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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000025_pilon:1121180..1124506+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037623 ID=XLOC_037623|Name=XLOC_037623|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3327bp|location=Sequence derived from alignment at sc0000025_pilon:1121180..1124506+ (Clytia hemisphaerica_ch_hm2_pilon)
AAACCAGAGCGTTTGGAAGATGTTGCAAAGGACGAGAAATTGATCGAAAg
cgatgaagaagaagatgttATGTTGAGCAATGACAAAGAAGAGGCGGATA
CAGAAGATGAACCAAAAAGCGAAGAGTTAGATGAAAAGAAAGAGGACGAA
TTGAGTGAGGATGTGGTTGAAAAAGAATCTGAAGAAGATGAGCTGGCAGA
AGAATCAGAGGAGAATAAAGATGAACTGATTCAAAAAGGTAtggaaaatc
ataaaaaaaagtctattgaGGTTTTACGTGTTTCTAACCtgaaaagattt
gtttttatacaacggatttctataattcgattctttctataattcgaact
aagcCTCGTagaatactctctgtaattcgagtcTTTCTGTTATTCGACCA
TAGTAGACTTCTTGTTCGAGTTCAAATTAACGAGAGTTAACTGTAATAGT
GAAAAACGCGAAACTTGCAGTTAATTATTGGCAACGCTAAAATTATGGTA
CGGGAATTGTCCTGCAGTAATAGTCAAACAAAgcaaatactttaaatttc
agctgatgCTCCAACTCCAAACGAagaaaagaatgaagaagaCGAAATCG
TGGAGGACGAACATAAGGACgaagagaagaggaagccagaaaatgacgaa
aagaagatgaagaaagatgaaaaaCTTATTCACAACGATCCACAAGTTGG
TGAGTTGAGAGCCTTACTGGTATTTTTTGGGTCGACAAAATTCATTGCGA
GCTAATAGGTGTTCGGTCATAAACAATAGAGCTCAGTATGCAAAAATACT
GATTATCGGAGCTCTGAGGAATAATCAGGTTCCTCATGCTCGTTCCTGAT
GCTCAAGCATTGATGCCTTTCATAGTTTTACTCGcgaaaaaagactttca
aaaggaTATTCTCCTATTTCCTTGTAGGTTATACActtcgaaaaaatttc
attcaCGACGCTTTCGAGACTTGGTCACCAGATTATAGTGTAGGGTTTCA
AATCAAACCACTCTACATCGTCAACCATTGGACCAGTATCATACATTTTA
CAACTGGTGGGGACTCGGGAGCTCACGGCCGTAGAGTACCAGCGGTTTTT
ATCGAGCCACATACCTCAAAACTTCATATTTGTACTAGTTTACATAACAG
TAACAACTGGTGTGTCCATAGTGCTGCCTTGCCTCTTCACAAATATACTT
ATGTCTCGATTAGCCAATCTCCCAATGGGGCGAAATATATGTATCGAGTT
TGGGTGAATGGCAAACAATTAACAAACGTAGAGAACAAGACTCCGAGATA
TTTCCAGAACATTAAAGTGTACAAAGCAGATAGATGGTACAATGCAGCGC
CTGCCAATATCAGAAATCTTTACATCAGTGGTAACCAACAGTACGGTAAG
GATGGATTCCTTTGTAAGGGAGGACCAAGCTATATTTATCCGCCATcctt
gatcggagttttttttgaattggtacccgagaagaagtcattgcaatgtt
aaaaatcaccaaaagcatttgaaagaaagtagatctagcgctctcgatgc
atttacaccgctaatGAGTAGTgctgccattagggtaccacttttcaaaa
aactccgatcaaagattttgcttggccgggattcagaaacttggtccagg
gatatataaaggtcagtggggaGGACCCATTACTATTCAAGGTTATGAAT
TGGACTAAGCCAAATGCTTTAATTTTCTGTCACGGCCACTACTCGGCTCA
TGGGAGAAGGAGTATTACAAACATATTTGAGAAACTAAAATATAGAATTT
TCAACAAGCTTGTTATTAAGGTTGCACAACCTTTGGCTTCATTAATGCTT
AAACTTAACTTAATAATAAATTTCCCTTTTAGTCCGCCATCCCATCCGAA
AAAGCACTCTCATCAAAACATTTCCAACCTACTTTTCCGAGTACGAAGTA
TCTTTCCGTATCCGCCCCACCGGAAAAGTCAGCACATGGTCCAATATACT
TCACGTTACAAAAGGTGGGGATCACGGAGCACACGGAGACCGAATTCCCG
GGGTCTGGTTCTGGCCAAACACCAATAAACTACTCATCGCAACATCACGT
GGTAGCAACAAGAATTATTATTGGACCAGCCCAGAGTTACCGACAATCAA
AGACACTGAAGTCAATATCAAGCAGAAAGTGGTCGGTTGCTGTACCCATT
ACTATACAATTACAATAGATAAAAAAGTAGTACTGAACGTTGTCAACAGC
AACCCAAGAACTTTCCACAACGTGAGAGTTTACCAGGGCGATCCCTGGTA
TGCACCAGCTAAAGCGTACATCAGTAACCTTCAAGTCACAACAACCTCAG
GAGGTTAGAAAATTTCGAGTTCACACTTtcattattttctgaaaaaaaag
aagcctttcaagtgttctgatgcaaattcgatttttcccTACTGTGCTAC
AAGAGTCttgaaagtttaaagtgactaaagttaaaaatcaaaaacctggg
ccccaaaaacatcaaaattcgcAAAGTAgaatcatagatttataaagctc
gAAGGGATAGatgctcttccaagcaaaaagtgaatatcgcaaaaaaatat
tgctgctattgttttcgaaaacccgcgaagattctgattggtcaagcgct
ggaattctattgtaatgtgacgtgacttaggtaggatttcctacctaacc
tcggcacacttttcagcaaaagcacgatatctagccaTTCGGGCCTTACA
AATCTACGAgtagaatagaccttttgcgTCGAAAAAGCCTTGACGCCTAG
CGTAGACTATAAAAAATCCATTTCTTCTCAATGTTTCAGGTGGTTACAAA
CTTTCGAAGGGCAAACTCCTCCGATTCATCCCGCGCATTGAGAAGCAATG
GTATATGTCTTTCGACGTCAAACACTTGGGAAGCGTCAAGAACCACTGGA
CCAACATTTTACACTCCACTATCGGCGGCAACGACGGAACATTCGGTTAC
CGTATTCCAGGAATCTGGTTCGTCCCAAACACCCGGAAGCTCCATATCTG
CCACGCCATCAACAATGACCCTAGTTATTGTTTCAACACACCAAACCATG
TTCCGCTCAACAAATACACTAATGTTCAGATCGCCCAAATCTACGAGACC
GATTATAAGAGATATCGATACACCATCTTAATTAACAGAATACAGAGGTT
CACCATCATCAACAACACACCTCGCGTTTTCCATGACGTCAGATTGTGGG
GTTCAGACCCCTGGTTTAACGCAGCCAACGCGTCCATCAAGAATGTTGTT
TTCAGAAGTATTCCACACAAAAAATGA Coding sequence (CDS) from alignment at sc0000025_pilon:1121180..1124506+ >XLOC_037623 ID=XLOC_037623|Name=XLOC_037623|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3624bp|location=Sequence derived from alignment at sc0000025_pilon:1121180..1124506+ (Clytia hemisphaerica_ch_hm2_pilon)
AAACCAGAGCGTTTGGAAGATGTTGCAAAGGACGAGAAATTGATCGAAAg
cgatgaagaagaagatgttATGTTGAGCAATGACAAAGAAGAGGCGGATA
CAGAAGATGAACCAAAAAGCGAAGAGTTAGATGAAAAGAAAGAGGACGAA
TTGAGTGAGGATGTGGTTGAAAAAGAATCTGAAGAAGATGAGCTGGCAGA
AGAATCAGAGGAGAATAAAGATGAACTGATTCAAAAAGAAACCAGAGCGT
TTGGAAGATGTTGCAAAGGACGAGAAATTGATCGAAAgcgatgaagaaga
agatgttATGTTGAGCAATGACAAAGAAGAGGCGGATACAGAAGATGAAC
CAAAAAGCGAAGAGTTAGATGAAAAGAAAGAGGACGAATTGAGTGAGGAT
GTGGTTGAAAAAGAATCTGAAGAAGATGAGCTGGCAGAAGAATCAGAGGA
GAATAAAGATGAACTGATTCAAAAAGctgatgCTCCAACTCCAAACGAag
aaaagaatgaagaagaCGAAATCGTGGAGGACGAACATAAGGACgaagag
aagaggaagccagaaaatgacgaaaagaagatgaagaaagatgaaaaaCT
TATTCACAACGATCCACAAGTTGctgatgCTCCAACTCCAAACGAagaaa
agaatgaagaagaCGAAATCGTGGAGGACGAACATAAGGACgaagagaag
aggaagccagaaaatgacgaaaagaagatgaagaaagatgaaaaaCTTAT
TCACAACGATCCACAAGTTGGTTATACActtcgaaaaaatttcattcaCG
ACGCTTTCGAGACTTGGTCACCAGATTATAGTGTAGGGTTTCAAATCAAA
CCACTCTACATCGTCAACCATTGGACCAGTATCATACATTTTACAACTGG
TGGGGACTCGGGAGCTCACGGCCGTAGAGTACCAGCGGTTTTTATCGAGC
CACATACCTCAAAACTTCATATTTGTACTAGTTTACATAACAGTAACAAC
TGGTGTGTCCATAGTGCTGCCTTGCCTCTTCACAAATATACTTATGTCTC
GATTAGCCAATCTCCCAATGGGGCGAAATATATGTATCGAGTTTGGGTGA
ATGGCAAACAATTAACAAACGTAGAGAACAAGACTCCGAGATATTTCCAG
AACATTAAAGTGTACAAAGCAGATAGATGGTACAATGCAGCGCCTGCCAA
TATCAGAAATCTTTACATCAGTGGTAACCAACAGTACGGTTATACActtc
gaaaaaatttcattcaCGACGCTTTCGAGACTTGGTCACCAGATTATAGT
GTAGGGTTTCAAATCAAACCACTCTACATCGTCAACCATTGGACCAGTAT
CATACATTTTACAACTGGTGGGGACTCGGGAGCTCACGGCCGTAGAGTAC
CAGCGGTTTTTATCGAGCCACATACCTCAAAACTTCATATTTGTACTAGT
TTACATAACAGTAACAACTGGTGTGTCCATAGTGCTGCCTTGCCTCTTCA
CAAATATACTTATGTCTCGATTAGCCAATCTCCCAATGGGGCGAAATATA
TGTATCGAGTTTGGGTGAATGGCAAACAATTAACAAACGTAGAGAACAAG
ACTCCGAGATATTTCCAGAACATTAAAGTGTACAAAGCAGATAGATGGTA
CAATGCAGCGCCTGCCAATATCAGAAATCTTTACATCAGTGGTAACCAAC
AGTACGTCCGCCATCCCATCCGAAAAAGCACTCTCATCAAAACATTTCCA
ACCTACTTTTCCGAGTACGAAGTATCTTTCCGTATCCGCCCCACCGGAAA
AGTCAGCACATGGTCCAATATACTTCACGTTACAAAAGGTGGGGATCACG
GAGCACACGGAGACCGAATTCCCGGGGTCTGGTTCTGGCCAAACACCAAT
AAACTACTCATCGCAACATCACGTGGTAGCAACAAGAATTATTATTGGAC
CAGCCCAGAGTTACCGACAATCAAAGACACTGAAGTCAATATCAAGCAGA
AAGTGGTCGGTTGCTGTACCCATTACTATACAATTACAATAGATAAAAAA
GTAGTACTGAACGTTGTCAACAGCAACCCAAGAACTTTCCACAACGTGAG
AGTTTACCAGGGCGATCCCTGGTATGCACCAGCTAAAGCGTACATCAGTA
ACCTTCAAGTCACAACAACCTCAGGAGTCCGCCATCCCATCCGAAAAAGC
ACTCTCATCAAAACATTTCCAACCTACTTTTCCGAGTACGAAGTATCTTT
CCGTATCCGCCCCACCGGAAAAGTCAGCACATGGTCCAATATACTTCACG
TTACAAAAGGTGGGGATCACGGAGCACACGGAGACCGAATTCCCGGGGTC
TGGTTCTGGCCAAACACCAATAAACTACTCATCGCAACATCACGTGGTAG
CAACAAGAATTATTATTGGACCAGCCCAGAGTTACCGACAATCAAAGACA
CTGAAGTCAATATCAAGCAGAAAGTGGTCGGTTGCTGTACCCATTACTAT
ACAATTACAATAGATAAAAAAGTAGTACTGAACGTTGTCAACAGCAACCC
AAGAACTTTCCACAACGTGAGAGTTTACCAGGGCGATCCCTGGTATGCAC
CAGCTAAAGCGTACATCAGTAACCTTCAAGTCACAACAACCTCAGGAGGT
GGTTACAAACTTTCGAAGGGCAAACTCCTCCGATTCATCCCGCGCATTGA
GAAGCAATGGTATATGTCTTTCGACGTCAAACACTTGGGAAGCGTCAAGA
ACCACTGGACCAACATTTTACACTCCACTATCGGCGGCAACGACGGAACA
TTCGGTTACCGTATTCCAGGAATCTGGTTCGTCCCAAACACCCGGAAGCT
CCATATCTGCCACGCCATCAACAATGACCCTAGTTATTGTTTCAACACAC
CAAACCATGTTCCGCTCAACAAATACACTAATGTTCAGATCGCCCAAATC
TACGAGACCGATTATAAGAGATATCGATACACCATCTTAATTAACAGAAT
ACAGAGGTTCACCATCATCAACAACACACCTCGCGTTTTCCATGACGTCA
GATTGTGGGGTTCAGACCCCTGGTTTAACGCAGCCAACGCGTCCATCAAG
AATGTTGTTTTCAGAAGTATTCCACACAAAAAATGAGTGGTTACAAACTT
TCGAAGGGCAAACTCCTCCGATTCATCCCGCGCATTGAGAAGCAATGGTA
TATGTCTTTCGACGTCAAACACTTGGGAAGCGTCAAGAACCACTGGACCA
ACATTTTACACTCCACTATCGGCGGCAACGACGGAACATTCGGTTACCGT
ATTCCAGGAATCTGGTTCGTCCCAAACACCCGGAAGCTCCATATCTGCCA
CGCCATCAACAATGACCCTAGTTATTGTTTCAACACACCAAACCATGTTC
CGCTCAACAAATACACTAATGTTCAGATCGCCCAAATCTACGAGACCGAT
TATAAGAGATATCGATACACCATCTTAATTAACAGAATACAGAGGTTCAC
CATCATCAACAACACACCTCGCGTTTTCCATGACGTCAGATTGTGGGGTT
CAGACCCCTGGTTTAACGCAGCCAACGCGTCCATCAAGAATGTTGTTTTC
AGAAGTATTCCACACAAAAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025_pilon | genome | sc0000025_pilon:1121180..1124506 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1327-1812:2842 |
| Aaloc | 856-1323:1885 |
| Aaloc | 388-852:930 |
| Aaloc | 241-384:555 |
| Aaloc | 1-237:1 |
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