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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000147_pilon:832090..836251+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037658 ID=XLOC_037658|Name=XLOC_037658|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4162bp|location=Sequence derived from alignment at sc0000147_pilon:832090..836251+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAACCAAACGTAGAGGAAGCAATGGGCTTGATTGGAATAAAACTGT
AAGTCCATAATTATATTGAAGTTtaactaaattattttttgtttcatcat
CAGAATTTTCAGGCTGATTTTGGATTCTTACAAGATTGTTAGAGTATTTT
TTATGGTTCTATTACTGTTTTCCTATTTCACTGCCTTGAATTGCAGTGTt
gtgttttaaataatttaaaatagaaTCTCAGCAAATATATTTCATGCCAA
TTAACGAATTTGGATTGTATTTACTGGACAGCGGCCGATTTTTTAGGGAC
GCTGAAAGACGGGGCACCAAAAGGCGTCTGTGATTTctaattttggcgcc
ccttatCTTAAAATTAGCAGTTTTCACTggttttcagccaaaaagaagga
aaatatccaaaaattgtaGTGTTTTGGCCATTTTATTCTTTTCAGGTAAA
ATTGATTGAATCCAAAAAGGATCGTAATCGCAGAAACCGAGATTACATAG
AACAAGTAAAAACGAAGGTAAAAATGACGACAGCTTCAGTGACTCACTAC
TCAGAAGTTTTTTAGAAGGCATagtttcatttattttaaaaatttgtgtt
ACTTACCGAATTTTCTTACTCAGaaaaaaaGTACTCGTGTGGTTGTGGAG
AAATTTTCCTAACCTTCTTTGATTTAAATTTATGTTAACTATTTTCGTCA
GGCTCATGAATGGAATGTTTATTGCAAAACTACAGTTGGATTTGTTGCAA
TTTATGAGGAAAAAATACATTATAGTGGTAGGATTCAAACTCTTAACTTT
TTACCGACTTGCTTAAATGGTTTGTGGACCGTGTCGTAAAATATTGCCTT
TGTCAATCATCCGGCGtttcataaaagaaaacaacaaaattgttCTACAA
CTTAAAGTTAAAACCTGACGGCagattggggggggggggcagacgTCACC
TCCTCTCGTTACATTAGCATTATCAAAATATGATTATAATTGTTTTATTT
GAGCCAAGAatccatttttcatttcaaaggtAATAATCAGTCAATGGTAA
ATTTTCTAAATGACGAACGAGTGCTGACGATTCTAAAGGAATATTGTACA
TTCACAGGTATTGTATTTGATCACTCTTGGTTATTTTTCTTTCCATTGAA
TTCTGGtgcttttttaccttttctatATTTAGAAGTAGAGTTATGAAAAT
GGCTTATGAGGATTGCTATGCATGGTAGAATTCTGACcgcttttgaaaat
attggctGGAAAAGGATTCTGACCGCTTTATTTGGGAAACTCTGCATATG
Taaaattctttattgccattttatattttctttaaagttttggcaaaata
aaaagttttttcatagcAAAATAGTAATCATCAAATTTAGGATAGGAGAA
AAGAAACGACTCCCTTGTAATATTACAATATTTCTACTAAACAGATAAGT
TGGAAGTGAAGaaagtttcaagaaaaacaaatatttgtGGTATGAGTGGT
TTTCTCTTTAAAATCTTTAAGCTTTCATATAATGTAATGTAATCCTTTTA
GAATCCTTGAGTTAATCCATTTCTTGTAATAATTATATTCCAGctactaa
aaaagaaagaaaaacaaaaaggaaaactGGAATAAATCACCATTCGACTG
AAATAAGTAAATATGATTTATTGCAGAAAATGTTATCAGCAATTCACTTG
AATAAGAATAAATTCCTTGTTATAAtgactgaaattcaaaataatttcta
taatttGTAGAGATAATTTGTACTTGCTCTGGAAACGTTAATAGGATGGG
AAGTAGATTATCAAAGCTGGCAAGTAACAGATTTACATTTTGTAACTTCT
CGTTGACAAACTGTAATCAAAACAATATTTGAATcctattttagcaaaaa
agagaaaagaagaaaagaaagctgaagaaaatagctttcacactaaaaca
agtaaacaaactttCACCGCACATTTCGATAATTTATTAGGGTAAATTAC
CAAAAGGTTAATACGATAGATCTAACTAAAGAActttcttgaaaattgaa
aaaatttatttcgtggTTCAATCTACGAAGTTTTTCtatactttttgata
aaaggtaTATATTTGCTTGTCACAGTTTTTCTTTGACACTCTATATTTTT
TACTGAACAACCGATCCCTTTCCGATAAGATATCCCTCGTCCGTTATATT
TGTTGATTGTTTGTTTTAGACTGCTGCAAAGACTTTTGTCTGAAACCAGT
TAAACCGATATACTCCCAAACGTTTACTTGTGACAAGTGCCTCAAGACTT
TTCATAGTAAATGTGTGGAGCTTGGGACGTCACAACCCCGATCATGTGGA
TGTCACTTAATCACACCTCTGATCGTAGAGCATAAACGGTAATTGTGTAC
CTCTGAGgcttttaaaaagaaaaggTTCCTGAGActttaattataatttt
aatttcataTACGTGTTTATTTATGGTCAATCTTATAAATTTGACAACGG
GGATATCTCCTCTCATAGTAAGGGCTATCATTAGACTGAGAGGGAAAGAT
TTCCTAAGGTCTCATCTCACAGCTGCATTTcctgaaaaagattttacaag
AGCGATAAGggtaaatttgtaaaaattttctgCAAGGAAACTCAAATCAA
GTCTCTGGTGTGACTATACCATCGCgtttttttctgataaaaaagcCCTG
GTACCGAAAGGTGGAGGGGGGTTTACAAGGggttaaatgaaaatctctct
CAAAGTAGAAGAGGATAATTTTTATTGGATCGCCCTAAAGCTAGGAGACT
ATTaagaatgaaaaattgaaaagtcatcattttaaaaagctaaaatttaa
attttatttgctgcAGTTGTATAACGAAAGTTTTGTGTTGATTTCAAACA
GGCTATCTTGGTTGGAAGATCTCGCTGAGTTTAAAAAGAGATATTTAAGA
ACTCACCTTGAAAGCATAAAACACATAGTAagttactaaagtctgtctca
atataaatatataaattgAATATTGTACTTCTAGGAAAGAAATGAGAATT
ATCATTGTTGTTGCTTTAGATATCTGGCTGGTTGACTTTCGTTTTTCTGA
GTCAACCAGTGATCAACTGTGAGCTGTAttatttttgactgaataagttt
ttttgaaaatggtgtTAGTGATAATggtcaaagtttgaaaattcataaaa
atggtGATAATAGCACAATAGTAGAAGATTTCAAACAAATTTCACTTGAT
AATATTCTACTCGCAAATACCTTTTTAACGGTCAAAAAATCGCATTCTCA
TTCAAACAAATTCAATAGTTACAGCCATTCTTATATCTGGAAAGACTTTA
GTAAAAGCATGTTTTGAATCCATTTCTAGATATTGCAACGTAATGATGGA
TATCATGAGTCCCTGTCCTTGAGCATATTACCATTGTTTAAACCATATAT
TGTAAGTATCAGGAAAAGACTatttaaaatgcttttttgCTTCTTGACAA
ACTGTTCCAAGGCACATCGAATGTTTTGGAAAGATTTCGAATAAAATAGA
CAGAATAGTTACATTCAATTTTCTATAATCTAcataattgtttttcttta
cttcagGTTTTTTAATCCTGCTAAAAGTTCTGAGAAACCCTGAAATATTT
CGATTATGTTTAATCACATCCACTTTGCTTGattcatttctaaattttcg
taCTTTTAACTCGATTTCGAACTCTTGGAACCTTTATCATAGCTGTGTAT
CTTTGTATTTTCAGATTGACTATGTAGAAGGTTCATTAAAGGAAGTGCTA
CCCGATGCAGATGCCAaattattaaaagattttttccttcCAGAGGTAAA
GCAATACTTCAAGTTTTTCTTCACCTTTTATTTAAAACTTACAAGAAATA
GtttgggtctgaaaactttttgtagaaataatgAGGAAATTGTAAATTAA
GTTTTCGAGACAACtccaaagattttttaaattgtcgatTTTACCTAAAG
AAAATTCCAGTAAATTCTTcgggaaaaaatgttttgaaataccCTACAAC
AGTTTACCACTCCACTGAGACTTATGCTTTTTACATTTAGCTGATGGTTC
GCACGATATCAAAAGAGTGCAATTGTCCGGTGTTGGCTATTCGAAGGCTG
CTACTGGAGAAG Coding sequence (CDS) from alignment at sc0000147_pilon:832090..836251+ >XLOC_037658 ID=XLOC_037658|Name=XLOC_037658|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1872bp|location=Sequence derived from alignment at sc0000147_pilon:832090..836251+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAACCAAACGTAGAGGAAGCAATGGGCTTGATTGGAATAAAACTAT
GTCAACCAAACGTAGAGGAAGCAATGGGCTTGATTGGAATAAAACTGTAA
AATTGATTGAATCCAAAAAGGATCGTAATCGCAGAAACCGAGATTACATA
GAACAAGTAAAAACGAAGGTAAAATTGATTGAATCCAAAAAGGATCGTAA
TCGCAGAAACCGAGATTACATAGAACAAGTAAAAACGAAGGCTCATGAAT
GGAATGTTTATTGCAAAACTACAGTTGGATTTGTTGCAATTTATGAGGAA
AAAATACATTATAGTGGCTCATGAATGGAATGTTTATTGCAAAACTACAG
TTGGATTTGTTGCAATTTATGAGGAAAAAATACATTATAGTGgtAATAAT
CAGTCAATGGTAAATTTTCTAAATGACGAACGAGTGCTGACGATTCTAAA
GGAATATTGTACATTCACAGGTATTGTATTTGgtAATAATCAGTCAATGG
TAAATTTTCTAAATGACGAACGAGTGCTGACGATTCTAAAGGAATATTGT
ACATTCACAGGTATTGTATTTGAATCCTTGAGTTAATCCATTTCTTGTAA
TAATTATATTCCAGctactaaaaaagaaagaaaaacaaaaaggaaaactG
GAATAAATCACCATTCGACTGAAATAAGTAAAATCCTTGAGTTAATCCAT
TTCTTGTAATAATTATATTCCAGctactaaaaaagaaagaaaaacaaaaa
ggaaaactGGAATAAATCACCATTCGACTGAAATAAGTAAtttagcaaaa
aagagaaaagaagaaaagaaagctgaagaaaatagctttcacactaaaac
aatttagcaaaaaagagaaaagaagaaaagaaagctgaagaaaatagctt
tcacactaaaacaaTTTTAGACTGCTGCAAAGACTTTTGTCTGAAACCAG
TTAAACCGATATACTCCCAAACGTTTACTTGTGACAAGTGCCTCAAGACT
TTTCATAGTAAATGTGTGGAGCTTGGGACGTCACAACCCCGATCATGTGG
ATGTCACTTAATCACACCTCTGATCGTAGAGCATAAACGTTTTAGACTGC
TGCAAAGACTTTTGTCTGAAACCAGTTAAACCGATATACTCCCAAACGTT
TACTTGTGACAAGTGCCTCAAGACTTTTCATAGTAAATGTGTGGAGCTTG
GGACGTCACAACCCCGATCATGTGGATGTCACTTAATCACACCTCTGATC
GTAGAGCATAAACGCAGGCTATCTTGGTTGGAAGATCTCGCTGAGTTTAA
AAAGAGATATTTAAGAACTCACCTTGAAAGCATAAAACACATACAGGCTA
TCTTGGTTGGAAGATCTCGCTGAGTTTAAAAAGAGATATTTAAGAACTCA
CCTTGAAAGCATAAAACACATAATATTGCAACGTAATGATGGATATCATG
AGTCCCTGTCCTTGAGCATATTACCATTGTTTAAACCATATATTATATTG
CAACGTAATGATGGATATCATGAGTCCCTGTCCTTGAGCATATTACCATT
GTTTAAACCATATATTATTGACTATGTAGAAGGTTCATTAAAGGAAGTGC
TACCCGATGCAGATGCCAaattattaaaagattttttccttcCAGAGATT
GACTATGTAGAAGGTTCATTAAAGGAAGTGCTACCCGATGCAGATGCCAa
attattaaaagattttttccttcCAGAGCTGATGGTTCGCACGATATCAA
AAGAGTGCAATTGTCCGGTGTTGGCTATTCGAAGGCTGCTACTGGAGAAG
CTGATGGTTCGCACGATATCAAAAGAGTGCAATTGTCCGGTGTTGGCTAT
TCGAAGGCTGCTACTGGAGAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000147_pilon | genome | sc0000147_pilon:832090..836251 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 844-915:4091 |
| Aaloc | 763-843:3765 |
| Aaloc | 691-762:3380 |
| Aaloc | 613-690:2900 |
| Aaloc | 553-609:2330 |
| Aaloc | 493-552:2261 |
| Aaloc | 457-492:2216 |
| Aaloc | 394-453:1891 |
| Aaloc | 337-390:1605 |
| Aaloc | 289-336:1554 |
| Aaloc | 199-285:1032 |
| Aaloc | 121-195:702 |
| Aaloc | 49-120:446 |
| Aaloc | 1-48:1 |
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