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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000140_pilon:77593..80947+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037778 ID=XLOC_037778|Name=XLOC_037778|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3355bp|location=Sequence derived from alignment at sc0000140_pilon:77593..80947+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACTCAGTCGAAGTGAAGAAAATTGGTCAGTCTTGATAAATGAGGT
ATGTTCTGTTTCTTATCTTTATTGAGTCTCAACTCAGTAGTCCTCAATTT
ACAAGTGGGTCACACATTTTGTTAAGAACaacacattttttaaaataCTA
ATCAAATACTTAACCCTGTAATTGTTGATGTCGGCATATGCtgacatctg
gcaaataggtcacACCTTCATTTTTTACGCACCGCAGTAGGGTTTATTGG
GATTAATTtttgcagggattaaattttgggCTTGAGCTAGTCCAcgaaat
ttcgcggggacttaattttgcagatgactctattgtgagataattatttt
cacaattttgtgccatttttttgctattttactgCTAAGCTCTGCATGCT
GGTTGTAAAATACACATTCTTAGCGCATATTTAATGGCGGTAAACATGTT
GAAAGTggtcttttgacattttttggaaCTTAAAGCAAAAGAATTGCGTC
GATTAgaccttttcaaatttccattgggacttatttTTGCGAATGACAAA
TTCacaaaatccgcaaaattaatcccattaaattAAAGTAACTTAATCTA
CCCATAGAATATTATTTAAGGTTAGCCCTCTGATTTGTTGTTGTTAAATA
TATTATGACAAATTCTATTCATCTGACATTATGATTTTATTACCTGTAAA
TTCCATGAAGCTTCTAAAGGTGTTGTTGTTACTGTGTAATTCTCAACttt
agttgagctagaatctgagaatgtctgtgtgtgtgtctgtgtgtcacaaa
aactttggggcaggctggagacttccaaaatggtccgatttggctgaaat
tttgcacacttgatccttgggcaaatccctgggggtgctttttcattttt
tcaaaattttgatttttggggcctggggacgagttatTCGCCAAAACGat
gctaaaactttggggcaggctggagacttcaaaaatgatccgaatgggat
gaaattttgcacacttgatccttgggcaaatccctgggggtgtttttttc
attttttcaaaattttgatttttggggcctggggacgagtttttcgccaa
aacgaggctaaaacccaaaatgctataatttttcttaagccattaagttt
acaattgggcctacgaatgatttcaaagatactgaagttgagccactgcg
gttagcacgttcgacagtattATATAGTATTATGtattaatatataaaat
ttgatgGTAAATATAGTTCCTTTTTCTTGTTGTTGCcgcaaaataattta
aaatgaagaaatttttgtcTTGGAcgcttttctgaaaattgaaaatcttt
ttatagTTCAACATTTGTAAACAGAAGCTACAAAGCAAACGAGAAAGCTT
GAAAATCATGATGAAAGAATTGGATCAAGCACAAATTGAAAAAGATGTCT
ACAAAAACAAAGCTCGCCAGCtagtaaatatctttttttataatataatt
ttacaaaatatccatacttcaaattttagaaaaagaaaaattacctcAGA
TCACAAAGTGCTAAAACTTttgagcttggtgcaggtaaatCAGTCTAATA
TAATACAGAATGTTAGATATGTCTGTGTGTGAatccttgttgacagactt
taaacccaggcagacacgcataattaaaaaaaaaggccTTATTTAGTGAT
ACGCCAAAAACAGACCAATCAGGTTGAACCTGCattacaaggaaaaaatc
ttccTGTAAGTTACCTGCACCAAGAGGTTAACCAATAACATACAAACATA
CAGAACTACATCACATAGTTTCCTGGGTGGTTTAAAACCCCCCTAGATTT
AATCAAACCAAACCCCCCTATATATAAATTTCTCAGACAATTTAGTGGGG
AGGAAACTATGCACCGTCAACACGTTTACcacttggattcccaggctagg
ttTGAATTGACTAAAGTCTAAGTTTTTCACTTCCGTTATGTCCTTTTAGC
AACGTGATTTTGAAGAGTTGAAGACAGCAGTTGGTGAAAGTTGGAATAAC
AACGAACATGCActgaaatttggtgaaaatgaaaagaaagtcaACGTGAG
CTTATCACATACCATGATTGATCTGTTTAAAATAATCATAGTCCTtgtaa
aaaacactggtctggaagcttattgttttaacttttttttagcCTTTCCT
TTGTTAtaatcaaaagatgaaaatcgacTTGCatagtttttgatcacgtt
accaagtagtactcctcttgggattggtttaagatttaatcacatgatca
aaaagtgagcaaaacaaactaacttcTCAACACAAGTTCAAGTAATAAAC
AATGgacaaaaacaaaatgcttccagaccggggttttttatacggactat
gaaaTGATTGAATAAGATAAGTTATAGATCCAAAGAGAAATAATTGCTTA
GATTCTAGGTGTTTgcttaaaagaattacaataAAGAAGGACTCTAGTCT
ACATTACTAAACTCAATGTTGTCAGAcattattttaataaaagattGGGC
aaaaaaaTAGCTCTTAACACTAACAATTAGGAAAAATTGTAACCCTTTtc
tcaatcttttttttccaGACTTTGACCAATTTATTACAATATTCAAAAGA
CGAGAACGGGAGGTTGAAAACAGATCTGGAGAATATTCGCCAATTGTATA
ACGATACCCAGAAAGACAACATTTTGCTAAGAAACAGTCTCACAAGACAA
GAAGAGACGAAGAAAGTCAATGAAAATGGAGTCAACGATAAAGAGAAACT
AATTATACAACTGGAAGAATCTTTGGCAAAGGTAAGTGAGAGTATCTTAG
AAAGAAGTTATtttaccgttggaaagataattatcCAGTATtgctaaata
aaaaattgattgggaagaatttttgaaattgaaaaatgaaagaatttgtt
CACGTGTTTTACAACTCTTTCTAAATGAAAACAATTCAATGAAGTTATGA
ATTTAAACCATTGCAGATAGATCAAGAGTATCGGGTCATTCgtttagtgt
tttttatctGTTGTCCATTTGGCAACGAATTcagacgagatggagttttt
ataagacactttaataattggtcattaagaataataaaaatgacgcgttc
tttagaaaaagtaacaaaattgttttattactggttaacgactaACCAAA
TCAagtaagagcttgtaaaaactcaaaaataaaaataaattaaaaataat
gttatttttaatgaaaaaatcgtttctttttaTTCTCAGCTGCATGATTT
GGAAGATGAAGTAGAAGTATTACGAGAAGAAAACAAACAGATTGAGGACG
AGGTA Coding sequence (CDS) from alignment at sc0000140_pilon:77593..80947+ >XLOC_037778 ID=XLOC_037778|Name=XLOC_037778|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1080bp|location=Sequence derived from alignment at sc0000140_pilon:77593..80947+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACTCAGTCGAAGTGAAGAAAATTGGTCAGTCTTGATAAATGAGAT
GGCACTCAGTCGAAGTGAAGAAAATTGGTCAGTCTTGATAAATGAGTTCA
ACATTTGTAAACAGAAGCTACAAAGCAAACGAGAAAGCTTGAAAATCATG
ATGAAAGAATTGGATCAAGCACAAATTGAAAAAGATGTCTACAAAAACAA
AGCTCGCCAGCtaTTCAACATTTGTAAACAGAAGCTACAAAGCAAACGAG
AAAGCTTGAAAATCATGATGAAAGAATTGGATCAAGCACAAATTGAAAAA
GATGTCTACAAAAACAAAGCTCGCCAGCtaCAACGTGATTTTGAAGAGTT
GAAGACAGCAGTTGGTGAAAGTTGGAATAACAACGAACATGCActgaaat
ttggtgaaaatgaaaagaaagtcaACCAACGTGATTTTGAAGAGTTGAAG
ACAGCAGTTGGTGAAAGTTGGAATAACAACGAACATGCActgaaatttgg
tgaaaatgaaaagaaagtcaACACTTTGACCAATTTATTACAATATTCAA
AAGACGAGAACGGGAGGTTGAAAACAGATCTGGAGAATATTCGCCAATTG
TATAACGATACCCAGAAAGACAACATTTTGCTAAGAAACAGTCTCACAAG
ACAAGAAGAGACGAAGAAAGTCAATGAAAATGGAGTCAACGATAAAGAGA
AACTAATTATACAACTGGAAGAATCTTTGGCAAAGACTTTGACCAATTTA
TTACAATATTCAAAAGACGAGAACGGGAGGTTGAAAACAGATCTGGAGAA
TATTCGCCAATTGTATAACGATACCCAGAAAGACAACATTTTGCTAAGAA
ACAGTCTCACAAGACAAGAAGAGACGAAGAAAGTCAATGAAAATGGAGTC
AACGATAAAGAGAAACTAATTATACAACTGGAAGAATCTTTGGCAAAGCT
GCATGATTTGGAAGATGAAGTAGAAGTATTACGAGAAGAAAACAAACAGA
TTGAGGACGAGGTACTGCATGATTTGGAAGATGAAGTAGAAGTATTACGA
GAAGAAAACAAACAGATTGAGGACGAGGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000140_pilon | genome | sc0000140_pilon:77593..80947 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 475-540:3290 |
| Aaloc | 262-474:2619 |
| Aaloc | 166-261:2000 |
| Aaloc | 49-165:1357 |
| Aaloc | 1-48:1 |
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