|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:109105..111895- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037850 ID=XLOC_037850|Name=XLOC_037850|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2791bp|location=Sequence derived from alignment at sc0000001_pilon:109105..111895- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGTTCCTTTCTTCGCGGTTAACCTTCGACAAGTTCGGACATTGTTC
TACCACTCGTATTTTTGAAAGCAAAATGCCCAAAAAGACAAAACTTCAAT
TCAAAACGGATTCAGGTAATAAGCAATTAACTGTTTTGTAATCACAGGGA
AAATATGGTTTTGTTGATTTACAAAAAAACTATTCCTTTACTCTAAGAAA
CTCTGTTGGCCATTATTTGCCCTTTTGCTTTGCTTGAAACCCACGAACTG
AATCAGCATTTTTTATTTATTCTACAGACTCCAACCAAGTCACTAACCAT
TCTACAGACTCCAACCAAGTCACTAACCATTCTACAGACTCAAGACAAGT
TGAACCTGCAAAAATCAACTCTCCTGGAAGTAAGACTTTCTTCTTCATGT
ATTAGATTGAATTTAGGTCAAAGTTTTATAGCTACAGGAAGGGATACGCC
AAAGGTTTTTTTCTGAGAAGAAAAAAGAAGATAAATAGGTCTTAATTAAA
GAAGTACAGGAATTTTTGAGAAATGACATTCTCCAGGGGTAAACTAAGGG
TCTGTTACATGTACCATTCTCCCCGCTGCTATGAAATTTTTTTGCATTAC
ATGCATATTTTATTTCACATCGCTTCAGGCAATTTTCATTTTTGGTGAGA
TTTTCTGTCTGTTGTCGACGGCAAAATGATATTTTGCCCTATTTTGGTTA
GGCGAAGGGTTGGCAGACGATATCATCCACCAGGATGCAAGTGAAATTTT
TCAATCTACGGACCTAGACGGGGGTTCGGTTATTATCAGTTAGGGTTAGG
GTTGGAGCTCGAGAGTCACAATATAAGGCCGAAGGCCTTTTTAGGGGCAT
CCGTACCCTGTGACCTAACTTAGGGATCCTTGTAGGGATCCCCGTAGGGA
TCCTTGTAGGGGCACCGGTAGGGTTGGGAGCTTTCTTAATAAAGGTCTGT
AAATTACACACTAAAAGTATTTGTGAATGACAGCATTTGGCCGTGTCACG
TTGGCGCTAGCGGTTAGGCATTGGGTTTGTAAACCAAGGTTGCTTGTATT
TGGTGGTTCGAGCCGGGGTCGGAGACCTATTTCACCGGTACGGGCAAATT
TCAGAAAAATACTTAGAAAACAATTAGAAACACTAGAGAAAGTCAGAAAA
TCAGGATAGAAGATAGGAAAGTAGAAAATAGGTGGAAAATAAGAGAGGAT
GCATCCTGGTGGATGATATCGTTTGCCAACCTAGGCGAAGAAAGTTGCCA
AAATTAATTTAAATTATTCCAACATACCAAAGTATTCTTCGCCAAAAAAA
TAGCAACTCATGCTTTTGTATTTTTAAATTTCAGGATCTACTGAGGATGA
TAATGAAGCCCCTCCTCCTTCAACTCCTAAAAAACAAAGAATGAGCTTTG
CAGGTAATGACCAATTTTTCTGCTTGAATGGGCTTAAATCACAGGCTTAT
AGATATTACAATGAGATTCTATGCACTTGTTTCTTGGATGATGAATCTCT
TATTGGCCTTGGTTAAATATCATTGCAGCAAAATTACCCGTCGCACGACT
TCTCGTGAAATACTTAAATATTATACTTGTTCTGGATATTATTTACTTGC
GATATTACTTATTTTGCCTTTATAATCAAATCTTGAAACAGCTTTGATTG
TTAGAGGTGCCAAAAGAGAAGTTGTTTTAGTCTCCCCAATTCTAGAAATA
ATACTTTTTGAGCTGGAAATTGGGCTCATCATTTTCCAAATGTGGATATG
TTTAATAGGTGTCCTTTTATCATACTAGATTCTGAAACAAGAGAGGCCCA
TGGCTATGTCATAAGATTGTATGATGTCACAACATCCCCCTCAAAAGTCA
AATATTTCAATGCGGTGATTGATAATGGTATACAAGAATCAAATATAGTG
TGCTACAATCCTGATCTTCATGAAGCCTTTTCATCAGCCAAACTCAAGGA
TTGTCCAATCAAAATTTCTAAATTCACCGTTGAAAATGATCAATACAGAA
ATCAAACTAAATTCAAACTTGGTTCTGCAGGTAATGCTGAGTTTTCGGAC
ATGAACATTCCTTATAACTTAGTTGCAAAAAAATTAGAATGGGTCAATGC
ATTTACTGACTTGATCAATGTTGAGAATATCGCACTTGAGAGTATCATTA
ACGTTGCGTGTCATGTTACTCTTGTTGGAGAAGCCTTTGACGAAGACACA
AAGTTCGGCAGAAAGAAAAAGATGAATGTAAGAATTCATGACAATACCAT
AACAGAAAGTATCCGGCTAGTTCTGTGGGGTAACCATGCACAGAAGATCA
CAGCGAGTGGCTCCTACCGCTTCAAAGAACTCAGAGTAAAAACGTACAAT
GGAAGATATCTGACCACAACGGCCTACACCGAGATAACCCAATCTAATGA
ATCATATGAGGTGAGATTGGATGATAATTACAACTCTCTTAACCAAGAAA
CTATTGTTGCCTTCCCTGCAATAGGAATAAACAAACTGGAAACCAATTAT
TATTGTTCCATCTGCAACCATAAAGTTATCAAGCTTGGCAAGTATGGCAT
GTGTAACAAATGTCCCATGAAAGCACTCCTCGGTGAGAAATTTTTTGATG
TCAAAGTTTCCTTTAAAAATGGTAGTGAAAATGTAATGGTCACATTTCCA
CATAACATTTTCATTCAATTAATTGAAAAGGTCAATGCAGATCATAATGA
TCTAGACGACATTGAGGAAAAACTTCTGGTTACAAAAGACCTTTCTGTTA
AGTACAAACAAATGTCAAGAATTGCTACTGCAATCTTATAA Coding sequence (CDS) from alignment at sc0000001_pilon:109105..111895- >XLOC_037850 ID=XLOC_037850|Name=XLOC_037850|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2598bp|location=Sequence derived from alignment at sc0000001_pilon:109105..111895- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGTTCCTTTCTTCGCGGTTAACCTTCGACAAGTTCGGACATTGTTC
TACCACTCGTATTTTTGAAAGCAAAATGCCCAAAAAGACAAAACTTCAAT
TCAAAACGGATTCAGATGCTGTTCCTTTCTTCGCGGTTAACCTTCGACAA
GTTCGGACATTGTTCTACCACTCGTATTTTTGAAAGCAAAATGCCCAAAA
AGACAAAACTTCAATTCAAAACGGATTCAGACTCCAACCAAGTCACTAAC
CATTCTACAGACTCCAACCAAGTCACTAACCATTCTACAGACTCAAGACA
AGTTGAACCTGCAAAAATCAACTCTCCTGGAAACTCCAACCAAGTCACTA
ACCATTCTACAGACTCCAACCAAGTCACTAACCATTCTACAGACTCAAGA
CAAGTTGAACCTGCAAAAATCAACTCTCCTGGAAGATCTACTGAGGATGA
TAATGAAGCCCCTCCTCCTTCAACTCCTAAAAAACAAAGAATGAGCTTTG
CAGGATCTACTGAGGATGATAATGAAGCCCCTCCTCCTTCAACTCCTAAA
AAACAAAGAATGAGCTTTGCAGATTCTGAAACAAGAGAGGCCCATGGCTA
TGTCATAAGATTGTATGATGTCACAACATCCCCCTCAAAAGTCAAATATT
TCAATGCGGTGATTGATAATGGTATACAAGAATCAAATATAGTGTGCTAC
AATCCTGATCTTCATGAAGCCTTTTCATCAGCCAAACTCAAGGATTGTCC
AATCAAAATTTCTAAATTCACCGTTGAAAATGATCAATACAGAAATCAAA
CTAAATTCAAACTTGGTTCTGCAGGTAATGCTGAGTTTTCGGACATGAAC
ATTCCTTATAACTTAGTTGCAAAAAAATTAGAATGGGTCAATGCATTTAC
TGACTTGATCAATGTTGAGAATATCGCACTTGAGAGTATCATTAACGTTG
CGTGTCATGTTACTCTTGTTGGAGAAGCCTTTGACGAAGACACAAAGTTC
GGCAGAAAGAAAAAGATGAATGTAAGAATTCATGACAATACCATAACAGA
AAGTATCCGGCTAGTTCTGTGGGGTAACCATGCACAGAAGATCACAGCGA
GTGGCTCCTACCGCTTCAAAGAACTCAGAGTAAAAACGTACAATGGAAGA
TATCTGACCACAACGGCCTACACCGAGATAACCCAATCTAATGAATCATA
TGAGGTGAGATTGGATGATAATTACAACTCTCTTAACCAAGAAACTATTG
TTGCCTTCCCTGCAATAGGAATAAACAAACTGGAAACCAATTATTATTGT
TCCATCTGCAACCATAAAGTTATCAAGCTTGGCAAGTATGGCATGTGTAA
CAAATGTCCCATGAAAGCACTCCTCGGTGAGAAATTTTTTGATGTCAAAG
TTTCCTTTAAAAATGGTAGTGAAAATGTAATGGTCACATTTCCACATAAC
ATTTTCATTCAATTAATTGAAAAGGTCAATGCAGATCATAATGATCTAGA
CGACATTGAGGAAAAACTTCTGGTTACAAAAGACCTTTCTGTTAAGTACA
AACAAATGTCAAGAATTGCTACTGCAATCTTATAAATTCTGAAACAAGAG
AGGCCCATGGCTATGTCATAAGATTGTATGATGTCACAACATCCCCCTCA
AAAGTCAAATATTTCAATGCGGTGATTGATAATGGTATACAAGAATCAAA
TATAGTGTGCTACAATCCTGATCTTCATGAAGCCTTTTCATCAGCCAAAC
TCAAGGATTGTCCAATCAAAATTTCTAAATTCACCGTTGAAAATGATCAA
TACAGAAATCAAACTAAATTCAAACTTGGTTCTGCAGGTAATGCTGAGTT
TTCGGACATGAACATTCCTTATAACTTAGTTGCAAAAAAATTAGAATGGG
TCAATGCATTTACTGACTTGATCAATGTTGAGAATATCGCACTTGAGAGT
ATCATTAACGTTGCGTGTCATGTTACTCTTGTTGGAGAAGCCTTTGACGA
AGACACAAAGTTCGGCAGAAAGAAAAAGATGAATGTAAGAATTCATGACA
ATACCATAACAGAAAGTATCCGGCTAGTTCTGTGGGGTAACCATGCACAG
AAGATCACAGCGAGTGGCTCCTACCGCTTCAAAGAACTCAGAGTAAAAAC
GTACAATGGAAGATATCTGACCACAACGGCCTACACCGAGATAACCCAAT
CTAATGAATCATATGAGGTGAGATTGGATGATAATTACAACTCTCTTAAC
CAAGAAACTATTGTTGCCTTCCCTGCAATAGGAATAAACAAACTGGAAAC
CAATTATTATTGTTCCATCTGCAACCATAAAGTTATCAAGCTTGGCAAGT
ATGGCATGTGTAACAAATGTCCCATGAAAGCACTCCTCGGTGAGAAATTT
TTTGATGTCAAAGTTTCCTTTAAAAATGGTAGTGAAAATGTAATGGTCAC
ATTTCCACATAACATTTTCATTCAATTAATTGAAAAGGTCAATGCAGATC
ATAATGATCTAGACGACATTGAGGAAAAACTTCTGGTTACAAAAGACCTT
TCTGTTAAGTACAAACAAATGTCAAGAATTGCTACTGCAATCTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:109105..111895 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 289-1299:1012 |
| Aaloc | 220-285:1456 |
| Aaloc | 118-216:2513 |
| Aaloc | 1-114:2792 |
|
