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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000025_pilon:1531331..1535247+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037643 ID=XLOC_037643|Name=XLOC_037643|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3917bp|location=Sequence derived from alignment at sc0000025_pilon:1531331..1535247+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATCCTTGGTTGTGGTGTTAGCACTTTTACCAACAATCTTGGCTCA
TTCTTGGATGACTTGTCCACCGTAAGATATAGTTCACTTTTATAGATCCT
CATTTTTTCATAAACCCTCATTATTTTATAGACCCATAGACTAGAAGTTT
AACACTTATATAAGAATAacatatataagaacataaggctttaatgacaa
atatattaagaacaagttaggaacatttttaaggcttcaaaaactctAAC
ACTTACCAATTTTTTAGGAAACTGCACAAAAATACTgagggtgaaaataa
gaacatttttaacttAAATCTCAGCTCAGAACACCCAAAGGCTTAAAATC
GGGCAAAAGATATGAGAGAAGTATGATATATTGAGCCCGCTGAAGTCTAC
TTTTTCCGAGTTATCACAATGGTCTTCTGTATGAAGTTTGAATTCGTTTT
CTGAGTCCATGCCTTCTATATCAgtataataatttaaatttcGTTTTGTA
GGTCCATCAACCCTGCAACAGGTCGTGGAGGTATCCAAGGAGCGCAATGT
GAAGGCTGGGGAAGCAGTAAGTAACTATTAGAAAAGACTTACACCATTAG
ATACCCTCCGCTTCTCTCTAATTAGCGAGTTcgtgtattcgagataaatc
gaagctaggcttctgctcatcctctagcaaaaaaagtatatctatagatg
tctgcgattcagactaaatcGAAGCacacggtataaagcaaagttgacat
gtcacCAAAATCGCCGTTTACTCTaatcgacgacggtaaaaacaccaaaa
ttccttcgtctgtttaggtgagcaaaggcgatatagagagAGTGTTTTGC
GTCGAtgtcacttaccgtcgcccgtGATATcatccgatacataaactcgc
tattttttaacagttttttgcCGAATAAGTGGCGAGTTCAAGTGAggatt
caaaatttatgacgggGTGTCCCTTTATCTATATCTAACACAGCTAGACT
TTCTACAACCTTTCCCCTGAGGGTCCCCATACCCAAAAGAAGGAGTAATA
GCGAACGAAGTAACCAAAATAAACCTCTATAAGCATAATTTTACTTACAT
TCTCTCCTTCTTAACAGCTCCGGTGACAGAAGTTGAAGCTGGTGATCGTT
TGAAAGTCGGATGGGTATCCAACAACCACGGTGGTGGTTACGCAAGAATC
TCTTTAGTACAATGGGGTCAGAAAGGAAATGCACAAGCCTACAAAGATAA
CGTAATGAAATTTGCTTGTTATGGACATGACGAAAGACCAGGCAAATATC
AATATGGTGATTGCAAACATCCATGTAATGGAAGACCAGGTTGTGAATAC
CAAGCAAGTAAGAATGTAAATTTGATTATATCAAGGAGCGGTCAAGAAAA
CgatatcttttatttttttaggatttaaaaACTAACGTACTGTATAAAAT
TTCACCAACTTCAGGTAACTACTGCGACCGTAGTGCAATGGTAAAGCATC
CACCTACGATACGcagggttgtgggttcaacccccagccgggtcatacca
aagattcccaaaatggtactcgaTATCTCTCTGTTTGATGCTCAGCGatt
aagagaaagatcaagggtaaatggagcaatccagggagaaagagtggtgc
ctTCCTCTACCTTCGGggagatagctatcgaaagaagagcctccgggtcg
cctccgactgcggtcgcataCTTACCTACTTTGGGTGACACTTCTGAGCA
CTTCTTGCAACGGGTACAACTGAATTTAATGTACCTTGAAGATATTCTAA
GATATTTGGAAACTTAGCCTCGGGGCCATCAATAAATGCAACCGGTGTTG
CTTATAAGCTTCTCACCAGTAAAAGGCGCTTGTTGTTGTATAACCCACAG
ATATCTTAATAAAACACTAGATTGAGCTACTCCGTccctatttgaatcaa
aattatCCGCTATCTTTGATAAATAGACCATAGTTCGGTGCCGGTAGTTT
CTTTCACCAAATACAAAGTAGCTCtgtctagtgttttatataagatatca
atGGTATAATCAGACAACCATGAACACAATACAAAACTATATTGATCTCT
TTTCACTATAAGAAACTGGAGATGTTGAACGATACGACACCACTATTGGA
ATTCCAACCAACTTACCAGAAGGAGATTATTCACTTCAAGTCTCATTGTT
GGTCGGCAATGCAGTCCAACCATACAACAGTTGTGGCAAGTTAAGAATCA
AAGGTGGAAACCCAAGCTTCAGATGCAAATCTAGCAAAGTGCCTGTAACA
AATACTTGTTTAAGAGCTGGTGGCCCAGCAAGATCAAGAGTCTCTGATGg
tgagaaaaaacatttttaaggaCAGaaaaaaaCCTAAGATACAGCGGAGT
CTCTTAAACTTATACACCCATGGGTTACACGAATTTTTGTCGaaatatgg
agtaaggtttataaggcattgttaactgaaaggacaatagaatttgttcg
agttaaagaaacattcgagttatagaggttcgggTTAAAGAGAATCCACT
GTATTCAACATTATAGCAAGAGTTTATTGAAAACAACACAAACGTGATGC
GCTTTTAAGTTATCTAATATTGACAGGAAAAGAAAATTACCTCCAATTTT
TACCCGaaaaaaaaCGGGATTTAGTTTAGAAGAAAATAAGGTTTCTGAAA
TTTACAGCGAAAGTTCAAAAGGGTTAATCTCAAATATTAATATTTGATAT
CTTGATATCCAGGGATTCAATGAATGGAATTTCGGGTAAAATCCAAAACG
TCAAACTACctcaaatgacaaaaaaatgaaacatattgCTTATGTAATGA
GAATTCTGGtcacaaaatcaattttaaggtcCTAATAATTAATTCAATTG
CTTCATTTGTTTTAATAGGAACAAAACGTGGAGATTTTTGTTATGGTCTT
GATGGCTCAATTGGCACCGTTGATGATAACATGTCGGACGTCCCCGTTAA
CGTGGAATGTGACCCCCGTGTTACGTGTGGTCAATCAGTTGACCGTGGGC
TTTGTGAACGTGAATTCCCAAACATGGCTCGAATCTTGGTGAGCATTAGT
TTGATTTCAAATATTCTTTCTTCTAGAAACGAAAGAAGGTTTATAGAAAA
GATGTGAGACGAAATCAATAGCATATCGTAATcggaatctaaaaatagac
attgatttttctgtttgaccgaaattcaatcccgtcAACCTTtgcgcaaa
ttacactcaattacaaagaaaaagtaataactttcacgacttttgaatta
aaacaaaaaaggattgtgggattgaatttcggtcaaatgagagcAGAGAA
GTAATAATCGTGACGTTTGCACGACGAAGCGCTATTCAAAAACATACAAT
TAGTAcacttttttatcagaacaaactatatactataagtcttcgatggc
caaaatgttaagaagatGTTAAAGAACACATTTTTAGGCTTCGTGGGCTC
Taaaaaacgtgatttcttaaaaaaatggataaaaatactcaaaaaatggc
gaaaataagaacatgttaagaatatttttaggcttaaaactcgaaaagtt
aagaacatccaaaggcttcaaaaactttggatgttcttataaaaaacgtg
tactaaaaTACACGATACATTATACACGTTACATCTACACTAGCCCTTAT
CGGCATTATATTTTGAGCGATTAAAATGGCCGATGAGGTATGTAAGCTTT
CAAAGCGTTGTGATGagataaataattttttgagaaaaatattttagttg
aaagtttctAATAAATTCATAGAATAATTAATATTTTGTCACTTTCTATT
CCAGACACCAAGAAGCAACCCACGCCAACCAAACTGCAGACCATACAACG
TTCTCCCAGTCATGtaa Coding sequence (CDS) from alignment at sc0000025_pilon:1531331..1535247+ >XLOC_037643 ID=XLOC_037643|Name=XLOC_037643|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1692bp|location=Sequence derived from alignment at sc0000025_pilon:1531331..1535247+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATCCTTGGTTGTGGTGTTAGCACTTTTACCAACAATCTTGGCTCA
TTCTTGGATGACTTGTCCACCATGGTATCCTTGGTTGTGGTGTTAGCACT
TTTACCAACAATCTTGGCTCATTCTTGGATGACTTGTCCACCGTCCATCA
ACCCTGCAACAGGTCGTGGAGGTATCCAAGGAGCGCAATGTGAAGGCTGG
GGAAGCAGTCCATCAACCCTGCAACAGGTCGTGGAGGTATCCAAGGAGCG
CAATGTGAAGGCTGGGGAAGCACTCCGGTGACAGAAGTTGAAGCTGGTGA
TCGTTTGAAAGTCGGATGGGTATCCAACAACCACGGTGGTGGTTACGCAA
GAATCTCTTTAGTACAATGGGGTCAGAAAGGAAATGCACAAGCCTACAAA
GATAACGTAATGAAATTTGCTTGTTATGGACATGACGAAAGACCAGGCAA
ATATCAATATGGTGATTGCAAACATCCATGTAATGGAAGACCAGGTTGTG
AATACCAAGCAACTCCGGTGACAGAAGTTGAAGCTGGTGATCGTTTGAAA
GTCGGATGGGTATCCAACAACCACGGTGGTGGTTACGCAAGAATCTCTTT
AGTACAATGGGGTCAGAAAGGAAATGCACAAGCCTACAAAGATAACGTAA
TGAAATTTGCTTGTTATGGACATGACGAAAGACCAGGCAAATATCAATAT
GGTGATTGCAAACATCCATGTAATGGAAGACCAGGTTGTGAATACCAAGC
AAAAACTGGAGATGTTGAACGATACGACACCACTATTGGAATTCCAACCA
ACTTACCAGAAGGAGATTATTCACTTCAAGTCTCATTGTTGGTCGGCAAT
GCAGTCCAACCATACAACAGTTGTGGCAAGTTAAGAATCAAAGGTGGAAA
CCCAAGCTTCAGATGCAAATCTAGCAAAGTGCCTGTAACAAATACTTGTT
TAAGAGCTGGTGGCCCAGCAAGATCAAGAGTCTCTGATGAAACTGGAGAT
GTTGAACGATACGACACCACTATTGGAATTCCAACCAACTTACCAGAAGG
AGATTATTCACTTCAAGTCTCATTGTTGGTCGGCAATGCAGTCCAACCAT
ACAACAGTTGTGGCAAGTTAAGAATCAAAGGTGGAAACCCAAGCTTCAGA
TGCAAATCTAGCAAAGTGCCTGTAACAAATACTTGTTTAAGAGCTGGTGG
CCCAGCAAGATCAAGAGTCTCTGATGGAACAAAACGTGGAGATTTTTGTT
ATGGTCTTGATGGCTCAATTGGCACCGTTGATGATAACATGTCGGACGTC
CCCGTTAACGTGGAATGTGACCCCCGTGTTACGTGTGGTCAATCAGTTGA
CCGTGGGCTTTGTGAACGTGAATTCCCAAACATGGCTCGAATCTTGGAAC
AAAACGTGGAGATTTTTGTTATGGTCTTGATGGCTCAATTGGCACCGTTG
ATGATAACATGTCGGACGTCCCCGTTAACGTGGAATGTGACCCCCGTGTT
ACGTGTGGTCAATCAGTTGACCGTGGGCTTTGTGAACGTGAATTCCCAAA
CATGGCTCGAATCTTGACACCAAGAAGCAACCCACGCCAACCAAACTGCA
GACCATACAACGTTCTCCCAGTCATGtaaACACCAAGAAGCAACCCACGC
CAACCAAACTGCAGACCATACAACGTTCTCCCAGTCATGtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025_pilon | genome | sc0000025_pilon:1531331..1535247 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 784-846:3855 |
| Aaloc | 616-783:2921 |
| Aaloc | 379-612:2115 |
| Aaloc | 139-375:1120 |
| Aaloc | 73-135:503 |
| Aaloc | 1-69:1 |
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