AATAGTCGTCAACGAGGCTCTAAATTTAATTTCAAGACATTTTTGTGGCA
AAGTCAAGGCCAGTAAAGAAGATTTAGAAGTAGCGAAAAAAACACTGATG
AGATCAGAAATCCCTGTGGTGCGTTTAGTGACAGAAAAACTCTTTGAGTG
TGATATCTCAACTCTCGAAAGAACATCATTGAGTAAATTAATAGTGATAT
TAACCAAAGATACAAGTTTAACTAATCTAATTCCAAAAAGATACCTACCT
CAATTTGAAACTTTGAACACTTTATTGGCGTCGGTGAATGCAATCGAAGA
GAACAGTGATCTGTGGCGAGTTGTAGAAGAATTCCATCGGTCTTCAAAGT
TCTTCTTTCCTGAGCTCGGTGATTGGCTGTTCATCGTAACATCTCTCTCC
AAAGGATCTGCACCTAAAACATACGGAGTTGAATTTCTTAGATATCTTTT
TCTTCTAAGAAAAGAGATAATGGATGATGAGGTTCCCCCTGAAGATCCAA
GATTAGTCAAGAAATATAATCCTCCAAGAGACGGGAGAGCGTACTATTTT
CATGATGGGGACCAGATTCGGGAAACGAGAAAGTTTAGCGCCGACAAAGA
CAACAAAAGGTTGGACAACTTTGACGATCTTCCTGACAAAGACGTTTGTT
CAAAGATTTTTCCAACTGCCAAAGGCAGATCCTATTTGTTTTTGTGGTTT
TGCACACGGGCACTGTTACGGATATCATATAATTCCCCACGCAGAAGGCC
GAAAAGATGCTGCAGCGTCTCTATACGCTTTCTTGAAAAAGGCACCATAT
GAAATTTTCTATGACTTTGCTTGTTCATTGGAGGAGTATGGTAGGAACAG
GGAAAGTGGTTTCTTCCAAGCCACCCGCTTTTTCCACGATATCTTCCATG
GATATGGACATAAATGTTCTGATGTGTTCAAGTCAAACAGATTGCTTGGA
TTCAACGGCTTGAACACATCCATTTGCGAGCAGTTTAACAGTTTTCTGCA
GTGCATCAAGACATCAGGGAAACTGATGACACAGGAGCATTTCACCTTTT
ATGTCCAATTTTTCATTTACCAATGGAATCTGGCTCGAAAAGACTCGTTT
GCAAAAATAATTGCTGTTGCAATCGCCTGTACCAAATAAGGTGGATGGTA
CAACGAAGAGAATCCAGACGGTCATATAATGCCTCGCGGGGAAACTATCG
TTTACTCTCTACCATGGGTGCAGCCAAAGGTCGACTTTACGAGCGAACGT
GTATGGGTGGCAGCTGCTTTCGGGACTATGACGGGTCTGAAGACAGTTTG
TTTCGATCTAGCACAACAGTTGCCTGCGGGTACGAAATAGGCTGGGAGTT
CGTGGACAGCGTAATGACCAGCAAACAAACATTTTCAGGGTTTGTCAAGG
TTGTCAAAAACAGGTACACAGACTACCAGTCTCCATGTGAATTTATGTCC
AGGAACACTCTGATCAAGTGGTGGTTCAGCTGGGCTTCAGCAATGGATCT
GGACTTTGTTCAAAAATGTCCGAGTTGTGGATCAGATCCAAAATACCTGG
CCGCCGATGCCACAAAGATCGGAATTACATTTAAGCAGATTAATGTGACA
CCAATTGAGCAGCCTGTCGGAGATTCTTTTCCTACAAAAAGAAGGAGATA
TGACCGAACCTTCATTAACAACCGCAACAGTAAATCAAGAATAGTCGTCA
ACGAGGCTCTAAATTTAATTTCAAGACATTTTTGTGGCAAAGTCAAGGCC
AGTAAAGAAGATTTAGAAGTAGCGAAAAAAACACTGATGAGATCAGAAAT
CCCTGTGGTGCGTTTAGTGACAGAAAAACTCTTTGAGTGTGATATCTCAA
CTCTCGAAAGAACATCATTGAGTAAATTAATAGTGATATTAACCAAAGAT
ACAAGTTTAACTAATCTAATTCCAAAAAGATACCTACCTCAATTTGAAAC
TTTGAACACTTTATTGGCGTCGGTGAATGCAATCGAAGAGAACAGTGATC
TGTGGCGAGTTGTAGAAGAATTCCATCGGTCTTCAAAGTTCTTCTTTCCT
GAGCTCGGTGATTGGCTGTTCATCGTAACATCTCTCTCCAAAGGATCTGC
ACCTAAAACATACGGAGTTGAATTTCTTAGATATCTTTTTCTTCTAAGAA
AAGAGATAATGGATGATGAGGTTCCCCCTGAAGATCCAAGATTAGTCAAG
AAATATAATCCTCCAAGAGACGGGAGAGCGTACTATTTTCATGATGGGGA
CCAGATTCGGGAAACGAGAAAGTTTAGCGCCGACAAAGACAACAAAAGGT
TGGACAACTTTGACGATCTTCCTGACAAAGACGTTTGTTCAAAGATTTTT
CCAACTGCCAAAGGCAGATCCTATTTGTTTTTGTGGTTTTGCACACGGGC
ACTGTTACGGATATCATATAATTCCCCACGCAGAAGGCCGAAAAGATGCT
GCAGCGTCTCTATACGCTTTCTTGAAAAAGGCACCATATGAAATTTTCTA
TGACTTTGCTTGTTCATTGGAGGAGTATGGTAGGAACAGGGAAAGTGGTT
TCTTCCAAGCCACCCGCTTTTTCCACGATATCTTCCATGGATATGGACAT
AAATGTTCTGATGTGTTCAAGTCAAACAGATTGCTTGGATTCAACGGCTT
GAACACATCCATTTGCGAGCAGTTTAACAGTTTTCTGCAGTGCATCAAGA
CATCAGGGAAACTGATGACACAGGAGCATTTCACCTTTTATGTCCAATTT
TTCATTTACCAATGGAATCTGGCTCGAAAAGACTCGTTTGCAAAAATAAT
TGCTGTTGCAATCGCCTGTACCAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066_pilon | genome | sc0000066_pilon:65598..69422 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2392-2829:439 |
| Aaloc | 2383-2385:442 |
| Aaloc | 1204-2382:1622 |
| Aaloc | 1138-1203:1690 |
| Aaloc | 952-1137:2135 |
| Aaloc | 898-951:2710 |
| Aaloc | 319-885:3277 |
| Aaloc | 1-318:3826 |
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