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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:89467..94798+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037853 ID=XLOC_037853|Name=XLOC_037853|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5332bp|location=Sequence derived from alignment at sc0000001_pilon:89467..94798+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATATCTTGCTTCTCTCAATCGTACTGCTGATCCTATCTTTGGATAT
AAAGGCTGATGCATTGGCTAATTATGATGATTTACCACGTCTATCAAAGC
AAAGGAACCAATGTATCCCAGTTGAAATTCCACAATGTAAACGTTGGTAT
GACCAAAGAAGACCACCAAACATTTATACAGCTACCACAGCTGAATACCG
GAATGTGAAAAGTCTTGTTTCACAGTTATCTTTATTACCAAAAAATTATA
GAGAATGTGTAAATGACGCTACATTTTTACTGTGTGCACTTTATTCACCA
GTCTGTATTAAAGGAAGTAAACCGTTGAAACCTTGTAGAGAGTTATGCGT
TAAATGGCGAAAGAATTGTCGAAGATTGGATATTTTTAGTAATGTCGCTC
TTCCTGACAAGCTGAGAGATTGTAATGAATTGCCAGAGTTTCATAATTCA
ATGTGTATACAACCAAGCAGTTTCATAACCAAAGAACAAGGTATGTTTCC
AGGGACTATGGCATCAGTTGGGCACATACCCTGGTTTGagcatatttttt
caaagcaaaaggAAAATCTTCTAATTCGTGATATTTATGACATAAATTTA
TGGGAGCGCCTCGGTTTTTGTCAATAATAGGAAATTTTAAACAACTTTTC
TCTAACCTAAATTGGTAAAATCCCGGGATGTTTCCGTATTTAAACTCGTC
ATGAAAATCATGAATCCATGTatagaaattttgagaaaagtttaGTTTTA
GGCATTTACAAAAGTAAAGTTGCCGCTGCAAACTGCTCTCGATGCGCTAT
AGACAATCACACCCCTTTGAACCGGTGGAACCTCCTGTCTCAATTAAAGG
ATTGATAAATTCGATTATATTATCCCGGTGAAAGAAATAGCCTAAGGTCC
AACCCCCTCTTTAGAAAACTACTCTGATTCTAATCTCAACTTGAAAACAC
ACAAATATATGAGAATCCTCCCATAGGTCGTTGAGTTGTAAACAAAAGAT
AGGGATTTTCAATTAAGCTTGGTCGGTAAGTTTGTATTTGGCATCTCCAT
TTTATCCCATCGAGTTATTGAGACCGGGTTTTTTAATCCTAATGTGTGAT
TAATTTATGACTCTATTCTAATTTGCCGTCTCAAGTACGAAGTCTTTTCC
TAATAGAAACAATAAATATCTGTTAGAATATCTTCCTTAAATGGGAAATT
TAAACTCATTAGTTTCCATGCCTCCTTCTTTCTTATTAGGTCATTGATTC
AGGGATCTACATATACATCAGTATCTTTCCACATACACATGTTTTGTATC
ATGTTAAACCTAAAAACGCCTCTGCCTCACTCGTCTCACTGCACCAGTGG
AGCTTCTTTTCACAGTGAAATGAAActttctatcaaaatcccaatggtgA
TAGAAATTATCTTTCTCAGCTATTTTCCCTTCTCAAATCTCAAACAATAA
TAGACACATAAGGCATAGTTTATTGGATAGATCTTGCAGTGAACACGCCT
TTAGTATCGAAATAAATATATGTtacattataaaaataaaattggttACA
CTAAGTATTACAGTGGTCATTTGTGTAAATTTTGACATCACGCTagctaa
taataataaaaaatacttttttagaaTGCATGGTTATTGTTAATATCCTC
TAAAGTAATATACTTGTATTgttgaaataattttacatGTTCAAATTCAT
CAAATGAAAATATGTGTATAATTACGTAGAACTTGAGAATAACTAAATTG
TACTGTGACGAAGCATGTAGCGTAAAACCCCCAGTGGCTGTTTATTCTGG
AGGAAACATTATCCCCGACCAAGGCAGCCGTCACGCCGACCTTCGGAGGT
TAAAGGTCCTCCCACTTTATAATGTGAAATATAACGTAaataattcaaaa
cattttatagTTTGGTTTCTGGTATAAAGTTCTTTCGTCGTTTCAAATGT
CCACGTTAGAGTGTCGAATTTTTGTAATGTAACGTATTTTGCAACTGTGT
AATTCGAATGTATGTTTCAATGATAGTTGTGTCCCGGTATCGCTCCAGTA
GAACATCTTGATCGTCGGGTCATGGTTGCCCAGCATTGATAAACGGGTTT
TCCAGGTTCAGGAGCGtgtaagaaaaagaaatagcATTAATGTTATAACA
GTAAACTTAAATGTGAAACTTAACTTAGTTCAAGGCGTATGCAAGAGCAA
GGATTGACAAGCTGACAAGCAGCTTCTTTAAAGCATATTGCGCATGCGCA
GTTTGTTCCAATCTGCGCAAGATGGTAGATTTTCGTACGAAAAACGCGGA
GAAGCTCGATTTCCACCTTTCTTCGATCGTTGGAAATCACACTGTTCTTA
GGTaaaaaaaTCTAACTAGATGTGGATGGTTTATGAGTGCAATTTTTTCA
TTGAACTTttaatgaggcccccccagcggcacccttAATcttgccatcac
gcaaaaaaattttctccatcatgCATCAcgaaaatttgtcatcacgcaaa
aaatagtgaaaaatagcccaaatcacgcatcacgcctcaaatttttgccc
tatcacgcatcacgccatcacgccaaaaaaaaatctccaatcacgccatc
acgcaagaaaaaagtcccaatcacgccatcacgcaaacggctgggggggg
gctcttaaatgggatgaaaaaagattttccagtTGGGTTGAAATTGTACG
GAATCCTTTCCACCgggaatgaaaaatttgaacaaatctTTCAGTGAGAG
GGGGatcccaacgggtctgtgacacaggggtctaaaaaacggggtttttt
tagcttaaaatttaCCAATTTTGTTTGAATCAGTTTAAGTGGGATGCATC
CCGGGGGAGGCACTCAGGCAAACGGGTCATGCCGCTGATCAGGGCCTCTT
TGTTAGGTTCTAAAGACATCTAACAGGGTCcctaatttactaattttcaa
gatttgtaTCGAACAGGAtcgacttttggttattttgaacaatttttaga
GTCCACCCTaataagatatttttcaatcttttgtcaatattttgtcattt
ttgctacttgttgtaggaattttttttcgatttttcgttccgacagggtc
ccaaatttattACATTCATATGACAGGGTCCAAAACTTAAATCTCTTAAA
TGTAATTTCATTTGCAAGATCCAAATGTCTACCGCTGAATATCAAATGGT
TATTCATTACTTTTCAGAAGAAAAGAAATCGAATAAAGATTCTTCAAAAC
ACAAAACGTGCGATTGTAAAGACTTCAAGCAACCAACGCCTAAATATCGT
CATTTTCGGAAAGCAGCCTACGGTCAGTAAATATCTTGTTCAATTCATAT
TAATAGTTTATTTCGGGCAGTCGAAGAAAATTAGAGAAGTTAAGGGTTCA
AATTTGAAGGGGGTAATAGGTTTCCGAGGttccgagccaaagttcgaaaa
ttgaccctttagactgatattttgaaagtttAGCTCCTTTTTGACGAATT
TACGACCCTTTTCCCAATTTTTAgcctaaattttgaaacttaaattCAAA
TTACAAGAGTCTATGGTCCTGGGAGTTTATCctgtttttttcttaatttt
tggattttgcAGAGACTCAATGGCGAATATATAGACCTTTTTGACTCgta
catacccgacacccattcTCTCTCTGTCCTAGGAATGGAACTTACACACG
TTTTTAATAAAGACATCAAAGgttttgaagctttgatgagatgtttttaa
ctttttgagttttgagccaacaatgtttttaagttgttttgagtaatttt
ttcttatatattttgttcaaataaAGTACGTAAAGAGGGAAATTAAGCCA
AGTTCAAGTAGAAATAAAGGTTTTCCCACCGAATGGGTAAATAGCTATGA
ATCGATTGCAGCTATCATAAATGGAAAactatactccaatttttgtctcc
gctgaaaataatcaaatatgtAACAACCTCACTGCAAAACATGTGCTTTC
TTTCAATCCCCCTGAATTCTTTGATACGtgaaaacaattgaattcgAATC
CCCGGCAATAAAAAACATTATCCAATCCACATCGactttcagtccgttat
ttttacccccccccccccacaagcTGAAAAAATCTTACGGGGTCTGTAAg
aagtaacctgataacagctgttcataattttcttgcgtgcacggtaaacc
tctgaaggcacttcaaaattatacatctgaggaaaatagtcctcccgcgg
aaaattttacaacaagaatcttgttgtgcgccatgcgccagaaagtcaaa
aattaatacggcgccctattcataaacacaatgacgcaactttgttgtca
tccccagtccttttagacgaacgcggtccttacgatttcgagattgcata
ttcgtcagattgtatgttttcacccattcctttagagcttcagcgtggtg
ggcagaaaacaaccacaatctgatctcaggttagtgagaagggggtgtgt
ataaggacaacaaaaaaatatgatgCAATCACCAAACTTATATTAAAGTA
TTTTCTTCCTTGATAGTTATTGAAGCAACAATCAATTCAAGAGAAACATT
AGCCAATGGGAACACTAAAATCATACTCGACGTTTTAAAAATCTACAAGC
AAGGTAAATTTTGGCTAAAGTTCATCTACTAACTCCAAGAAGATTTTGCA
GCATACTTCACTTTGGAGACCTCAATTTTATACAAAACCAAAACATTATA
TATGAAATGTAGTATTACCGTGAATCTTATCGATTCCGTCCGTTTTGAGG
GTCATTTTTCTTGATAACAGGGTAGATATTATAGTTTCTAGGGCGTTTGG
AAGTTTTTTGTGTTTGCATTCTATGTTCGTGTCATTGCTTaaaaaaaTCA
TACTGCACTTATTTTCCTACAAGACATTCCTGTATCGGTGACCAGGTGGG
GATATCTAAGCCATTGGGGACCCAGATCGGGGAAAGAATTGTAAAGTAAA
CTTTTACCCAGTCCCTTGCTTAGTCCCTTAGCTCGctttttatgatataa
caccctcGATGGTATCGAAAGAGGAAGctgtaatttgaaatgtttttgtt
tgcaGGTAAAATTTCGATCAAATTCGGTAAACTACGGATGTGGTCATCTT
GTTTGTGTCACAAAGACATCCAATATGGCGATAAGAAGTATTTCTTGATT
GTTGACGAAAACCAtcacaaaaagaagaaaaatttagaaatcaGTAAGAC
AACACTCgttcttgatgctacacaatatgaaaataaaattgacaaatGGT
ACAAGAAATGTTTGAAGCGTAAAAGTTGCTAA Coding sequence (CDS) from alignment at sc0000001_pilon:89467..94798+ >XLOC_037853 ID=XLOC_037853|Name=XLOC_037853|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1818bp|location=Sequence derived from alignment at sc0000001_pilon:89467..94798+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATATCTTGCTTCTCTCAATCGTACTGCTGATCCTATCTTTGGATAT
AAAGGCTGATGCATTGGCTAATTATGATGATTTACCACGTCTATCAAAGC
AAAGGAACCAATGTATCCCAGTTGAAATTCCACAATGTAAACGTTGGTAT
GACCAAAGAAGACCACCAAACATTTATACAGCTACCACAGCTGAATACCG
GAATGTGAAAAGTCTTGTTTCACAGTTATCTTTATTACCAAAAAATTATA
GAGAATGTGTAAATGACGCTACATTTTTACTGTGTGCACTTTATTCACCA
GTCTGTATTAAAGGAAGTAAACCGTTGAAACCTTGTAGAGAGTTATGCGT
TAAATGGCGAAAGAATTGTCGAAGATTGGATATTTTTAGTAATGTCGCTC
TTCCTGACAAGCTGAGAGATTGTAATGAATTGCCAGAGTTTCATAATTCA
ATGTGTATACAACCAAGCAGTTTCATAACCAAAGAACAAGATGCATATCT
TGCTTCTCTCAATCGTACTGCTGATCCTATCTTTGGATATAAAGGCTGAT
GCATTGGCTAATTATGATGATTTACCACGTCTATCAAAGCAAAGGAACCA
ATGTATCCCAGTTGAAATTCCACAATGTAAACGTTGGTATGACCAAAGAA
GACCACCAAACATTTATACAGCTACCACAGCTGAATACCGGAATGTGAAA
AGTCTTGTTTCACAGTTATCTTTATTACCAAAAAATTATAGAGAATGTGT
AAATGACGCTACATTTTTACTGTGTGCACTTTATTCACCAGTCTGTATTA
AAGGAAGTAAACCGTTGAAACCTTGTAGAGAGTTATGCGTTAAATGGCGA
AAGAATTGTCGAAGATTGGATATTTTTAGTAATGTCGCTCTTCCTGACAA
GCTGAGAGATTGTAATGAATTGCCAGAGTTTCATAATTCAATGTGTATAC
AACCAAGCAGTTTCATAACCAAAGAACAAGAAGAAAAGAAATCGAATAAA
GATTCTTCAAAACACAAAACGTGCGATTGTAAAGACTTCAAGCAACCAAC
GCCTAAATATCGTCATTTTCGGAAAGCAGCCTACGAAGAAAAGAAATCGA
ATAAAGATTCTTCAAAACACAAAACGTGCGATTGTAAAGACTTCAAGCAA
CCAACGCCTAAATATCGTCATTTTCGGAAAGCAGCCTACGTTATTGAAGC
AACAATCAATTCAAGAGAAACATTAGCCAATGGGAACACTAAAATCATAC
TCGACGTTTTAAAAATCTACAAGCAAGTTATTGAAGCAACAATCAATTCA
AGAGAAACATTAGCCAATGGGAACACTAAAATCATACTCGACGTTTTAAA
AATCTACAAGCAAGGTAAAATTTCGATCAAATTCGGTAAACTACGGATGT
GGTCATCTTGTTTGTGTCACAAAGACATCCAATATGGCGATAAGAAGTAT
TTCTTGATTGTTGACGAAAACCAtcacaaaaagaagaaaaatttagaaat
caGTAAGACAACACTCgttcttgatgctacacaatatgaaaataaaattg
acaaatGGTACAAGAAATGTTTGAAGCGTAAAAGTTGCTAAGTAAAATTT
CGATCAAATTCGGTAAACTACGGATGTGGTCATCTTGTTTGTGTCACAAA
GACATCCAATATGGCGATAAGAAGTATTTCTTGATTGTTGACGAAAACCA
tcacaaaaagaagaaaaatttagaaatcaGTAAGACAACACTCgttcttg
atgctacacaatatgaaaataaaattgacaaatGGTACAAGAAATGTTTG
AAGCGTAAAAGTTGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:89467..94798 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 685-909:5108 |
| Aaloc | 598-681:4569 |
| Aaloc | 493-594:3220 |
| Aaloc | 1-489:1 |
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