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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:1194482..1199746- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037821 ID=XLOC_037821|Name=XLOC_037821|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5265bp|location=Sequence derived from alignment at sc0000081_pilon:1194482..1199746- (Clytia hemisphaerica_ch_hm2_pilon)
GTTATTTGGGACATTTTACGATGTTGGGTCAAACTTCACCCGATCAACCG
TAAAAAGATCACGGAACGGGCTCCGGCGCACATCATTCTTGAGAAGGATC
CTGAATTAGAAGCATCCTTCGAAATATTGAAAGAAGCCACTCCCAAATCA
AAGCAAATGAAATTGACACGCTTCCCCATCAACCCTGAAGCAGACTGGGG
ACCAAAAGCAAGGTATGATACTAACGTTTTCTAATAATAGGTGACTTTTT
GACGAGAAGTATTATCAGCGAGTATAAAAAAATTTGCTGGGCTGGGACAA
GCCATCAAGTATTGTTTTAGTGGACTAAATAATGTTTTGCGAATTCGCTA
ATTAAGACTTTTAAAAATAATTCACATAATATTCAATTTCTACTTCTCGA
GTAAAAACTAAAAATATATACTACAGTATGTGGCCCCCAAAACGTCGATC
AAATTTAAAATTTCTTTCAAATCTAGAGGAAAAGAGGTTTTACAAAAATT
TTTGCATCATGAAAAACTTTAACATCTCTACTTTATTTCCCGGAAGTTCT
TTTTCAAAATTTTCAATTTCAACAATATTTTTCAATTGCTTAAAGATAGG
TAGCTTCTTTCTAATAGCCCCCAAAACGGAGGTTTGCAATTTTAGCGATT
TCTCGAGATTTTTTCAAGGTATGAATACAAAATTTAGACCATAGTTTGAA
AATGTGATTTAGAGGTTTTTGGGCATAATTTTGTTTGATATAATTTTTAC
AGTATACCCCTGGTTCTTAAAACGCAGGTTTGGGGCCCCCAAACGTATAG
GTGCAGTTAAAATCAAATTATTAAGCCCAGTAGTAATAGGGGTAGAAACT
ATGAACATATTTGTATTTTCCCTTAAATTTACGAACCGATGGATGTAAAA
TTTATGATTTTTGTAAAATATTTCAAGATTTTCGATGATGCAAAGTCCAA
ACTGAAAATTTAGAAATTTTAGAAATGAAAATTTTGATTTAACAACGTCT
TAATCAAGTTTCTGGAAACCAATCTCTTTTGAAAATGGTTCCTTCATTCA
TGTATGGAATATTCTGGGAAAATTTTAGAAAAAAAGCTTAACTGAAACTG
AAAATATCAAGCTTTAAAGGTATTTTTCTCCTATATTTTACGAAAAAATG
ACAGAATTTTCCGTTTTTATATTTATGTTATTTTGAGCCTGTCTCAAACC
ACCAAAAACATGCTCATTTTTAAGTATAACCATCATTCTTTCAAAATAAA
CAAAAATCGTCTAATTCTGATAAATCGTCAAGTCAGAATCATCCTTTTAA
TGCCGACCTCCGTTTTGGGGGGGCTGTCTCCGTTTTGGGGCCATATACTG
TACTATCCGTTTAGTTTCATTTTTTCTTGATTGCCTGAAACTCACCCGTG
CATATATAGTTTCTTCTCATAAATTGAAACTCGCCCGAGACTTTGGTGCA
TATGGTATAGTTCTTCTCATAAGTTATGTCGGAGACAAACTTGCCTCGTT
TTAGAAATGATGCTATACCATCGATAGATTACGTTTAATTATCGTTACTT
AATGAGGCAAGTGTTGTTCTCCAAATATTTTTATTAGTGAGTAGGCTTAT
AAGAAATTGTATCTAGTGCAATTGCCAATCATTCTTTATGGATCACGAAT
CATCATTTCTGTACTCTTCAAAATCTGGTTTTGCTTCCACCGTGAATATC
GTATGCCACTTTTGTCGCCTCTGTTTAAGTTGGATGCGTTTACCCATAGG
GCGTTCGGTGTGAAGCTTCCGCAGTTTCCGTACCAGAAGCCACCACGGTT
GAGCTCTTCGGCACAGTTAATGTACGAGGACACGTCATTGTCAAACCCTA
ATGTTGTGAACTCTCTGCCTTTTGCATCATTCAATATATCACTACCACCA
GTGATACGGCTTTTAGCTCTCAGCGTGTAATTTGCTGACTCACTCTCGAT
GTGAAATTTTGCATAAATCCATTCTTTGACATCTCCATCAAATGATTTCA
AGATGATTTTAATCTTTTGTTGTGTTTTGATACTGATCTTGTGCACTATT
TCGTTGCCCAACCAGTAACTTCCTAATGAAAACGGATTTTAAAAAACAAT
TCTGCAAACGCGGAACACAATAAATATTTTCCCAAAGAAATTACAACTTG
ACCCTTCTTGAAAATTAGAAAACACTTCATGGATATATTTTATCTAAAAG
TTCAAAACTTATTTTTGGGTTTCTCGGTTTTCCCCTGAAGTCAAAGCTCT
GAAATAAACTAATAAATTATTACCTTGAGGGTCACCAAATCCGTGTTTAT
AAGATTGCCAGCCAACCTGGAAGTTCGTCTTTGCATCCAAATTCCTTTGA
AAGACCAACCAGGCTCCGTCTGAATCAAAATGGCAACGCACCATTCGTTG
CTCATCTCCCAACAGATTGATCTCATACGCGCCTGTACTTGTTATGCCCG
TATCAGCCAGGTCTTGGCAGCTTCGTATCTCGGAATAAACATTGGAGTTT
GTATCGTCTGCTAGATTCGCTTGTCGAGCAAATCGATTGAAAAAGTTGCA
ATGATGAAGTGTTGTTTGTACAATTGCCAATGAGTAACATTGCTTCTCGT
AATGACATTTTGAAAAGCATTGTTGGAGTTTTGGTGTCCGTAGAGAGCTG
TAGGAGTGTTGTCTGTTTATACTTACCGACGAGCACCAGATTCTTAGCAG
ATGCAATTTCTACACCAACGTTTTTGATGATTAAAAAGAGTACACAAACT
TTGAACATTTTTGTTCGAAGACAGGTTCGTTTTCTTTTTTCGTTTTCTGA
TACGATTCTCGCCCAATCTTGTTTTCAAAGATGTCGTTTTGATACAACAG
TGATATTAAAATTATTATTTTTTTATTAATTACGAAATTGGAAATTTAAG
CGGTGAAAATAATTATTAAAACGTTTATCACCCCTTACTGATATCTCATT
CAAAACGAAAAATGATACAAATTTGAATTGGTGAGGTGAAAAGGGGGGAA
TTCATAAACAAAAGAACGGCTGAAGTTGAATCGTCTCAATTTTTTTGGAC
AAAAAGAAGATAAGAGATGATTGATTTTATGGACCTGGACAATGCCAAGT
TTAGTCAAATCAAACGACAATTGATTAATAACTATAAAAAAATAAAAAAG
TATATTACATGTCGTCTACTCAAACATACAAAAAGTTAAATTCAAAGTTC
CAAAACCTGTGAAATCTGTTGCGTTTTAGACAAAATTTGACATCAATCGT
ACTCTAACTGACAGAATTTTGAACTTTAAAAGCCTGTATTCTTTATATGT
TTGGATACAAGACTTGTAGTAGTATATATTTTTTCTCAGATTTTCATGCT
CTATCCGATGTTAATCATTGTTCATTTGAAAAATCGTCAACTTTTTACTC
ATTTTGGGACTTATGAGTTTTGCCTACGGCGTCAGTTTTTTTTTTTTCCT
AGCCTAATTTGTGGGCCCCCTCTCAAAAAATCCTATCTACTTTCGATACG
AACCAATCACATGCAGTTGAGTCCCACGAAAGATGCTACGGGTCTTAAGG
GTTGGCGTCTATAGGAAGCATAATAAACAGCTGTTTGTTTCTGGGGTATA
AGTTCTTTTGTGGCACACTATTTTCCAGCAAACTGTCGAGTTTCGATTCT
TCCTCTATGGATTTATATTGAAATTCGATGGTTATTTCATTTTGAAATAT
TATGATACTTCTCTGTTTTTCTTTCTGTCTGTCCGTCCGTCCGTCCGTCA
ATTCGTTCGTCTGTTACCAGATTTTCTCGGGTTTGGACCTACCTTCAGGG
GGTCCTATAAATTAACTTGTGTATGTCCCGTTTCAACCTCGTTTCCTGCG
TATTATCAGCTATTTGATACTTACTGATAGCGCTAAATAATACCCTGGCA
TTGTCTGCTATTCGAACGCGTAAAATTATACGCAATTCAAAAACAAAACG
TCAGATTTTATTTGTTCCTGGGTTCGAAACCATTGCATTGCAGTGCAACT
TTGTAACGTCAGATTTTTTTTCGGAGAGTTGTTTTTTCGCCGTAAAAATC
GGTTTTTCTTATTTAGGGAAATTCCCTTTTACCTCTCGCGATTGGCTTGG
TATGATTTTTTATACAATGATGTAAAATGATGTCTTCAATCTGATTGATC
TGCAAATGGAGTCCAATTTTCGAAAAAATAATTTTTTGGGCAAATTTGGG
CCAAACAATGCCTAAAATTAAGGTTTTTTGTACTTTGTGTGAAATGAAAA
TTTGGCTGAAAGATAGAGGACAAGGTTTTCTAAAATGTTGCTGAAGCCGT
TTTTTCAGAAAGTTGTTTTTCGCCGTAAAAATCAGACTTTCTTATTTGGG
GAAATTCCCTTCTGTCATTTTTAGGGAATATAAGCATTTCTCGCGATTGG
CTTGGTATTTTTTCTGACTTTCTAATTTATATTTTTTATTACTGTTGCTA
TGTTTTGTATGTTCTATCTTTATTTTCTATACACGCTTTTTTTAATAAGA
ATATCTTCTACAAGAATATCAGGGTGAAAATTGGCCAAATTGTAAGAATA
ACCTAAGAATACCCTCTAGGGTGAGTTTCACAGAATTTGATAAGAATACA
GTCATTTTTTATTTGGGTTAACAGAAAAAAACTGCTTCCTTTGTTTGAAC
TTTGAGGCAGAAATGTAATTTTAGTTCTAAATGTTCATTCAAAAGTCCAA
AACTCTCAAATTGATCATTGATCATGTTTGTAAAAAAGTCAAGTCTAAAA
AAGTAAGAATACGTTAAGAATATTTCACCCTCAATTTTGGCAATTTCTTA
AGAATACTTTCAAGACCCTCGTGCAAAGTAGACAATATTCTTATAAAAAG
AAAAGCGTGTATTGTCTATCAGACAGGCCCATTCAACATGGAGCTTGTTC
TTCATGGTTTGATGATGTTTTCAAGTGCTGACCGATCTAAACTTCTTTAA
ACAAGAAGTATGATCGATCTCGCCTCATATTCAAACTATTCTTGTTACAG
GGCAAAGCAGTCGACCCAGTTTTCGAGTTTAGCGGAAAAACGTCATGCTC
TCCAAGGGAAACGAACGCTGAAGAAAACTGATCCTGATTTTCATAAACAA
TTTCCATGTAAAAGGTTTAAACGTGGTGAGTGTGAACTAGGAACCACGTG
CAAGTATAATCACCCGGTAACGAAAGATGGTGTAGGGGAAACTCGTGAAA
AGGACAGTAAGGGGGAAAACCCCTTAAACGAGACAGAGGAAACCCCTCTT
GCGATGGAGTCTTGA Coding sequence (CDS) from alignment at sc0000081_pilon:1194482..1199746- >XLOC_037821 ID=XLOC_037821|Name=XLOC_037821|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=954bp|location=Sequence derived from alignment at sc0000081_pilon:1194482..1199746- (Clytia hemisphaerica_ch_hm2_pilon)
GTTATTTGGGACATTTTACGATGTTGGGTCAAACTTCACCCGATCAACCG
TAAAAAGATCACGGAACGGGCTCCGGCGCACATCATTCTTGAGAAGGATC
CTGAATTAGAAGCATCCTTCGAAATATTGAAAGAAGCCACTCCCAAATCA
AAGCAAATGAAATTGACACGCTTCCCCATCAACCCTGAAGCAGACTGGGG
ACCAAAAGCAAGGTTATTTGGGACATTTTACGATGTTGGGTCAAACTTCA
CCCGATCAACCGTAAAAAGATCACGGAACGGGCTCCGGCGCACATCATTC
TTGAGAAGGATCCTGAATTAGAAGCATCCTTCGAAATATTGAAAGAAGCC
ACTCCCAAATCAAAGCAAATGAAATTGACACGCTTCCCCATCAACCCTGA
AGCAGACTGGGGACCAAAAGCAAGGGCAAAGCAGTCGACCCAGTTTTCGA
GTTTAGCGGAAAAACGTCATGCTCTCCAAGGGAAACGAACGCTGAAGAAA
ACTGATCCTGATTTTCATAAACAATTTCCATGTAAAAGGTTTAAACGTGG
TGAGTGTGAACTAGGAACCACGTGCAAGTATAATCACCCGGTAACGAAAG
ATGGTGTAGGGGAAACTCGTGAAAAGGACAGTAAGGGGGAAAACCCCTTA
AACGAGACAGAGGAAACCCCTCTTGCGATGGAGTCTTGAGGCAAAGCAGT
CGACCCAGTTTTCGAGTTTAGCGGAAAAACGTCATGCTCTCCAAGGGAAA
CGAACGCTGAAGAAAACTGATCCTGATTTTCATAAACAATTTCCATGTAA
AAGGTTTAAACGTGGTGAGTGTGAACTAGGAACCACGTGCAAGTATAATC
ACCCGGTAACGAAAGATGGTGTAGGGGAAACTCGTGAAAAGGACAGTAAG
GGGGAAAACCCCTTAAACGAGACAGAGGAAACCCCTCTTGCGATGGAGTC
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:1194482..1199746 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 214-477:265 |
| Aaloc | 1-210:5266 |
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