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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:419597..426066+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037776 ID=XLOC_037776|Name=XLOC_037776|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6470bp|location=Sequence derived from alignment at sc0000081_pilon:419597..426066+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTTTTCAAATGCGCAAGCAAACATGGAATCACGAATTGCAGGATT
CGAAAAGAAGGAGAAACAATGCATCGCCAGAAAAGAGAAAGCCGTGGAAA
GAATTAACACAGCACGAGAAAAGCTCAGATTCATGAAAGAAGTTCGGGCT
GAAAGGGTAATTTTCATTACTTTCCCCttttttttGCAGTATAGTCGATT
GGAATTCTTTTTACTCAGTGGAGGTAGGTGATGCTTGTTGCTAGGGCGTT
TTCCTATCAAGAGTAATTTCAAGGCTAGATTATCTAGTCTGGACAGGGTC
CTATTTGGTGTTTTATACAGAGATGCCATTACCTTAGGTTTTATTCTTTC
GGTTTTCAACATAGAATGTACAAGTTTGTACGAATTTTCACCTTGACGAT
TAAAACATGGATAACCTGAAAAGACCCAATAATTGcacaatttctatcat
tttcaaAGGACCCGCTGCATCCAACTCTTTTTGAACTTGTCATCAATGTG
GGTCGTTCTATGAAATACTGTTATTTCTTTGTAAacatattatttttcat
ttcttcaaaGGGCAGTTTCCGACCGGGAGATTTTCTGTCTCTTTTAAACC
AGAACTAGTCCCTGGGGGTGTTAGATAAGCAGACAGCATGCGTGCACAAG
ACTCATTTCTTCCAGAACCTTACCATGGAatctttttgaccaatcaaaaA
CCAGGCTAGTGTCAATATAGTCAATAAGCCGATTTACCAAACTTCTGAAT
ATTAATTGCCTGTAATTTCCACTCGCTAACATCTAATAGAACACATATTT
ATTTCTACAGCAAGACGCACTGGAACGTAAAGAATATAAACTAGGCCAGT
TAGAACAACGTTTAAAGACTGTTGAATATCGTATGGATGCAATCAAACAA
AGCATGAGGTCAAGGAACAATGCTAACGGAGATATCGGCAGAGAAGAACA
AAAGTTGAATGACACGTTaaaaaaaCAATCGGAGTTGCAAGCAAACATGA
TCAGGAATATGAGACGAAGAGATACGATTGAGAAACAGATTCTCGCCTTC
CAAGAGAAAGAATCGAAGTAAGGCTACTTTCGATTTCCACACCAACCTCA
TACCAATGCTGTGCTTTAACACTTCGTTAGGTCAAATTGCCGGTAATACT
TCAAATAGGCATAACTTATGATGCAATAAGCTTTTATGCAGTAACCGTTG
CTTACACAAACCTACATAAAACTCTGCCCTAATTTGAGGATTTTGAAGCA
GAACCCATTGACCACAGGAGCCTTTaatctgaaagaaaattttttcaagg
aaaatccaCAATTTGCTATTTTCATCTGATCGAAGAGACGGAGTGTCCTT
GGACTAAAACTAAATTTAATACCTACCATGCTATCATTCTATTTTCTGGC
CTGTTTCTTATCTTGCGTTTTATGTTCCATTTTTAGGTACCGTGAAAAGA
TGAAAGAGCTAAAAGATAAACTTTCCTACCGAATTGCAAGAGGTGATGAA
TGCAAAAAATCGATTCTAGAGAAAGTGGACAATATCAAGAAAATGCATGC
TGCAATGCTTCAGATGGAACCAAAACTACGTGAAATGGTAACTCGAATGC
GATGTGCAGAAGTTACCGTCCTTGAGCTTGAAAAGAAGATCACAAGTAAA
GAGAATGAAATCAGGTAATGGCTAGCCCCTCGTTTCTTTCTGTTAGTGTT
GAAATTTCTGGTAGAAAttaaatacacccccttctcacagacccgcggga
tttttttcagccagtgatAGGATAGaaatactcttgtctcccgaatagac
ggggggtccgaataagcagggggtaggaaaattttctaaattctaataag
cggggggatggaataagagggggtaGTTTGAAGAAAGATTATTTTCTaac
tggtatcaatttcaacaagaaaaaagaaactttaataaataaacacgtaa
aataagaaccaatactaacaaaaaggaaaactttaacaagtttaaggtct
atctacactgtaataaaatattgaattattcgaatttaattagcgggggg
gtcttaataagagcggggggatggatttttttgtctcttaacaattagcg
ggggggacgtctattcgggagacaagagtagaggaccaaaactcgatggg
gattgatattcccatgttttcttatggctggggatttaaattctattGCT
TTCGAGCCAGAAAACTCAGTGAAGACggaaaaaataatacaataatttGC
AGTGTGGATTAGCTTATCTGAATATTTTCAGTGGGGGACAAATATTagtg
tataattttccactggggacgatattttggccaatttctccAGTGGGAAG
GGCCGGGAAggggtctgtaagaaggggaTGTTTATATTGATGCTTCGTTT
GAATCTGCGAATGATTTTCTAAGTTCTATTACTTGTACAAATGTTTGTGA
CCTGAAACGAGCAAGCATTTTTCGCGAAGTTTGGCCTTTTTCACGAGCCT
TTATATactttttgcccccgcaggagcgtagcgacgaggaggcactcata
gtttcacgcatagatattggactgaaCTCTCGAAAATTGTTGTcttgtcg
cgcaagcatccccgtagttagtctcttccgtaaatgttcggtttttttcc
gggacggtagtatacatattttcatattacgttatatggtattatcatta
ttacatattacaattttagttttgatttagctttgaaaagctgaagcgag
tgttataaatgcaaatcaaaacagtgtatgatataacacgaattacaata
ttacttgtgcaaatcaaaacaaacaaaatggcagactggttatgatgatg
atgagctgattcattgactagaaaaagtgttttgtatgtcaaattttgtt
tcttgtctttgaaactgaatactaactactgtaatttagtcagaagttca
cttcagcaatgatttcgatagatcttttttcaaagaggccaccctgttga
ataattatgtagtccagcagaaaaacaatgataaaaccatgcataattat
tacaatatgcatgatacattAATTacgcatggctctatcattgtttttat
ggctagAGTAcctaattattcaacaggacgtcctctttgaaaaaaggtct
attctttttccggaatctttaatgaaatttgcttaagttttcaaatgtat
atttgatatttttgttcaaaccaGTTCAAactctaaagtctattcacgat
aagtgtgcactcttttttcatttacccataacttttgaaggaattcttca
atctttataaatttggtatcattggaaagatattagtgagtggatcaatt
tgaaataaaaaaatctttaaacaaattctaaaaatgaagatgaaaatgaa
gaagaaaaaaatgaagatcttgtagaaaggtgctataactatcattttca
ctgaagtgaatccttggttatcgaacatcatcactgtgaagaaatttctc
aaaaataatcattgaatcaaaagatatcaagcaaagttataagctgattg
acgtctaaaaacgctgttttctgctgttttctgctgttttttggggtcac
tcacttattaactttgtatcataactttatattgaataaatattttagtg
aaatttcttcacagtgatgatttcctaagatcaaagaatctctccagtga
aaatgaaagttatagcacttctctacaagatcttcatttttttcttcttc
attttcaccttcgtttttagaactttttcaaagacttttttatttcaaat
tgttccactcaaaaatatctctccaacgataccaaatttataaagattga
agaattccttcaaaagttataggtaaaagaaaaaagagtgcacacttatc
gtgaacagactttaatttatttttgtctgtcattttattgataactacct
ttattgtttatagggcttcttgagctttaaataccatcacatggtcgtaa
ctcgagaaagtccttctgaacttagtaaaacaaccggcaaagtacaaaaa
agttgaatgtgcgcatatgtaaagttgaatctaaacgtggttgacttttt
cttttgttcttcaaaataatttacctcacttagagtgtttttacgtcttt
tcagtgcggtaaatctttttcaaaaacctgaaaaaagtttgattacctta
aaggaagaaattttggcgggaatttaatttggtggatggccaaaaaagtt
ttttcagagggaatttaatttggcggatggacgaaaaagctaaatttggc
gggtatttaatttggcggtcgcttaaaaatctaaccttaagatggcgtaa
aaacagcgaaaaaatagcgaaaacaccttaaaagagatcatattttcaaa
atgtttaatttggcgggaatttaatttggcggatggcggaaaaaagaaat
tttggcgggaacttaatttggcggatttcagtcaaatccgccaaatccgc
caaattttctttccgccaaaatttcttcctttaaggtacttgttaaactt
tacatgcgcacgtttaactttttcatgcaattgtgatagcctaaataact
ttcgctccagtggtttggtgaaatagctccaaattctggctttctaagtt
aggagagacattcccgaaggcatttaacggtggttagactaggtacacag
acagtcatacagaaacaccataaagggaaagtatatcgctagctataaac
tcaaaaagtctagcttcctgaaggcacgtctcttcattgtctgcgctgcg
atcagcttgcatcatgaaaaagtactatgcacttgaaaagaaatttaggc
gcattttaacttttctcgactgtacgtctgaatgaaccacaatggcattc
ctttacttttcttttgaccaacaacatagaagattttgcttgagaagtgc
aatcacagcgtacgctagtggagccttaacccgggccttaactaggataa
gtgagtttctatttcacccaacttaagatggcgcagaactttttgataaa
ttttatatgcagtatcctcttgactattgtttattaggcaaagtagcaat
agagaaatgttgaaatatagcagccaatgaaaaaaaacagctatttctga
ttggttaccttgtggatttattcactgcgtatgtccatatattttgccta
caatctaagatgtctgcgacattattagaaaaggtctatttagtgaataa
taatcatgacatatatcgctataagaaagaaactaggagaaaaaacaaac
aaacaggagatgtgaaaatcagtaagataatgatagcataactttttaaa
tatatttttgagaggcttttccagcttttcattaaattttattaagttat
caagctgcatgaattcctcaagtatgtatttttttataatggaatataat
tttttttttcaagcaaacgcctcaatcaatcaataaatcaatctatcaat
caataaatcaaccaatcaaccaatcaatcaataattaaatcaatcaatta
ttcctgattattttttaatgtttaatctttaaagcattaaagctgtataa
gtgcatgacatgatctttatgtgggggcatttagtgaaagctatgactag
tttaatAATAATGAGGCAattcaaaaaactgaaaaattctagagattttt
taaattctagtgaatctaatttttgaatttagaatAGTTCTATAATTTCT
TAACCattcttacacccctgtctcgcagccccggtggaacttcttcccaa
agtggagatcaaaatttattatttattacaaattctattgttccttgttc
aaaaaatccagtgggaaggttttggattttttttctattgaattttaaat
ggggatgaaaacaaagtcaattttcccaGCGGGACAAAAATGAAGGGTAC
ATTTCCGACAGGGTGTTCACTGGTTAGGAGTGTAGTCttcttgtgaaaat
ttaattgtTCCCTTGGCAATAGCACGCTGCTGTGCAGACGTCATAAttga
attattacttttaacatttgatCGAAATTCAATCCCTATGGCTTCGCTAT
ACAAATGTCCttgttattacttttttattgtcaataagtgtaattgactt
gcaaaagcaattaatgcaaaggatgatgAGATTAAAACTCGAACAAACAa
taattttgatgtctatttttagAatcaCtACGGTATGCTATTGAAATCTT
GTATCTTGTATGTAAGTTAATTTGCGCTTAGGTCGATGCTTAGGTAAATC
AACCCTCATGGAGAGAAGATTTAATGTTTGATAATTGTCTATTTTTTAGA
GCCAAACATAAAGACTGTCTTATTGCATGTGATCAAATCGAAATGAATGA
AGTCAAATTCGAAAGACAACGTGAAAGAAAATACAAAGGGCCTGAAGCTT
TGAGATACCTTCAAGAGTAA Coding sequence (CDS) from alignment at sc0000081_pilon:419597..426066+ >XLOC_037776 ID=XLOC_037776|Name=XLOC_037776|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1524bp|location=Sequence derived from alignment at sc0000081_pilon:419597..426066+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTTTTCAAATGCGCAAGCAAACATGGAATCACGAATTGCAGGATT
CGAAAAGAAGGAGAAACAATGCATCGCCAGAAAAGAGAAAGCCGTGGAAA
GAATTAACACAGCACGAGAAAAGCTCAGATTCATGAAAGAAGTTCGGGCT
GAAAGGATGAGTTTTTCAAATGCGCAAGCAAACATGGAATCACGAATTGC
AGGATTCGAAAAGAAGGAGAAACAATGCATCGCCAGAAAAGAGAAAGCCG
TGGAAAGAATTAACACAGCACGAGAAAAGCTCAGATTCATGAAAGAAGTT
CGGGCTGAAAGGCAAGACGCACTGGAACGTAAAGAATATAAACTAGGCCA
GTTAGAACAACGTTTAAAGACTGTTGAATATCGTATGGATGCAATCAAAC
AAAGCATGAGGTCAAGGAACAATGCTAACGGAGATATCGGCAGAGAAGAA
CAAAAGTTGAATGACACGTTaaaaaaaCAATCGGAGTTGCAAGCAAACAT
GATCAGGAATATGAGACGAAGAGATACGATTGAGAAACAGATTCTCGCCT
TCCAAGAGAAAGAATCGAACAAGACGCACTGGAACGTAAAGAATATAAAC
TAGGCCAGTTAGAACAACGTTTAAAGACTGTTGAATATCGTATGGATGCA
ATCAAACAAAGCATGAGGTCAAGGAACAATGCTAACGGAGATATCGGCAG
AGAAGAACAAAAGTTGAATGACACGTTaaaaaaaCAATCGGAGTTGCAAG
CAAACATGATCAGGAATATGAGACGAAGAGATACGATTGAGAAACAGATT
CTCGCCTTCCAAGAGAAAGAATCGAAGTACCGTGAAAAGATGAAAGAGCT
AAAAGATAAACTTTCCTACCGAATTGCAAGAGGTGATGAATGCAAAAAAT
CGATTCTAGAGAAAGTGGACAATATCAAGAAAATGCATGCTGCAATGCTT
CAGATGGAACCAAAACTACGTGAAATGGTAACTCGAATGCGATGTGCAGA
AGTTACCGTCCTTGAGCTTGAAAAGAAGATCACAAGTAAAGAGAATGAAA
TCAGGTACCGTGAAAAGATGAAAGAGCTAAAAGATAAACTTTCCTACCGA
ATTGCAAGAGGTGATGAATGCAAAAAATCGATTCTAGAGAAAGTGGACAA
TATCAAGAAAATGCATGCTGCAATGCTTCAGATGGAACCAAAACTACGTG
AAATGGTAACTCGAATGCGATGTGCAGAAGTTACCGTCCTTGAGCTTGAA
AAGAAGATCACAAGTAAAGAGAATGAAATCAGAGCCAAACATAAAGACTG
TCTTATTGCATGTGATCAAATCGAAATGAATGAAGTCAAATTCGAAAGAC
AACGTGAAAGAAAATACAAAGGGCCTGAAGCTTTGAGATACCTTCAAGAG
TAAAGCCAAACATAAAGACTGTCTTATTGCATGTGATCAAATCGAAATGA
ATGAAGTCAAATTCGAAAGACAACGTGAAAGAAAATACAAAGGGCCTGAA
GCTTTGAGATACCTTCAAGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:419597..426066 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 643-762:6351 |
| Aaloc | 415-639:1438 |
| Aaloc | 157-411:811 |
| Aaloc | 1-156:1 |
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