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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000025_pilon:1162676..1168066- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037663 ID=XLOC_037663|Name=XLOC_037663|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5391bp|location=Sequence derived from alignment at sc0000025_pilon:1162676..1168066- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAGCCTGCTTCACCGGAGATAGCAGAGATTAATATAGCAGAAGA
AGAATTGACAACACTTAAAGAACTACAGCAACCATTCTGGGATGAAACCG
TCAAAGACCTAACAGATATTATACCAAAAGTACCACAATGTCAAATTACA
GATAACCTCTTGGACACTGGTAAAAATTTACCAACATGCAATTCAACAGA
CTTTCTCGATGAATATGATCAAGAACATTATTCAAATTCACCAGCATTGA
AAACTACTTCTATGCAATCTCACGAAAGAGAAAGAACCATATCAGAAAAT
TGTACTAGGACTCATATCAAAGAAAAACTTTTATCAGGGGAGCAAGTCCT
TCCAGGAATGAAACGATCTTACTCTGATTCAGTAACTGATAGTGGACCAT
CAAAGGATATTAAATTACCCCGAAAAGCCATGTTGAGAACTAAAGAAGGA
GATACGTAAGTGAAAATTTACCGATTTGGCGAGTATATAGCCCATATTTT
CTAATGATCATAACCGCACCCTACACCCCCTTCTCAAAAACCCGGTAGGA
TTTTTTCAGCTAGTGGGGATAAAAATAACGGACTAAAACTCGATGGGGAT
TGATATTCCCATATTTCTTATGGCTGATAATTTTAAATTTTTTGTTTTCA
AGCCAGAAAATTCAGTGAGGATACAGGCACGACGGAAGCTTTTTATATCT
GGTACGGCGAATGAGGAAATTTAAGCGATTTCATAGCGATTTTACCGACG
AAGAGGAAAACTTCGGGTATTTTTGTGAAAATCTGGTACGGCGGCCGCCG
TACCCTGCCGTACCCGTTGCGTCGTGCCTGGGATAGGAACAATAACCTAA
TATTTTGCAGTAAGGATTTGTTTATTTGAATATTTAGAAGATAATTTTCG
ACCAGGGATGTATGTATGTATGTAATAGTTAATTTCAAGTTGACGAACAG
GTAGCAACAAAGGCTAATAAAAGTCAACGCGTCAAGGGATGATATTTTCC
AGTGGGAAGGGTTCCCAATGGGTCTGTGAGAAGGGGGTGTCACCCTGCGC
TGCACACATGATCATATAATCCTATGAAACTTATTTATCAAGCTAATCAA
ATTTCTAAAACTCAAAAACACAAAGAATGGGGTAATTCTCGGATGGAAAT
TTTATACGCGATGAACATCCCCTATATCAAAACATATCAGAGGGTATGCG
TGCAGCCTAACCCCACCCTTGTACCCTCATGACATACGGTAATCTAAGAT
GCGAAAATAATGTCCAGCCTGCACCCACAATATTTATATCAATGTTGAAA
TAACACCGTGAGATAGCATTGTGGGTTACATGTGGGTGTCACGGATCTGG
TGGAGGCGACCCCTACTAACTAGGAAAATGCATTCATTCGGTTAAAACAT
AAAATATTAGTGTTTTCAGGGGTGGATAAAGTTTCTTTGAATTTATGCCT
GAGAGCGAGCCTGAGAGTTTGAATTTCCATATAATCTCTTAAAAAAGCTA
ATAGAAAAACATATAACAAAATCTAAAAATTGAATAAAAACAAGCCTGCA
AATTGCCAACGCAATTTATTTTAGTTTATAAACAAAAGAAATTGTTTTTG
TTGTTGATTTTAAACAAACATTAATAAATCAATCCATGACTTTTATTCTC
TCTATTCCAGGCTTCTTCACCAGTTGATTTTTGATCGTCACGAATATGCA
AATACATACATTGAAGAAGATTGTGATATTCGAGAATTAAATGCTGTCAA
TCACCAAGGCCAGGTATGATATCAAAAGTTTTACATTTTTTGTATTAGGT
ATGCATGTGCTGAATCTGTTTGAAGGGGATACTCCTTCTCAGACCCACTG
GGACCACTTCCCATTGGAAAAATTGGCCAAAATATCGTCCGGAAAATTAT
ACTCTAATTTTTTATCCCCGCCGAAAATAATCAGATGAGCAAATCCTCAC
TGTAAAACATTATTTTCTATCCACACTGAGTTTCCTAGGTCGGAAACAAT
CGGTCCCCATCAAGTTTTGGTCCGTTATTTCGGTTATTTTTACCCCCACT
GGCTGAAAAAATCCCACCGGGTCTGTGAGAAGGGGGTATAAGGGGTTATA
CTTCTTTGTCGTGAAGCGACCCATCTTTATCTATAAAAATAAACAGGGCC
ATTTTCGGGCTTTGGAAATTTAAGACGACGAAGGAAAAGGATATTTTGAC
AATAATTTGAATAAAATTTCATTGCTCTTCTTTTCAAAATTTCAAATTCC
TCTAAATAATATTTTAAGGCTCAAAATTAAAAATTTTAAGGATATTCGAA
TCTTGTTAATAACTGTTTGATAAGGTAGATACATCAATATTGTGGGAAGA
TATTGTTATCAACGTTATTTTTTACACCAATATCTAGACACCACTTCACA
TTGCTGTTTATCTTGGTTCCATATCGACAATCAAAAAGATTCTTGAGAAA
CGATTGGTAGACTTGGAACGTTATGACAGTGATCTAAATACGCCTCTGCA
TTTAGCATGTATGAAAACAAACAAAGAAGAAGCATTAGAAATCTCAACGA
TATTGCTGACCAAGTGTACTTCAACTTCGATTGTCAATTCTAAGAATGAA
GAAGGCAAGTCTCTACTCTATTATCCTTTTTTACTCAGAGTCCTGAGTGA
AATGTGTTACAATGTAAGAATTTACTACTAAACTTTACAACTAATGCTCT
TCTCAGAGACTGTCATAATCTGACCAATACCATGTGTAGAATATCTTCTG
CAGCCAGTGGGGTTAAAGATAACGGATTGAAACTCGACGTGGATTTATAT
TTCCATGTTTTTTATGGCTGGAGATTTGAATTTCATTGTTTTCAAGTCAT
AAAATTTAGTGGGGATGAAAAAAATAGCACAACATTTTAACAGTGAGGAT
TTGTTTATTTGATTATTTTTAGTGGGGACAGCATTTGAGTATTATTTTCC
ACTTGGAACGATATTTTGGCCAATTTTTTCCAGTGGGAAAGGGATCTTAC
CATGTCTGTGATGTGAGAAAAGGGGTGTTAACTTCCTATTTAATCTGACA
CGTACACTTGTTTCATTTTTGTTTTGTAAATTTAGGCATTCCCAATTATA
CACAATGGGCTACTGAGACATGGGGTATTACTACATACTTAATATCTTTT
CGGACACGCAGGCTTTACATTTCTGATTCTTCCTTTTTTTCTTTCAGGGA
TGGCTCCTTTACATTTAGCAGCAGTTAGAAACGATTTAGAGTTGATAAAA
CTTCTTCGTTTGAAAGGAGCTGACATCGATTCACAGGTAAATTGAATATA
CCTCAAAACTTTGCATAAATCATATCTATAGGGTGTCAAGGTGATAACAG
GCGATGGGATCCGTGGAGCTTGTTGATGGTTAGCTCTTCAAACCAAATTG
AAACATAATTTAGGGTAAGGTCACGTAAGAATGGTCCAACGCATTTCGTC
CAACATGCCATTTTTTGAATGTAGGATAGACTCGGGGGCGGGGTACTTAG
TCAAATGGAGGGTACGGTATGTGCCGCCCTTAAGGGTACCTTTTTTGGAC
TTCCAAAGTCCCGCTAAGGGTCGGAAAAATCAGAAAATCAAATTTCAGTC
CCACTAAGGGTCGGAAAAGTAGGAAAATTTCAACTTTTTTACCCCTTGAA
AGATCGAAATTTGATCAAAATTAGTCAAATTAGTCCCGCTAAGGGTCGTA
AAATTCACAAAATTTTCTTTGGTTTTCTCTTTTTTAGTCCCGGTAAGGGT
CCAAAGTTCGAAAGTCGGGCGGCCCGTCCCCCCGTCAGCGCGCAACCCTA
GTACCCCCCCCCCCTGGGAGGATAGATTTGCTGTGCAAGGGGTCACGATA
GTGGTTAAAGATTTTACATGCCAGATTTACAATACAAATTCAGATTGTTC
ATTCGTTTTAGTCAGAGTTTCTTGCTCTTTCCAACTTAGCTGAGCGAGTT
CCTGGAAGGCTTAATTTCTGAGGTATGACGCTTTGAGGTTTGCTCACTGT
TCCCTATATGACCCACCAAATGGTGGCCTGTCTGTGCATTCAGAAAAAGT
TAATACCTATATTTCAATTTTCTTCAAAATTTTAAGGATGATAAAACTGG
GAAAACTTGTTTGATGTATCTAGCAGAAAATGATATGGAAGGGAAAACTT
TGAGTCACGTTGTCGAATATTTTGATGCTGATGTCGACAAATTTTCATAT
TGTGACAGTACTGCTCTCCACTTTGCATGTGGTAAAAACAATAGCAATGC
AGCCAGGATCTTATTGGAAAATGGCGTAAAAGTTGGTATCAAAAATGTTC
AAAAGAAATCAGAGAAAGAACTGGCTAGTGATATCGAGGTAAGCTAATGA
ACCAACTAAGAAAAAAATGGAAAAAAAGCGTATAATTTGTTTTAGTAAAA
ACTTTAGTATTTGGATACAAACCAAGCTAATTGGGAGTAATTGGGTAAAG
AAGACTTATCGTCGTTTTTTATAAGTTTCCCATTTCCGCACTAAGATTTC
TATGTCACTGTACTAGCGGAAAAAGACCAGGACTTTGGGTAATTGAAAAA
AGAGCTTCGGAAAGTTAAGCAGTTTGAGTAAACACATGATTTTCCAAACC
CTTTCCGATCTAATGCCGGTTATCTTGGGAAAAATAGCGGAAATAATTCG
GAAAAGTGACAGGAATCTTAGTGCGGAAACGGGAAATGTATAAAAAAACG
ACGGTATACAGTACCTATTTTCACAATTTCTCCTCCCAAAAGACCATGAG
TTGAAAATATCGGGCCTAAATTTAGTAGAACAAGAAACAATCGAAAATCC
CTCCTACAGGTCAGAAGCGGTAGATTTATTTCTCTACCTTTCAAGGTTCG
TTTTTTTTCCAATTTCAGCTCGAAAATAAAGTTACTTTATAAACCAATCC
TTCCAGGCCAGTTCATCCCGGGGGGGGGGTGGTACTACCCTTGTCGACCG
ACGGGGGTGCTCCGCTGAGGTTCGAAAAATGGACCCTACGGGGGACTCGA
AATTTGCGAAAAAAGTGACCCTGAATGGGACTGAATTCCAAAATTTTCTC
AAATTTTCTACTTTTTACCCAAATTTTCCAAAAATAGGCACTCTACGAGG
GACTGATTTTTCGATTTTGGTGTTTTTGCGACCCTACCTGGGACTCGTGG
AGTTTAAAAAAGGTACCCTGACCAGCGGAGCATCCCTGTAACCCATCTTG
CCCTAGTACCGGGACTTCATCAAAACAAAAATTGTGTATCTGATTTCTTT
CTTTAGATCAAGAAAATGCTTGAAAAAGAATCACGAAGGCAGAAAAGATT
ACAAAGTATAGAATCAAGACGAAAAACAAAATCGACAGAGGAAGATCTAA
TTTCCGAAAACGAATCCGAAACTGAAAATTATGGTGATTGA Coding sequence (CDS) from alignment at sc0000025_pilon:1162676..1168066- >XLOC_037663 ID=XLOC_037663|Name=XLOC_037663|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2502bp|location=Sequence derived from alignment at sc0000025_pilon:1162676..1168066- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAGCCTGCTTCACCGGAGATAGCAGAGATTAATATAGCAGAAGA
AGAATTGACAACACTTAAAGAACTACAGCAACCATTCTGGGATGAAACCG
TCAAAGACCTAACAGATATTATACCAAAAGTACCACAATGTCAAATTACA
GATAACCTCTTGGACACTGGTAAAAATTTACCAACATGCAATTCAACAGA
CTTTCTCGATGAATATGATCAAGAACATTATTCAAATTCACCAGCATTGA
AAACTACTTCTATGCAATCTCACGAAAGAGAAAGAACCATATCAGAAAAT
TGTACTAGGACTCATATCAAAGAAAAACTTTTATCAGGGGAGCAAGTCCT
TCCAGGAATGAAACGATCTTACTCTGATTCAGTAACTGATAGTGGACCAT
CAAAGGATATTAAATTACCCCGAAAAGCCATGTTGAGAACTAAAGAAGGA
GATACATGAAGAAGCCTGCTTCACCGGAGATAGCAGAGATTAATATAGCA
GAAGAAGAATTGACAACACTTAAAGAACTACAGCAACCATTCTGGGATGA
AACCGTCAAAGACCTAACAGATATTATACCAAAAGTACCACAATGTCAAA
TTACAGATAACCTCTTGGACACTGGTAAAAATTTACCAACATGCAATTCA
ACAGACTTTCTCGATGAATATGATCAAGAACATTATTCAAATTCACCAGC
ATTGAAAACTACTTCTATGCAATCTCACGAAAGAGAAAGAACCATATCAG
AAAATTGTACTAGGACTCATATCAAAGAAAAACTTTTATCAGGGGAGCAA
GTCCTTCCAGGAATGAAACGATCTTACTCTGATTCAGTAACTGATAGTGG
ACCATCAAAGGATATTAAATTACCCCGAAAAGCCATGTTGAGAACTAAAG
AAGGAGATACGCTTCTTCACCAGTTGATTTTTGATCGTCACGAATATGCA
AATACATACATTGAAGAAGATTGTGATATTCGAGAATTAAATGCTGTCAA
TCACCAAGGCCAGGCTTCTTCACCAGTTGATTTTTGATCGTCACGAATAT
GCAAATACATACATTGAAGAAGATTGTGATATTCGAGAATTAAATGCTGT
CAATCACCAAGGCCAGACACCACTTCACATTGCTGTTTATCTTGGTTCCA
TATCGACAATCAAAAAGATTCTTGAGAAACGATTGGTAGACTTGGAACGT
TATGACAGTGATCTAAATACGCCTCTGCATTTAGCATGTATGAAAACAAA
CAAAGAAGAAGCATTAGAAATCTCAACGATATTGCTGACCAAGTGTACTT
CAACTTCGATTGTCAATTCTAAGAATGAAGAAGACACCACTTCACATTGC
TGTTTATCTTGGTTCCATATCGACAATCAAAAAGATTCTTGAGAAACGAT
TGGTAGACTTGGAACGTTATGACAGTGATCTAAATACGCCTCTGCATTTA
GCATGTATGAAAACAAACAAAGAAGAAGCATTAGAAATCTCAACGATATT
GCTGACCAAGTGTACTTCAACTTCGATTGTCAATTCTAAGAATGAAGAAG
GGATGGCTCCTTTACATTTAGCAGCAGTTAGAAACGATTTAGAGTTGATA
AAACTTCTTCGTTTGAAAGGAGCTGACATCGATTCACAGGGATGGCTCCT
TTACATTTAGCAGCAGTTAGAAACGATTTAGAGTTGATAAAACTTCTTCG
TTTGAAAGGAGCTGACATCGATTCACAGGATGATAAAACTGGGAAAACTT
GTTTGATGTATCTAGCAGAAAATGATATGGAAGGGAAAACTTTGAGTCAC
GTTGTCGAATATTTTGATGCTGATGTCGACAAATTTTCATATTGTGACAG
TACTGCTCTCCACTTTGCATGTGGTAAAAACAATAGCAATGCAGCCAGGA
TCTTATTGGAAAATGGCGTAAAAGTTGGTATCAAAAATGTTCAAAAGAAA
TCAGAGAAAGAACTGGCTAGTGATATCGAGGATGATAAAACTGGGAAAAC
TTGTTTGATGTATCTAGCAGAAAATGATATGGAAGGGAAAACTTTGAGTC
ACGTTGTCGAATATTTTGATGCTGATGTCGACAAATTTTCATATTGTGAC
AGTACTGCTCTCCACTTTGCATGTGGTAAAAACAATAGCAATGCAGCCAG
GATCTTATTGGAAAATGGCGTAAAAGTTGGTATCAAAAATGTTCAAAAGA
AATCAGAGAAAGAACTGGCTAGTGATATCGAGATCAAGAAAATGCTTGAA
AAAGAATCACGAAGGCAGAAAAGATTACAAAGTATAGAATCAAGACGAAA
AACAAAATCGACAGAGGAAGATCTAATTTCCGAAAACGAATCCGAAACTG
AAAATTATGGTGATTGAATCAAGAAAATGCTTGAAAAAGAATCACGAAGG
CAGAAAAGATTACAAAGTATAGAATCAAGACGAAAAACAAAATCGACAGA
GGAAGATCTAATTTCCGAAAACGAATCCGAAACTGAAAATTATGGTGATT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025_pilon | genome | sc0000025_pilon:1162676..1168066 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1117-1251:136 |
| Aaloc | 865-1116:1306 |
| Aaloc | 778-864:2193 |
| Aaloc | 559-774:3005 |
| Aaloc | 457-558:3731 |
| Aaloc | 1-453:5392 |
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