XLOC_037648 (mRNA) -

Overview
NameXLOC_037648
Unique NameXLOC_037648
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000025_pilon:1775027..1776937+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037648 ID=XLOC_037648|Name=XLOC_037648|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1911bp|location=Sequence derived from alignment at sc0000025_pilon:1775027..1776937+ (Clytia hemisphaerica_ch_hm2_pilon)
GCGAACTCAATAATTTTGCTTGTAAATTATTAATCACACGTTCCTTTTTT CAGCTATCCTAATATTAGAGGAAAAATTAAAACTGCCACAAGAGCATTCA AACATTAGCAGGGTTTGTATGCCGGACACTCGTGCACCTATCTCGGACGA TCAAACATGTTATATTGTGGGTTATGGATTTACGACTTTCAATGGAAACA AATCTGATGATTTACGACATTCGAAGATTAATCTGGTACCAGTTGATACT TGTAATCAAGGTAattaattcttcttttctgctctttttcattttcacat ggACCTGGTGTATAGGCTTAGTGGTGCGTTCTGAAATCGCAAGAAAACAA CGTTCCATCTAATACGAATGTTAGAATGCTTGATGTTTTGTGGCCAATGG gtatacagtaaaacctctaattaacggacactctaaaaggcggacacctc tgattagcggacaatttcattttccccggcggtttcctagtcaaatcctc ataaaaaagtttctaaaaggcggacactcaattagcggaccctctgatta gcggacaaaatCTTTcacacgaaatggccaaaacccctattttagctctc caattagcggacattgaatatcaaacgggtcacagacgtccaaaatcgaa aaaatttcttttagatatttttatttcaagcacttattactcttattatt aaaattatttctaaaaatttccagttttctcttgacccattcaacgaatt taggtgggccGAAGAAATCACaaatcactggtacttcaaGCCCGTACCCA CCACCTCGATTTAACCTCTTGCCAGTCACTCGAGCTCTTCTATAGCCTAG TGTCCGCAGAtgagtactttagaccccaattttgtattttcgacaccctg ggatggcctaatttcaaaattggagctccaagataaaaagtttctaaaag gcggacacttctaattagcggacactaacccctttccccgatggtatccg ctaattagaggttccactgtacaCCTCTGTCTCACTGCACTGGATCAAAA GCTTTTCCCCGTactggggatgaaaatttcaatcgaaatgcaaaagagag agagagagagagagatatTATTCCCAGCTCAAAAAATCCAATCGGAACGG TTTagaattgtaatttttcatttagttTCAACGGAATTGTTGAGTATTTT TGCCAGTGGCGAAATTTTGGCCAGATTCTCAGTTGGGTtaggtcccaccg ggtctgtgatacgGGAATGTACTTTTTGCAATAATGTCTTTAATAAACTT TGGGTTGTAACatctttgaaatttaaatgaagGGGGAGTTCAGTTTACCG TTAATCTTTTTCTCTATCGCCTTACTTTCCAGCCAAATCTTTCAACGATA CAGTAGACGAGAATATGACAATTTGTGCTGGTGACGGAACAGCCAAAATT AGTCCTTGTAATACTGATAGTGGTGGTTCACTTGTTTGTCAAGCAAATGG TAAGACTTTTACATCCCTGTTTCGAACTTGTTTTAGCGAGaaataatttt ggcgaatttgacGAGTTTAGAGAAAATTTGCagtagttctcgccaaaatt aatcttTTTTGTAGTTTGACAAATTAACCCTTAAATTCAAAATAGctcaa ataaggcaaaataggaCAGATTTAGACTCTCacataatattaattttttt tcaaatcttaggAACTTGGTATGCTCAAGGGATTGTGTCAAGTGGGTATA AATGTGGAGGTCAAGACGCATACAGCTTATATACCagaatttcaaattat aacgaCTGGATtgcaaaagagatttttgaataTTATTCATCAAGTGGTAG AACTTTAAAACCTTGTGTATTGCTTATGATGATAATTTCTTATGcaactt ttgttttcttg

Coding sequence (CDS) from alignment at sc0000025_pilon:1775027..1776937+

>XLOC_037648 ID=XLOC_037648|Name=XLOC_037648|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1154bp|location=Sequence derived from alignment at sc0000025_pilon:1775027..1776937+ (Clytia hemisphaerica_ch_hm2_pilon)
GCGAACTCAATAATTTTGCTTGTAAATTATTAATCACACGTTCCTTTTTT
CAGCTATCCTAATATTAGAGGAAAAATTAAAACTGCCACAAGAGCATTCA
AACATTAGCAGGGTTTGTATGCCGGACACTCGTGCACCTATCTCGGACGA
TCAAACATGTTATATTGTGGGTTATGGATTTACGACTTTCAATGGAAACA
AATCTGATGATTTACGACATTCGAAGATTAATCTGGTACCAGTTGATACT
TGTAATCAAGGCGAACTCAATAATTTTGCTTGTAAATTATTAATCACACG
TTCCTTTTTTCAGCTATCCTAATATTAGAGGAAAAATTAAAACTGCCACA
AGAGCATTCAAACATTAGCAGGGTTTGTATGCCGGACACTCGTGCACCTA
TCTCGGACGATCAAACATGTTATATTGTGGGTTATGGATTTACGACTTTC
AATGGAAACAAATCTGATGATTTACGACATTCGAAGATTAATCTGGTACC
AGTTGATACTTGTAATCAAGCCAAATCTTTCAACGATACAGTAGACGAGA
ATATGACAATTTGTGCTGGTGACGGAACAGCCAAAATTAGTCCTTGTAAT
ACTGATAGTGGTGGTTCACTTGTTTGTCAAGCAAATGCCAAATCTTTCAA
CGATACAGTAGACGAGAATATGACAATTTGTGCTGGTGACGGAACAGCCA
AAATTAGTCCTTGTAATACTGATAGTGGTGGTTCACTTGTTTGTCAAGCA
AATGgAACTTGGTATGCTCAAGGGATTGTGTCAAGTGGGTATAAATGTGG
AGGTCAAGACGCATACAGCTTATATACCagaatttcaaattataacgaCT
GGATtgcaaaagagatttttgaataTTATTCATCAAGTGGTAGAACTTTA
AAACCTTGTGTATTGCTTATGATGATAATTTCTTATGcaacttttgtttt
cttggAACTTGGTATGCTCAAGGGATTGTGTCAAGTGGGTATAAATGTGG
AGGTCAAGACGCATACAGCTTATATACCagaatttcaaattataacgaCT
GGATtgcaaaagagatttttgaataTTATTCATCAAGTGGTAGAACTTTA
AAACCTTGTGTATTGCTTATGATGATAATTTCTTATGcaacttttgtttt
cttg
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_037648XLOC_037648-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025_pilongenomesc0000025_pilon:1775027..1776937 +
Properties
Property NameValue
Aaloc382-579:1714
Aaloc265-378:1385
Aaloc34-261:32
Aaloc1-30:1