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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000025_pilon:1224504..1227306- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037666 ID=XLOC_037666|Name=XLOC_037666|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2803bp|location=Sequence derived from alignment at sc0000025_pilon:1224504..1227306- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGATATAATGGCTAATATGGATATTCATACATTGACAGATTATCA
GCAAACGATCTTGCAATTGCAAGATACCATTTATTTTCTGGAAGGAAAAC
TTTCAGAAAAAGATAAAGAAATTATTCGTCTAAACATCGACCTCCGTCGT
ACGATGGACGTAAGTTGAATAAATTGTTATCTTGCCGTTGTTTGATGACT
TTATAATAATGACTTTGCTACATTTCAAACTAAAGCACAAACAGCGTTAT
TATAGCTTGAAAACTTAAATTTAGCTTAAATTTTCTAATTACGTTGTTTA
GCCAACTTTATTCTACTTGCATAATATTATGTATCACTCAACTACATCGG
AAAATTCATTACTATATAACTTACTCAATTTATCGTCATTGGTCCATGTT
AATATAAGTTAGCGTCTTCTCTGATTTTTTACCGACTCTTATTTTCAGGA
GCGTCAACTTTGTCTCCAATTTGAAAATTCTGCTCTGAGGAGGAAGGCGG
CTGAACATAACAAAACCGTCCTTCCTTTGAGGAAAGAAAACAATGAATTG
CGAGCGGAAAACGAGTCTCTCACCAGTACCATTATCGAACATATGGAGAG
AGAAGCAAAACGAGGAAAAGGTAAAGACGCAGCATCGCAAACTATCGAGG
TGCAACCTAAAACAACCTCCAGTGGTTGTCAAACAATCGGTGCACAACTT
AATACAACCTCCAGTGGTTGTCAAACAATCAACAATAAGCAACCCAAGGT
TACATCCAGCGGTTGTCAAACAACCAAATTACAACCCAAAATTTCATCCA
GTGGTTGTCAAACGATCAATATGCAACTCAACAAAGTTACCTCAAGTGGT
TGTCAAACTATCAAGCTGCAACCCAAGACAACCTCCAGCGGTTGTCAAAC
TATGGAAACACAGCCCAAAACAACCTCCAGTGGTTGTCAAACGATCAATA
TGCAACCCAACAAAGTTACCTCCAGTGGTTGTCAAACTATCCAGCTGCAA
CCTAAAACAACCTCCAGTGGTTGTCAAAGAATCAACAAGCAACCCAAAGT
TACATCCAGTGGTTGTCAAACTATGGAAACACAGCCTAAAACAACCTCCA
GTGGTTGTCAAACAATCAAGACGCAACCCAAAGTTACATCCAGTGGTTGT
CAAACAATCAACAAGCAACCCAAAATAACCTCCAGTGGTTGTCAAGCAAA
TGTTTATTGGTACATCGAGGATAAGAACCCATTGAATGTTGGAGGCTTTG
GTTTACCTAAGGTATTTAAATAATTTCCACCTCTTATCGTATAAGTAGTA
ATAAAGAATATAATCTACCTCTGGCTAAACTCTGCTTTTAGACTGCACTT
GACAAGGTTACCATTATGGGAAAAATAATACCAAAGTTTTTGAGTTTTGC
GTTGAAAAACATAATTAAGAATGGAAAATCAACAAGTTTGCAACCCTGTT
TGAAATGAAAATCATTATCTTGAATCTTCACGATTGGATTAAGCAAAACT
AAAATTTATGGTACTCAGGTAAGTTATGGCATGTCTCAAAAACATGAAAA
TTACCATAATTTTTGGAAAGCATTAGCCGGCAGAAAATGAGCAAACTAAT
GATTTAATACGAAGGGTACCATGATGAAGTTTCCGTGTAGTGATGTTACC
TAATTGTTTACGTCCTCATGTTCTGACGTCAGCAAAACTTGTTTCTTAAA
TAAGTCCAGTTTGGTTAATGGTAGAAACATGAAATTTGAAATAAAGTTGC
ACATCATTAAAAGGATCATTTTGCAAAAAAAAGATTCAAACTTTGCTGTT
GTCAGCAGAAATCAGCAAAATACGAAATTTTGCAAAAAAGTGATGACGTC
AGCAAAATTTCACAAAACATAATCTTCACAAAATATATTCCATTGTTCCC
TAGATGATAATAAGATTTTTAAATCAAGTTCAAATTAGGGAGAGCTGAAC
CAATTTCCTGTATTTCCTACTTTTAGGATCTCAAAAAGCGATCACGAAAA
AGCAAGGACCAAAAGCCAAACAACAACCGTGTTTTTGGCGGCCCAAAGAA
GGGCAATAAAGCTGCTTTCAAACCATCACAAGCGGCTACAACAAACAAAG
GTGGCTTCAGACTTCCTACCGTAAGTATTTCGCCTCATCTCACATAATAT
TGATTGCTCAATTTTTTGGTCCTGTACCAGGACCTGGGAGCGCCGCAATC
CGTACCGCTCTGTTTTTTGATAATATCCGAATAAAAAACTAAGTCGTTAA
GAAAACAAGTACATCTACGCGCATTTGAAATAAAAAAATCGACAATTTGA
AGTTACCGAGTGATGGTATTTATGGTTTAATGAAGAAATGAATAAATTAT
TTTTATTACAAATTTCTTTTGGAAATTGTAGGCAGTGCCTACCAGTCTAA
GGACAAAATACATTAACAGTCTTAACTGAAAGTTCTTACCAGGATTTCTT
TAGAAATAATATATCCCGCTCGAAAAGCATTAGTATAAACTTTAGTATAC
ACCTTTTCGACCGTAGCCGCCAATTGCCACGCAGGCATTTTTTTACGTCG
TAACAACCCTAAAACCATGCCAGTTTTTTGCCGCACTTATAGACAATAGA
AAAAGGTGTATAAAAGGTCGAGTTAGATCGAGTTTAGGGGGGAGGGTAAT
TAAATAATAAAGTGGCACGCGCCTGACGGCGCGACTACAGTCGAAAAGGT
GTATTAAGAAAACAAAGAATAGTCTAAAATACACTTCGAAAAAAAGGATT
CATGTAACATTAATCTTGATTTTTATTTTTAGGACATGCGCATGCGCATG
TAA Coding sequence (CDS) from alignment at sc0000025_pilon:1224504..1227306- >XLOC_037666 ID=XLOC_037666|Name=XLOC_037666|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2274bp|location=Sequence derived from alignment at sc0000025_pilon:1224504..1227306- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGATATAATGGCTAATATGGATATTCATACATTGACAGATTATCA
GCAAACGATCTTGCAATTGCAAGATACCATTTATTTTCTGGAAGGAAAAC
TTTCAGAAAAAGATAAAGAAATTATTCGTCTAAACATCGACCTCCGTCGT
ACGATGGACATGAGTGATATAATGGCTAATATGGATATTCATACATTGAC
AGATTATCAGCAAACGATCTTGCAATTGCAAGATACCATTTATTTTCTGG
AAGGAAAACTTTCAGAAAAAGATAAAGAAATTATTCGTCTAAACATCGAC
CTCCGTCGTACGATGGACGAGCGTCAACTTTGTCTCCAATTTGAAAATTC
TGCTCTGAGGAGGAAGGCGGCTGAACATAACAAAACCGTCCTTCCTTTGA
GGAAAGAAAACAATGAATTGCGAGCGGAAAACGAGTCTCTCACCAGTACC
ATTATCGAACATATGGAGAGAGAAGCAAAACGAGGAAAAGGTAAAGACGC
AGCATCGCAAACTATCGAGGTGCAACCTAAAACAACCTCCAGTGGTTGTC
AAACAATCGGTGCACAACTTAATACAACCTCCAGTGGTTGTCAAACAATC
AACAATAAGCAACCCAAGGTTACATCCAGCGGTTGTCAAACAACCAAATT
ACAACCCAAAATTTCATCCAGTGGTTGTCAAACGATCAATATGCAACTCA
ACAAAGTTACCTCAAGTGGTTGTCAAACTATCAAGCTGCAACCCAAGACA
ACCTCCAGCGGTTGTCAAACTATGGAAACACAGCCCAAAACAACCTCCAG
TGGTTGTCAAACGATCAATATGCAACCCAACAAAGTTACCTCCAGTGGTT
GTCAAACTATCCAGCTGCAACCTAAAACAACCTCCAGTGGTTGTCAAAGA
ATCAACAAGCAACCCAAAGTTACATCCAGTGGTTGTCAAACTATGGAAAC
ACAGCCTAAAACAACCTCCAGTGGTTGTCAAACAATCAAGACGCAACCCA
AAGTTACATCCAGTGGTTGTCAAACAATCAACAAGCAACCCAAAATAACC
TCCAGTGGTTGTCAAGCAAATGTTTATTGGTACATCGAGGATAAGAACCC
ATTGAATGTTGGAGGCTTTGGTTTACCTAAGGAGCGTCAACTTTGTCTCC
AATTTGAAAATTCTGCTCTGAGGAGGAAGGCGGCTGAACATAACAAAACC
GTCCTTCCTTTGAGGAAAGAAAACAATGAATTGCGAGCGGAAAACGAGTC
TCTCACCAGTACCATTATCGAACATATGGAGAGAGAAGCAAAACGAGGAA
AAGGTAAAGACGCAGCATCGCAAACTATCGAGGTGCAACCTAAAACAACC
TCCAGTGGTTGTCAAACAATCGGTGCACAACTTAATACAACCTCCAGTGG
TTGTCAAACAATCAACAATAAGCAACCCAAGGTTACATCCAGCGGTTGTC
AAACAACCAAATTACAACCCAAAATTTCATCCAGTGGTTGTCAAACGATC
AATATGCAACTCAACAAAGTTACCTCAAGTGGTTGTCAAACTATCAAGCT
GCAACCCAAGACAACCTCCAGCGGTTGTCAAACTATGGAAACACAGCCCA
AAACAACCTCCAGTGGTTGTCAAACGATCAATATGCAACCCAACAAAGTT
ACCTCCAGTGGTTGTCAAACTATCCAGCTGCAACCTAAAACAACCTCCAG
TGGTTGTCAAAGAATCAACAAGCAACCCAAAGTTACATCCAGTGGTTGTC
AAACTATGGAAACACAGCCTAAAACAACCTCCAGTGGTTGTCAAACAATC
AAGACGCAACCCAAAGTTACATCCAGTGGTTGTCAAACAATCAACAAGCA
ACCCAAAATAACCTCCAGTGGTTGTCAAGCAAATGTTTATTGGTACATCG
AGGATAAGAACCCATTGAATGTTGGAGGCTTTGGTTTACCTAAGGATCTC
AAAAAGCGATCACGAAAAAGCAAGGACCAAAAGCCAAACAACAACCGTGT
TTTTGGCGGCCCAAAGAAGGGCAATAAAGCTGCTTTCAAACCATCACAAG
CGGCTACAACAAACAAAGGTGGCTTCAGACTTCCTACCGATCTCAAAAAG
CGATCACGAAAAAGCAAGGACCAAAAGCCAAACAACAACCGTGTTTTTGG
CGGCCCAAAGAAGGGCAATAAAGCTGCTTTCAAACCATCACAAGCGGCTA
CAACAAACAAAGGTGGCTTCAGACTTCCTACCGACATGCGCATGCGCATG
TAAGACATGCGCATGCGCATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025_pilon | genome | sc0000025_pilon:1224504..1227306 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1117-1137:22 |
| Aaloc | 973-1116:828 |
| Aaloc | 160-972:2356 |
| Aaloc | 1-159:2804 |
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