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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000122_pilon:655280..658346+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037755 ID=XLOC_037755|Name=XLOC_037755|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3067bp|location=Sequence derived from alignment at sc0000122_pilon:655280..658346+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGGAATTATCTCTATCAAAAGAAATGACTTGTAAAAAGCTGTGGGATGC
AATTGTAATAACATGCTCTGATCATGATCATGCAATGGcatttgaaaaag
gtttgattTGGAATAATATGTTTTCACatatatcttttttcttttgaaat
attctaaaGGAATCGTTAGACTCTAATAACTTTCTttgaattcttaaaaa
attgatgGACTGAGTtatatattcaatattttttcttttgtaatatCTCT
AAAAGACTAAATATTATgtttattttagaaatatttgtcTCAAATGCATC
TATGTCATTATGAGCTCTGAAATAATTAAAACCTTTCAGTGGAATTAAAA
GGACATTATTCTCCTATGGCTTACATAAAATTTAATCTCCTTGTGCATCG
cttgagctcaaattttgagaaactCTATTGTAAATTCTACTTTGTTAGTA
TATCAGATGGATCTCCTTTCATCGTCTTAAAACAAGTACTATCTTCAAAA
TTACTACTGTACCTTTAATTTGATTCTAGAATGCTCTATTCGACAGAAGA
ATTTCTTTATCCATCCGAAAACAACAGTTCTTAGTGTTGTAGACCCAGTT
CCAAATATTGGAAGTGGTGGTGCAACCATAAACGCTATGATTCATGTCAC
TGAGTACATTAGTGCATTGGAAGGTCACACTGTAAGTTAAATTTGTAAAT
ACAAGTTCCAAAAATTGATACCAATGTGTGCTTTTTAGACAAAAACGTCT
GTTTGAGCTAAATGCAGACAATATTTTGCATTAGCGAGTCTGTAAACGCC
ACAATTTTTATGAAAGTCACGTCTGTAGGGTTTGACAGAATTCGTGAAGA
TATTGTTCTTGTATATTTTTCAATCTTAGTATCATTGAACCTCCTTCATT
GTATTTTTAGGTGATCACATCAGATGTGTTATATAGCAAGAAAATTCTCA
TCTTACATATGGTTAATATcacctttcaatttttgataatgATAAATGAA
TTCTTTGGTACTTGATATTTTAAGACTGAAACCAAACCATGTTGTATACA
ATGTTTTCTTTTAGACAACTGTTAGTCAACATTGATCTGTGCAATTTTAG
GGAGAAATTTTTAATTATGGAGAGCTTTGTGATTTTTGATGAAATctaga
atttttaataaaataaatgtaATATTTTGTCAAATGCCATAAACCAAAAT
TCTTTGCTAGGTTACTTTAAttaattcaatgatttttgaatatttttcat
tacAACACTTATTTTTGTTCAACAGGGAACCATGACACCATATTCTGCTT
GTTCATCGGGATTTTTACCAGCACCAGCACTTTTGACATGCCATGACAAT
AACAACCAGGCTGTTGTCTCTGGTGCTACACAACTGGATGTATTATTGCA
GATGACTATGAATAAggtacatttttttatatacgAGAATAGTTACATTA
AAACAATTGAGgttcaaaatgccaaaaaaggaAATAAGAATTTCAGATCA
ATTCTGAGCTTGgaataaatgaattttaaagCAAATTAAGGAGGGGTATT
TAATTTAATTTGGGTATATACCATTACCAAGCTCCATTTTTACCCAGCAA
GTTCAATTAATTATTATTGTACATattttgaagactttttatGTATTATG
TATACATAATGGAATCCATTTTTGCAATTGATTGCCAGAGATATCAGTCG
TTACAAAGTCTTTACTTCTCTCATTGCAGCTTGCAAGTGATTCACCTCCT
GGATTTTGGATTTGCAGTTGTGACAGACTGATCAACTTACCTAAGGAAAT
AAGTGAGtttttttCTGTCCTTGGTCTGTCCTAGTTTTATATTGATGCTA
AAAAATGGACTACTGTATTACATGAACTTATTTTGATAGAAGGAGCAAAT
AAAGGACTCAATGTAGCATGTAACATTGAAAAGAATTTCAGtttgaaata
ataaattttatttttcaaagatattgACTGGAGTGAGGAGAATGATGTTT
ATTTGTTCACCGTTCCTGTGAATATGGAAACAGCTGCTAATAAGCATGGC
GTTGTCAAATACAATGAAAACGTAAAGAACGTTATTCTTTATATTTATTC
ATCAATAATGTATGAATTTGGCTTTAGTGATTATCAGTGAAGGTCATTTT
AAATATAAGCGTCTTTTTGCTCTCGTTCGATGCATTAGAGTACTTTAGGG
TACTTAGGAaaaatgggtgtcgggtatgtgccataagggtcctttttcag
aaaaaccatAAAACAGTATGAGAGGGTCCCAAAAGTACGAAATAAAAAGA
CTGAGTCTTTCACAGGGTCATAAAAAGTCACGTAATTTGgaccaaattaa
aaaatgcaaaaaataagaagattttaagaacattaatttaaggcttaaaa
ctcaaaaagttaaaaatatccaaaGGCTTGAgctattttggatgttctta
taaaaagcctCTTCTGTAGACACGTGACCTGcaatcttatttttttaaca
acaaaCGAAACTTACTCTTTCTTTTCTAGGAACTGACGATTGACGATATC
ATTTATAAAGGATCTACTGAACGAATAAGTGTTTGTAAAATGAAAGACGA
AAAAGTTCCGATCGTGAGTATACTTATCCTACAAAAAATTctcataattc
aaattttagcaAGTCTTCAATTATACAACCAATATATTGCTCTAAAATTA
TCACTTTACTTGATCTTCCCCAAACTACAAATTGCGGCCTAACTTGCATA
TTCAAGATGGGCCATAATTGGGTCAGCATATCCTAATTTATAATAATCTC
TACACAAACACTAGGTTTTTTATATAGGGGATGCTAATCGTGTATAAAAT
GCGAGACTTTTAAATATTAGCTTATTTAACATCTTAAGATCAGTGTGTAA
TCTTTCTAATATTTTAGATTTCTGGTGTAGTATTTCTGAGCACCAATTTC
ATTGAGGCATTATTGAACGTCAGTATTTTTCATCCGCTGGTCTTATGGAC
TTATCTGGGTGTTGATAGCGGCTCTGACAATGTTGGAAATGTAAGAAATG
ATTCGTTAACATTTTGA Coding sequence (CDS) from alignment at sc0000122_pilon:655280..658346+ >XLOC_037755 ID=XLOC_037755|Name=XLOC_037755|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1704bp|location=Sequence derived from alignment at sc0000122_pilon:655280..658346+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGGAATTATCTCTATCAAAAGAAATGACTTGTAAAAAGCTGTGGGATGC
AATTGTAATAACATGCTCTGATCATGATCATGCAATGGcatttgaaaaag
CAGGAATTATCTCTATCAAAAGAAATGACTTGTAAAAAGCTGTGGGATGC
AATTGTAATAACATGCTCTGATCATGATCATGCAATGGcatttgaaaaag
AATGCTCTATTCGACAGAAGAATTTCTTTATCCATCCGAAAACAACAGTT
CTTAGTGTTGTAGACCCAGTTCCAAATATTGGAAGTGGTGGTGCAACCAT
AAACGCTATGATTCATGTCACTGAGTACATTAGTGCATTGGAAGGTCACA
CTAATGCTCTATTCGACAGAAGAATTTCTTTATCCATCCGAAAACAACAG
TTCTTAGTGTTGTAGACCCAGTTCCAAATATTGGAAGTGGTGGTGCAACC
ATAAACGCTATGATTCATGTCACTGAGTACATTAGTGCATTGGAAGGTCA
CACTGTGATCACATCAGATGTGTTATATAGCAAGAAAATTCTCATCTTAC
ATATGGTGATCACATCAGATGTGTTATATAGCAAGAAAATTCTCATCTTA
CATATGGGAACCATGACACCATATTCTGCTTGTTCATCGGGATTTTTACC
AGCACCAGCACTTTTGACATGCCATGACAATAACAACCAGGCTGTTGTCT
CTGGTGCTACACAACTGGATGTATTATTGCAGATGACTATGAATAAgGGA
ACCATGACACCATATTCTGCTTGTTCATCGGGATTTTTACCAGCACCAGC
ACTTTTGACATGCCATGACAATAACAACCAGGCTGTTGTCTCTGGTGCTA
CACAACTGGATGTATTATTGCAGATGACTATGAATAAgCTTGCAAGTGAT
TCACCTCCTGGATTTTGGATTTGCAGTTGTGACAGACTGATCAACTTACC
TAAGGAAATAACTTGCAAGTGATTCACCTCCTGGATTTTGGATTTGCAGT
TGTGACAGACTGATCAACTTACCTAAGGAAATAAatattgACTGGAGTGA
GGAGAATGATGTTTATTTGTTCACCGTTCCTGTGAATATGGAAACAGCTG
CTAATAAGCATGGCGTTGTCAAATACAATGAAAACatattgACTGGAGTG
AGGAGAATGATGTTTATTTGTTCACCGTTCCTGTGAATATGGAAACAGCT
GCTAATAAGCATGGCGTTGTCAAATACAATGAAAACGAACTGACGATTGA
CGATATCATTTATAAAGGATCTACTGAACGAATAAGTGTTTGTAAAATGA
AAGACGAAAAAGTTCCGATCGAACTGACGATTGACGATATCATTTATAAA
GGATCTACTGAACGAATAAGTGTTTGTAAAATGAAAGACGAAAAAGTTCC
GATCATTTCTGGTGTAGTATTTCTGAGCACCAATTTCATTGAGGCATTAT
TGAACGTCAGTATTTTTCATCCGCTGGTCTTATGGACTTATCTGGGTGTT
GATAGCGGCTCTGACAATGTTGGAAATGTAAGAAATGATTCGTTAACATT
TTGAATTTCTGGTGTAGTATTTCTGAGCACCAATTTCATTGAGGCATTAT
TGAACGTCAGTATTTTTCATCCGCTGGTCTTATGGACTTATCTGGGTGTT
GATAGCGGCTCTGACAATGTTGGAAATGTAAGAAATGATTCGTTAACATT
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000122_pilon | genome | sc0000122_pilon:655280..658346 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 703-852:2918 |
| Aaloc | 619-702:2530 |
| Aaloc | 520-618:1973 |
| Aaloc | 445-516:1730 |
| Aaloc | 304-444:1276 |
| Aaloc | 253-303:911 |
| Aaloc | 103-252:532 |
| Aaloc | 1-99:1 |
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