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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000025_pilon:1517763..1521345+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037641 ID=XLOC_037641|Name=XLOC_037641|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3583bp|location=Sequence derived from alignment at sc0000025_pilon:1517763..1521345+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAATACATGCGAAAGTCGTTTCAAGTTAGTAAAGGTATTACGTAA
ATTGAATACCGAGTACCAAAGAACAAGAGATATTTTATCAAGCAAAGCTT
TAGAAGTGGTAAGTGAAATACCATTTAGTAGTCTTCAAATGCCGTGGTAA
CTTCTTGTTAGATTTTCTACAAAATCAATCGATTCACTTAAAGGAAATCA
TTTAACGCATCATACCTACAATTTGCTTACACGgtgttttaaaaaaagaa
gaactcTTCCTCCCGTGCCAAGCGAACACAAATTGCTTTGTCAATTCTGC
TTCATCAGCATAAAGGCGAGCCCCTTGTTATATCGTAAAAAAGAATAAAC
TTCAAATAAGTGAATTGATACCGAAGCATGGTGGGTTCGGGTAAATGGAG
TCCGTTGACTTGCCATTGACCTTTttaaatatttggaaaaatctCTAAAA
GGTCGCAAATTCACTCAGCTTTCAAAAGTATATCTGAAGGACTGACTTTT
CGGTACCTTTTACTACTTTTCATCAGGGAGCATTTGTTGAAAACTATATG
ACAGGGGTCCATCcctttttgatagaatttcatATCTAACAGGGTCtttt
ttttCGATTCTTACCCTCATCTAGATTTGTGACTTCTAAAAAACCATAga
cttctgctcatcctctagtgAAAAGATTTCTTATATAGGAAGTAAATCTA
GAGGTCTGTGATTTAGACTCCAAAAACCATTGTGAGGGGTTTGTCCTGTT
AGTCGGCAAGGGTAGCGCATGCTTTTACTGCTGTAAGCGATTCCTGATGT
TAGCTTCTCTAAAAAAGAGGCTTGGTTTAAATTATAACATGGTTAAAata
ctaaaaactaattacttGTTTCAAAAGTTCCACGCTGTACAATTTAGGAC
CATCTTAGATTGACCCATTATAACTAATTTGATGTAATCATGCGGCATCA
TAAGTAATATATATCTATCTAATTAGTCTAGAAACATGGCTCCTTCTCtc
tttctaaactttttctATTTATATCTTTTACCGTTGGAGACAAGGCAGAG
AGAgttattttttatgctttataGCTTTTCTTCTTTTAACTCAGTGCAAG
ATTCTCATAATCCAACAAGCTTCTACATACTACATACACTTTCACATAAA
TAAGCAATTCTAGCATATTACCCATCAAActataaacctttttttttttt
taaagtggtcCCTCTGTGTTGGAGCTATCAATCAATcttgtacccagagc
cacttgctctactttttggtttttctaataAATGTTGGTAAAATCCTTTC
GGACTCAGAGTTAAAaatctacccttcgaacctactttagagcacttaca
aatcgattgtggtttcaaaacaccccggtgaatttcccttttgtgccaaa
tattttgtccctgattgtggagtttttacaagctcttatgtgatttggtt
ggtcgttaagatgtaataaatacaattttattacattttctaaagaacgc
gtcatctatattacttcaaatgaccaattagtgaagtatcttataaaaac
tccagctcgtCGCTTTTTTCTCTACAGGCAATTCTTGGTGATGGCAAGAA
GATCGATAAACGAATGGCATGTTTAAAGACGATCGAAATACCAACTGAAG
AAGACATTTTCACCGAAAAACCACCCGCTAAATTGATCGGGGTAAGTTTT
TATCCTCGTAAACAGGCTTTTTAGTGCCGTTAACTAGCGTCGTTGTATCG
TTACTTTGACAATCTTACAAAAGTTTAGACTGAATTAATAAAGTATAGCC
GAAAAGTAGATTGTAAATTAAAGTACACTCCTTTAGAAGATATTTGCTCT
TCCAAAAGGGTGTTTTAAATTACATCGGAATAATCTTTTTCAAGAATACG
AAAATGATTGCCAAATTCATATAAGAAATCTGTTAAAAAATGGTGTATCC
AGTCAGACGATAGACTACtgctggctgaactttgctttttggtgattttt
gatGAGGCTGAGTTCACCGCCattcagtctatcaaaaagctttaattgga
ccccgggctagtcaaaaaaaatgaaaacatagtttATAATAAGGAATATT
ATCTAGGCCACGTGGATATAAAAATACTTTAACAGCAATATTGATGGATA
TCTTTCCTATCAGCAAAATGATAATCACCCAATTTCCGCTCTCGTGTAGC
GTGCAGTATAAAAACAATTTCCGGAGGGAGCTTTCCCTTGCTTTTTCTTC
ACTGAGggagaaaaaaaactgaaaaaaataatatgctGAGTTTGTTACTT
TCGTTAAACACAGGAAATCGGTGATCGTAATAACTGCCAAACATCCTGCT
ATCCTTTTTGGCATTTCggttttaagcttttttctgaTTCGGAACATTTT
TCCTCAATGGGGGATAAGAATCcctattgaaatcccgatggggataaaaa
ttctattgtttaaaagttaaaaaatccagttggAATGGTTTcggattttt
aaacatttaattccaagtggggataaaatataagtcaatttcccagtggg
gctaaaattccagggtattttcctatcGGGTACGAAATTTTTActggggt
cccagtggatctgtgacacaggggtgtatgagACAAGCATGAactaataa
ttatttttcttttagaaacaTTACCTACGATTAAACTTCAATAAGATAGT
ACTGGAAGTTTTCAATAAAGAATTACAGAACGGATTTCCACTCTTGAATA
CTCTACCCACGgaagatggaaaaatagaaaagctgagagaaattcaaaat
gaaatccagaagagattgaaaaaCCAGACCAGCAATATTGAGAAACAACT
TGAGGTTGGTACTTTATTACTCATtctaaaaaatggttttttcctcaatt
tgattttgagcACATATCATTAAAATGCATCCTTTTTAGCCTAAACCGTG
TAACTAAGTCTCAAAGGACAGCCAGCCTATTCCAAGCCATTAATTACAAa
ggaacacccctgtctcacagccccagtggaattTTTTACCTCATTGtgga
taaaaactcctattgaaatcccaatggggatagaaattctattgtttcaa
ggttaaaaaatccaatgggggatggatttggagtgcaatttttaaacagt
CCAGTGGGACTAAAATTCAAGAgtattttcccaccagggaagaaattttt
gttaaattttccagtggattGGGGTTCCCAACGGGTCTGAGACACAGGGG
TAGGGGTGTAAAGGATAAACAACCGAGTATTTGGAAAGTTATACTTTAGA
AATTGTATATTTATGGTCCTAAAAATCGttatttccttcatttttttagt
TATTCAAGGATGCTGCCAAAATTAATGGGCTTGATATTGCATTGACTGAA
CAACAagcttttaaactgaaaatcaaactacaattcattgaaatgaaaaa
tgaaaaggaatATTCAGAATGTTTTAACGAATTTGCAAGATTACGACAAT
TCTTCAATAATTTACGATACTTTTACGAAGATTTTATTGCGGATGGCAAA
GTTCGTATCAGACAATGCCGGTTATTTGGTTGA Coding sequence (CDS) from alignment at sc0000025_pilon:1517763..1521345+ >XLOC_037641 ID=XLOC_037641|Name=XLOC_037641|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1290bp|location=Sequence derived from alignment at sc0000025_pilon:1517763..1521345+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAATACATGCGAAAGTCGTTTCAAGTTAGTAAAGGTATTACGTAA
ATTGAATACCGAGTACCAAAGAACAAGAGATATTTTATCAAGCAAAGCTT
TAGAAGTGATGGTCAATACATGCGAAAGTCGTTTCAAGTTAGTAAAGGTA
TTACGTAAATTGAATACCGAGTACCAAAGAACAAGAGATATTTTATCAAG
CAAAGCTTTAGAAGTGGCAATTCTTGGTGATGGCAAGAAGATCGATAAAC
GAATGGCATGTTTAAAGACGATCGAAATACCAACTGAAGAAGACATTTTC
ACCGAAAAACCACCCGCTAAATTGATCGGGGCAATTCTTGGTGATGGCAA
GAAGATCGATAAACGAATGGCATGTTTAAAGACGATCGAAATACCAACTG
AAGAAGACATTTTCACCGAAAAACCACCCGCTAAATTGATCGGGaaacaT
TACCTACGATTAAACTTCAATAAGATAGTACTGGAAGTTTTCAATAAAGA
ATTACAGAACGGATTTCCACTCTTGAATACTCTACCCACGgaagatggaa
aaatagaaaagctgagagaaattcaaaatgaaatccagaagagattgaaa
aaCCAGACCAGCAATATTGAGAAACAACTTGAGaaacaTTACCTACGATT
AAACTTCAATAAGATAGTACTGGAAGTTTTCAATAAAGAATTACAGAACG
GATTTCCACTCTTGAATACTCTACCCACGgaagatggaaaaatagaaaag
ctgagagaaattcaaaatgaaatccagaagagattgaaaaaCCAGACCAG
CAATATTGAGAAACAACTTGAGtTATTCAAGGATGCTGCCAAAATTAATG
GGCTTGATATTGCATTGACTGAACAACAagcttttaaactgaaaatcaaa
ctacaattcattgaaatgaaaaatgaaaaggaatATTCAGAATGTTTTAA
CGAATTTGCAAGATTACGACAATTCTTCAATAATTTACGATACTTTTACG
AAGATTTTATTGCGGATGGCAAAGTTCGTATCAGACAATGCCGGTTATTT
GGTTGAtTATTCAAGGATGCTGCCAAAATTAATGGGCTTGATATTGCATT
GACTGAACAACAagcttttaaactgaaaatcaaactacaattcattgaaa
tgaaaaatgaaaaggaatATTCAGAATGTTTTAACGAATTTGCAAGATTA
CGACAATTCTTCAATAATTTACGATACTTTTACGAAGATTTTATTGCGGA
TGGCAAAGTTCGTATCAGACAATGCCGGTTATTTGGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025_pilon | genome | sc0000025_pilon:1517763..1521345 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 412-645:3350 |
| Aaloc | 223-411:2666 |
| Aaloc | 109-222:1578 |
| Aaloc | 1-108:1 |
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