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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000337_pilon:78573..82747- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037658.2 ID=XLOC_037658.2|Name=XLOC_037658.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4175bp|location=Sequence derived from alignment at sc0000337_pilon:78573..82747- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAACCAAACGTAGAGGAAGCAATGGGCTTGATTGGAATAAAACTGT
AAGTCCATAATTATATTGAAGTTTAACTAAATTATTTTTGTTTCATCAGA
AATTTCAGGCTGATTTTGGATTCTTACAAGATTGTTAGAGTATTTTTTAT
GGTTCTATTACTGTTTTCCTATTTCACTGCCTTGAATTGCAGTGTTGTGT
TTTAAATAATTTAAAATAGAATCTCAGCAAATATATTTCATGCCAATTAA
CGAATTTGGATTGTATTTACTGGACAGCGGCCGATTTTTTAGGGACGCTG
AAAGACAAGGGGCACCAAAAGGCGTCTGTGATTTCTAATTTTGGCGCCCC
TTATCTTAAAATTAGCAGTTTTCACTGGTTTTCAGCCAAAAAGAAAGAAA
ATATCCAAAAATTGTAGTGTTCCGTAAATTGGCCATTTTATTCTTTTCAG
GTAAAATTGATTGAATCCAAAAAGGATCGTAATCGCAGAAACCGAGATTA
CATAGAACAAGTAAAAACGAAGGTAAAAATGACGACAGCTTCAGTGACTC
ACTACTCAGAAGTTTTTTAGAAGGCATAGTTTCATTTATTTTAAAAATTT
GTGTTACTTACCGAATTTTCTTACTCAGAAAAAAAGTACTCGTGTGGTTG
TGGAGAAATTTTCCTAACCTTCTTTGATTTAAATTTATGTTAACTATTTT
CGTCAGGCTCATGAATGGAATGTTTATTGCAAAACTACAGTTGGATTTGT
TGCAATTTATGAGGAAAAAATACATTATAGTGGTAGGATTCAAACTCTTA
ACTTTTTACCGACTTGCTTAAATGGTTTGTGGACCGTGTCGTAAAATATT
GCCTTTGTCAATCATCCGGCGTTTCATAAAAGAAAACAACAAAATTGTTC
TACAACTTAAAGTTAAAACCTGACGGCAGATTGGGGGGGGGCAGACGTCA
CCTCCTCTCGTTACATTAGCATTATCAAAATATGATTATAATTGTTTTAT
TTGAGCCAAGAATCCATTTTTCATTTCAAAGGTAATAATCAGTCAATGGT
AAATTTTCTAAATGACGAACGAGTGCTGACGATTCTAAAGGAATATTGTA
CATTCACAGGTATTGTATTTGATCACTCTTGGTTATTTTTCTTTCCATTG
AATTCTGGTGCTTTTTTACCTTTTCTATATTTAGAAGTAGAGTTATGAAA
ATGGCTTATGAGGATTGCTATGCATGGTAGAATTCTGACCGCTTTTGAAA
ATATTGGCTGGAAAAGGATTCTGACCGCTTTATTTGGGAAACTCTGCATA
TGTAAAATTCTTTATTGCCATTTTATATTTTCTTTAAAGTTTTGGCAAAA
TAAAAAGTTTTTTCATAGCAAAATAGTAATCATCAAATTTAGGATAGGAG
AAAAGAAACGACTCCCTTGTAATATTACAATATTTCTACTAAACAGATAA
GTTGGAAGTGAAGAAAGTTTCAAGAAAAACAAATATTTGTGGTATGAGTG
GTTTTCTCTTTAAAATCTTTAAGCTTTCATATAATGTAATGTAATCCTTT
TAGAATCCTTGAGTTAATCCATTTCTTGTAATAATTATATTCCAGCTACT
AAAAAAGAAAGAAAAACAAAAAGGAAAACTGGAATAAATCACCATTCGAC
TGAAATAAGTAAATATGATTTATTGCAGAAAATGTTATCAGCAATTCACT
TGAATAAGAAAAAATTCCTTGTTATAATGACTGAAATTCAAAATAATTTC
TATAATTTGTAGAGATAATTTGTACTTGCTCTGGAAACGTTAATAGGATG
GGAAGTAGATTATCAAAGCTGGCAAGTAACAGATTTACATTTTGTAACTT
CTCGTTGACAAACTGTAATCAAAACAATATTTGAATCCTATTTTAGCAAA
AAAGAGAAAAGAAGAAAAGAAAGCTGAAGAAAATAGCTTTCACACTAAAA
CAAGTAAACAAACTTTCACCGCACATTTCGATAATTTATTAGGGTAAATT
ACCAAAAGGTTAATACGATAGATCTAACTAAAGAACTTTCTTGAAAATTG
AAAAAATTTATTTCGTGGTTCAATCTACGAAGTTTTTACATACTTTTTGA
TAAAAGGTATATATTTGCTTGTCACAGTTTTTCTTTGACACTCTATATTT
TTTACTGAACAACCGATCCCTTTCCGATAAGATATCCCTCGTCCGTTATA
TTTGTTGATTGTTTGTTTTAGACTGCTGCAAAGACTTTTGTCTGAAACCA
GTTAAACCGATATACTCCCAAACGTTTACTTGTGACAAGTGCCTCAAGAC
TTTTCATAGTAAATGTGTGGAGCTTGGGACGTCACAACCCCGATCATGTG
GATGTCACTTAATCACACCTCTGATCGTAGAGCATAAACGGTAATTGTGT
ACCTCTGAGGCTTTTAAAAAGAAAAGGTTCCTGAGACTTTAATTATAATT
TTAATTTCATATACGTGTTTATTTATGGTCAATCTTATAAATTTGACAAC
GGGGATATCTCCTCTCATAGTAAGGGCTATCATTAGACTGAGAGGGAAAG
ATTTCCTAAGGTCTCATCTCACAGCTGCATTTCCTGAAAAAGATTTTACA
AGAGCGATAAGGGTAAATTTGTAAAATTTTTCTGCAAGGAAACTCAAATC
AAGTCTCTGGTGTGACTATACCATCGCGTATACCATCGCGTTTTTTTCTG
ATAAAAAAGCCCTGGTACCGAAAGGTGGAGGGGGGGTTTACAAGGGGTTA
AATGAAAATCTCTCTCAAAGTAGAAGAGGATAATTTTTATTGGATCGCCC
TAAAGCTAGGAGACTATTAAGAATGAAAAATTGAAAAGTCATCATTTTAA
AAAGCTAAAATTTAAATTTTATTTGCTGCAGTTGTATAACGAAAGTTTTG
TGTTGATTTCAAACAGGCTATCTTGGTTGGAAGATCTCGCTGAGTTTAAA
AAGAGATATTTAAGAACTCACCTTGAAAGCATAAAACACATAGTAAGTTA
CTAAAGTCTGTCTCAATATAAATATATAAATTGAATATTGTACTTCTAGG
AAAGAAATGAGAATTATCATTGTTGTTGCTTTAGATATCTGGCTGGTTGA
CTTTCGTTTTTCTGAGTCAACCAGTGATCAACTGTGAGCTGTATTATTTT
TGACTGAATAAGTTTTTTTGAAAATGGTGTTAGTGATAATGGTCAAAGTT
TGAAAATTCATAAAAATGGTGATAATAGCACAATAGTAGAAGATTTCAAA
CAAATTTCACTTGATAATATTCTACTGGCAAATACCTTTTTAACGGTCAC
AAAATCGCATTCTCATTCAAACAAATTCAATAGTTACAGCCATTCTTATA
TCTGGAAAGACTTTAGTAAAAGCATGTTTTGAATCCATTTCTAGATATTG
CAACGTAATGATGGATATCATGAGTCCCTGTCCTTGAGCATATTACCATT
GTTTAAACCATATATTGTAAGTATCAGGAAAAGACTATTTAATGCTTTTT
TGCTTCTTGACAAACTGTTCCAAGGCACATCGAATGTTTTGGAAAGATTT
CGAATAAAATAGACAGAATAGTTACATTCAATTTTCTATAATCTACATAA
CTGTTTTTCTTTACTTCAGGGTTTTTAATCCTGCTAAAAGTTCTGAGAAA
CCCTGAAATATTTCGATTATGTTTAATCACATCCACTTTGCTTGATTTAT
TTCTAAATTTTCGTATTTTTAACTCGATTTCGAACTCTTGGAACCTTTAT
CATAGCTGTGTATCTTTGTATTTTCAGATTGACTATGTAGAAGGTTCATT
AAAGGAAGTGCTACCCGATGCAGATGCCAAATTATTAAAAGATTTTTTCC
TTCCAGAGGTAAAGCAATACTTCAAGTTTTTCTTCACCTTTTATTTAAAA
CTTACAAGAAATAGTTTGGGTCTGAAAACTTTTTGTAGAAATAATGAGGA
AATTGTAAATTAAGTTTTCGAGACAACTCCAAAGATTTTTTAAATTGTCG
ATTTTACCTAAAGAAAATTCCAGTAAATTCTTCGGGAAAAAATGTTTTGA
AATACCCTACAACAGTTTACCACTCCACTGAGACTTATGCTTTTTACATT
TAGCTGATGGTTCGCACGATATCAAAAGAGTGCAATTGTCCGGTGTTGGC
TATTCGAAGGCTGCTACTGGAGAAG Coding sequence (CDS) from alignment at sc0000337_pilon:78573..82747- >XLOC_037658.2 ID=XLOC_037658.2|Name=XLOC_037658.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1872bp|location=Sequence derived from alignment at sc0000337_pilon:78573..82747- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAACCAAACGTAGAGGAAGCAATGGGCTTGATTGGAATAAAACTAT
GTCAACCAAACGTAGAGGAAGCAATGGGCTTGATTGGAATAAAACTGTAA
AATTGATTGAATCCAAAAAGGATCGTAATCGCAGAAACCGAGATTACATA
GAACAAGTAAAAACGAAGGTAAAATTGATTGAATCCAAAAAGGATCGTAA
TCGCAGAAACCGAGATTACATAGAACAAGTAAAAACGAAGGCTCATGAAT
GGAATGTTTATTGCAAAACTACAGTTGGATTTGTTGCAATTTATGAGGAA
AAAATACATTATAGTGGCTCATGAATGGAATGTTTATTGCAAAACTACAG
TTGGATTTGTTGCAATTTATGAGGAAAAAATACATTATAGTGGTAATAAT
CAGTCAATGGTAAATTTTCTAAATGACGAACGAGTGCTGACGATTCTAAA
GGAATATTGTACATTCACAGGTATTGTATTTGGTAATAATCAGTCAATGG
TAAATTTTCTAAATGACGAACGAGTGCTGACGATTCTAAAGGAATATTGT
ACATTCACAGGTATTGTATTTGAATCCTTGAGTTAATCCATTTCTTGTAA
TAATTATATTCCAGCTACTAAAAAAGAAAGAAAAACAAAAAGGAAAACTG
GAATAAATCACCATTCGACTGAAATAAGTAAAATCCTTGAGTTAATCCAT
TTCTTGTAATAATTATATTCCAGCTACTAAAAAAGAAAGAAAAACAAAAA
GGAAAACTGGAATAAATCACCATTCGACTGAAATAAGTAATTTAGCAAAA
AAGAGAAAAGAAGAAAAGAAAGCTGAAGAAAATAGCTTTCACACTAAAAC
AATTTAGCAAAAAAGAGAAAAGAAGAAAAGAAAGCTGAAGAAAATAGCTT
TCACACTAAAACAATTTTAGACTGCTGCAAAGACTTTTGTCTGAAACCAG
TTAAACCGATATACTCCCAAACGTTTACTTGTGACAAGTGCCTCAAGACT
TTTCATAGTAAATGTGTGGAGCTTGGGACGTCACAACCCCGATCATGTGG
ATGTCACTTAATCACACCTCTGATCGTAGAGCATAAACGTTTTAGACTGC
TGCAAAGACTTTTGTCTGAAACCAGTTAAACCGATATACTCCCAAACGTT
TACTTGTGACAAGTGCCTCAAGACTTTTCATAGTAAATGTGTGGAGCTTG
GGACGTCACAACCCCGATCATGTGGATGTCACTTAATCACACCTCTGATC
GTAGAGCATAAACGCAGGCTATCTTGGTTGGAAGATCTCGCTGAGTTTAA
AAAGAGATATTTAAGAACTCACCTTGAAAGCATAAAACACATACAGGCTA
TCTTGGTTGGAAGATCTCGCTGAGTTTAAAAAGAGATATTTAAGAACTCA
CCTTGAAAGCATAAAACACATAATATTGCAACGTAATGATGGATATCATG
AGTCCCTGTCCTTGAGCATATTACCATTGTTTAAACCATATATTATATTG
CAACGTAATGATGGATATCATGAGTCCCTGTCCTTGAGCATATTACCATT
GTTTAAACCATATATTATTGACTATGTAGAAGGTTCATTAAAGGAAGTGC
TACCCGATGCAGATGCCAAATTATTAAAAGATTTTTTCCTTCCAGAGATT
GACTATGTAGAAGGTTCATTAAAGGAAGTGCTACCCGATGCAGATGCCAA
ATTATTAAAAGATTTTTTCCTTCCAGAGCTGATGGTTCGCACGATATCAA
AAGAGTGCAATTGTCCGGTGTTGGCTATTCGAAGGCTGCTACTGGAGAAG
CTGATGGTTCGCACGATATCAAAAGAGTGCAATTGTCCGGTGTTGGCTAT
TCGAAGGCTGCTACTGGAGAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000337_pilon | genome | sc0000337_pilon:78573..82747 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 844-915:73 |
| Aaloc | 763-843:399 |
| Aaloc | 691-762:782 |
| Aaloc | 613-690:1262 |
| Aaloc | 553-609:1845 |
| Aaloc | 493-552:1914 |
| Aaloc | 457-492:1959 |
| Aaloc | 394-453:2284 |
| Aaloc | 337-390:2570 |
| Aaloc | 289-336:2621 |
| Aaloc | 199-285:3143 |
| Aaloc | 121-195:3470 |
| Aaloc | 49-120:3726 |
| Aaloc | 1-48:4176 |
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