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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:449843..453742- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037762 ID=XLOC_037762|Name=XLOC_037762|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3900bp|location=Sequence derived from alignment at sc0000081_pilon:449843..453742- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAGAAACATCACAAATCCTGAAGACGCATGTCGTTTTATGCTTTC
TTTGAGTCACGTGACAACCAGTCATGGCAAATTGGAACTTTCATTCTACA
TCATCATATTTTTATTGATTATGTTTTCGAATATTACATTGATTTATGGA
CTGGTTAAAACAAAAGAAATCAAAACAAATACGGCCAGGTATGTATTTTC
AAAATTCCTTTTTAGCGTCCATTTGTGATTTTAGCTAAAGTTATAGCTAC
AGGTGACCCTCGCTAATTCGAACGGGGAAATCTCATTTGTTCGAATTGCA
GAGAGATTCAAAGTATAGAGAGTTTTTCAAGAGAGTTTCTCCATGACTGG
AAACAAGCTCGAAAATTATAGAAAGACTCGAATAATAGAAGTTCGAATAA
CTGAGAGTTTACTGTATATCTGCTACAATGTAAAACCTATAAGGATCTCT
ACATAGTAACAACTGACTTTAGCTAAAAATCCCAACTTGAGCACGAATCT
CCTTCCTCCTTCCAAAGGAACTATTGGACTATAGAAGCAAAGGTATGTAG
CTGTTCAGGGTTCCTTTTGTTCGTCTCGCCGTATGAGGTCCATGGGTCAA
TAAAAAAAAAAATAAAAAAAAAAATAAGTTCCTTGAAAGAGTATTGTCAG
TTGAAAGTAAAATTCTAATAACTTTTAGTAAGTTTAACTGCTGAAGATTT
TTGATTGTTATCTACCATTTTAGACTTCTGACTGCACTTAGTATTGGTGA
CCTCTTAACCGCATTGGTGCACATACCAACACATATCACCTTCACACATC
TCCAGCGTAAATCATGTATTGGCTACAGTATGGAATCCTTCTTCGCTGTT
TTCCTTGGTAAGTTTTATATAATCTTTATTTCCAAATTCCCAGCCTAAAT
GTTCTTACAAACTGGGTCAGTCTCAAAAATGATTAGACACTTTACTTTAA
TGACAATAACTCAGATTTATGCCATGTTAAAAAGTTGTACACCGTTAGAA
AGAGACTCTTTAGAAGAATTATCATAAAACCGAAAACTAGAGAAGAAAAT
GAAGATTTTTTCTTATGTTTCAAGTGCTTGGCGTAATGTTTGCATTTTAC
TGCTTTAATGAATGTCCCTTTGGCTATCACTTTCAAAACATTAATTTGTA
GGTACATCTGCTACGATTATTACTTCAGCAATGTGTCTTGATCGCTACCT
CTTCATCAGCCGCCCTTATAAACATCCCAAAACAGGAACATCGAAATATC
TGGTGATAGTTTATTTGGTCCTGGCATATTCAATATCGTTATCTTTGGCT
ATTTCAGTTGTGATCGTTGCACTTAGTGATTTCGGGTAAGGTATGATTGA
TTTAGACAGGCTATCGTCCTTTAGAAGAATAGGAAACCCGGAGTTTACTT
CCAAAGCAAAGTATGGTTTGAATATTAGCCTATTTCATAGGATTCGTGAT
TTTGGTAAATTATATTTTTCTACGTCACTGCAGTTAGGAGGGCATACGAG
GGTCCTGAACACTGAAATACCTACAGTCTTTCACAAAATCACCACAATAC
CGACACATTGTTAACGGAATACCGACAGCAAAATTTTTTCATGTTTTTTT
TCAAAATTCTACATGAGATAAGAGGATAAGAGGGATTTCTGAGAAATAGC
ACTTGATTCAGCACCGTTTCTCCAACGTTTTAAGCACAATTATCGTATCA
CCGATCGAAAATTTAACATTTTCCGTCACCGAAAAACATCTCAAACACCG
AAATACGGACTTTTTGTTGATCACCGAAATACCGAAGTAGAAAAAGGTCA
ATACCGACACACCGACAAACTGGTCAAGCTCTCTTTTGCGCATTGAAATA
AGCACGAATCCTATGGAATAGGCTAATCATTAGCTTTGGATACGAATTGA
ATCTTTTGAGAATTGAATTGAGACTTTCTTTATCTTCATTTTTGCGTGAC
AATTCTTTTCGAAAGCTGGCGTTAAATCTTTCAATACACCTTTTCGACCG
TAGTCGCGCGGGAATCTTTTAGTCCGCTTTATCCCACTAACACCGTCCCA
ATCCTTTTTTGACGCATTTTTCTATTGTCTATTGGTGCGAAAAGAGGACT
GCGACGGTTTTAGTGTTATAAAGCGGACAAAAAAATGCCCGCGCAGTAAT
GAGTGGCTACGGTCGAAAAGGTGTATCCAGCGCTTTTGTAAAAATCACAA
GGGACGCTCAAGTTATACAGGAAACAAATGGCTTCAAATCATTACTGAGG
AGATTCGCCTTTAGTTTTCGGTTTTGTCTAATTTGTCCTTTCATCTTCTG
CCTGGCCATCTCCTTTTTAGATTTCGACTTGCTACCATTTTTAACATCAT
ATCAAGCACAATATACGTGTTAATACTTTTAACATCTTTGGTCGTCAATA
CTTTATTGTATTCTTACATCCGAAATCAAACAAAAGAAATTAAGAGGTTA
TCCAATTCTCACATCCAACAGAGGGGGTGAGTAGTTTGAACTATGTATTT
CTTAGCAGAATGTTCACATGTTACTGTTCCGTTTCGATCCGGTATGATTT
TTGTTACGGATCAAGTGTGTTCATACGGAACGTTTTGGAGCATTTCGGAG
AAAGAAAACGGAGCAGTTTCGTTCCGATGAAAAAAGTATAGCGAAAGCTT
TTCTATCTGTTTTGCTTTGCTGTCTTCTTTTTTGGAGTTTCGAATTTTGA
CGTTCGCACTTGTTTTCGGAACCGTTTTGTTTCGGAACGGAACAGAACCG
TAACTGAGCCGTACTGAACAATGGCCTTAGCTGAATGTTATTTGCACTTT
GGATGAAGAAAAATGAACAAGGTTTTTTACTTTTTCCTGTTCTAAAGCAT
TTTTGGATTCTTTCAGATTTCTCAATCCGACAGCTATGGTAACTTAACGA
AATTAGCCTGCTCGATTTATGGCATATTAACAGTTTTGATTAGATACCTT
AAGGAGCCTCTTTTTGACGAACATGAACATTTTGATTGAAATGGTATAAA
AGCTAAATTTGTCTCTTTTGGAAAATAAACCATGTCTACATACGTACACT
CTCCGAGCGCGCGTCATTTATAGGCTATGGAGACTCAGTTTTCGATAGGA
CTTATATTTCGACACTTTTCAGCTGTATGAAAAAATTTTGCCATCATTAG
GATAGACCTTTTCATGAATTACGTTAAGGCCGGTCTCCGCTTTGCGTGCG
CTGCGATCGCAACTTTGGCTTCAATCATTTTTGCTTGGAGAAAAGATTAC
GTCATAAAAACGCAGCGCGCGCTTGGAAAAAAAGTTGAATGTATTTCAAC
TTTGTTTTCAAGCACGCGATCGTTACGTCATATCGCATCAATGGAGTTGC
TTCATTTTTTTTTTGACCAATAGCGTGGAAGCTTTGCTCGAAGAAGAGCG
ATTGCAGCGCGCGCAAGTGGAGACCGGCCTTTGCGAAGAACACTTACAGT
ACCTCGTTTTTGATATATTGCTATGGTAATTGGATTTTTTTTTCGTAACA
ATTAGCGGGGAGGACGTCTATTCGGGAAGACAAGAGTAGGCTCTATTGAT
AAAAGTAACACTTGAAGTCTCAAGGGATATAACCATCTTGATGGTAGTGG
TTTCAAAACGAGGCAGTCGTTGCACTCAAAATAATTTATGAAAATGCCTA
TTGTTATAGTTAGGTAATGAGACACGGGTGTAAAATTTTTTCTCTTTTTC
GAAATTCCAGGTACAAGAGGAAGGCTACCAAAACTGTACTTATTATCTCC
ATCATACAAATTTTCACAATCACACCATGGGTTATCTCCTTAATTTACAT
GACAGTAGAGTTTGGAGAAAAGAAGTATTTAGAATATATGGATACCATTT
ATTACGCTCATGTCTGGTTGAGAATGCCTGTGTTTTTAAATTCATTTTTT
Coding sequence (CDS) from alignment at sc0000081_pilon:449843..453742- >XLOC_037762 ID=XLOC_037762|Name=XLOC_037762|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1704bp|location=Sequence derived from alignment at sc0000081_pilon:449843..453742- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAGAAACATCACAAATCCTGAAGACGCATGTCGTTTTATGCTTTC
TTTGAGTCACGTGACAACCAGTCATGGCAAATTGGAACTTTCATTCTACA
TCATCATATTTTTATTGATTATGTTTTCGAATATTACATTGATTTATGGA
CTGGTTAAAACAAAAGAAATCAAAACAAATACGGCCAGATGTATAGAAAC
ATCACAAATCCTGAAGACGCATGTCGTTTTATGCTTTCTTTGAGTCACGT
GACAACCAGTCATGGCAAATTGGAACTTTCATTCTACATCATCATATTTT
TATTGATTATGTTTTCGAATATTACATTGATTTATGGACTGGTTAAAACA
AAAGAAATCAAAACAAATACGGCCAGACTTCTGACTGCACTTAGTATTGG
TGACCTCTTAACCGCATTGGTGCACATACCAACACATATCACCTTCACAC
ATCTCCAGCGTAAATCATGTATTGGCTACAGTATGGAATCCTTCTTCGCT
GTTTTCCTTGACTTCTGACTGCACTTAGTATTGGTGACCTCTTAACCGCA
TTGGTGCACATACCAACACATATCACCTTCACACATCTCCAGCGTAAATC
ATGTATTGGCTACAGTATGGAATCCTTCTTCGCTGTTTTCCTTGGTACAT
CTGCTACGATTATTACTTCAGCAATGTGTCTTGATCGCTACCTCTTCATC
AGCCGCCCTTATAAACATCCCAAAACAGGAACATCGAAATATCTGGTGAT
AGTTTATTTGGTCCTGGCATATTCAATATCGTTATCTTTGGCTATTTCAG
TTGTGATCGTTGCACTTAGTGATTTCGGGTACATCTGCTACGATTATTAC
TTCAGCAATGTGTCTTGATCGCTACCTCTTCATCAGCCGCCCTTATAAAC
ATCCCAAAACAGGAACATCGAAATATCTGGTGATAGTTTATTTGGTCCTG
GCATATTCAATATCGTTATCTTTGGCTATTTCAGTTGTGATCGTTGCACT
TAGTGATTTCGGATTTCGACTTGCTACCATTTTTAACATCATATCAAGCA
CAATATACGTGTTAATACTTTTAACATCTTTGGTCGTCAATACTTTATTG
TATTCTTACATCCGAAATCAAACAAAAGAAATTAAGAGGTTATCCAATTC
TCACATCCAACAGAGGGGATTTCGACTTGCTACCATTTTTAACATCATAT
CAAGCACAATATACGTGTTAATACTTTTAACATCTTTGGTCGTCAATACT
TTATTGTATTCTTACATCCGAAATCAAACAAAAGAAATTAAGAGGTTATC
CAATTCTCACATCCAACAGAGGGGGTACAAGAGGAAGGCTACCAAAACTG
TACTTATTATCTCCATCATACAAATTTTCACAATCACACCATGGGTTATC
TCCTTAATTTACATGACAGTAGAGTTTGGAGAAAAGAAGTATTTAGAATA
TATGGATACCATTTATTACGCTCATGTCTGGTTGAGAATGCCTGTGTTTT
TAAATTCATTTTTTGTACAAGAGGAAGGCTACCAAAACTGTACTTATTAT
CTCCATCATACAAATTTTCACAATCACACCATGGGTTATCTCCTTAATTT
ACATGACAGTAGAGTTTGGAGAAAAGAAGTATTTAGAATATATGGATACC
ATTTATTACGCTCATGTCTGGTTGAGAATGCCTGTGTTTTTAAATTCATT
TTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:449843..453742 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 664-852:190 |
| Aaloc | 508-660:1580 |
| Aaloc | 325-504:2748 |
| Aaloc | 190-321:3177 |
| Aaloc | 1-186:3901 |
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