XLOC_037593 (mRNA) -

Overview
NameXLOC_037593
Unique NameXLOC_037593
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000030_pilon:971052..971885-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037593 ID=XLOC_037593|Name=XLOC_037593|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=834bp|location=Sequence derived from alignment at sc0000030_pilon:971052..971885- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGGAGGAGATAAAAAATCTACATCATCAAACAAAAACCTCAGATC ATCAACCAAACAATCATCAAAGAACCAAGAACCGACTGAACTCATACCTG ACCTCTCAACATCAATCAACTCTACACCAATGTCACCTGCAGTGGTTTTA TCCAATAGTCCCAAGGAACTTAGGGCAATTATTGCTGCGCTACAAACAAA AGTAGACTACTTATCTGACAAAGTTGACATTCTTGGTAAGGAGGTTATAT CTTTGAAGAAAGACTTGACCATCAATCAATCTGCCCTGGCTATCTCAAAG ATAACATCGTCACACCTGAGAAATGAATTGGACCGACAGGAACAATACTC GAGAAGGAATTGTATTGTGATGGACGGTGTGGCTGCTACACAGAAAGATA CGCCTGACGAGCAGACAACTAAAGCCAAGAAAATTCTAATAGAATCTTTT CCAGATGATGACGAAATCATAACTGGGTTCGACAAAGCCCATCCAATTGG GCCCATTCTAAATGGCAAACAATCATACATTATGAGGTTTGACAAACATT CGGTGGTCTCCAGAATCTACAAAAACCGCAATGATCTCAAAAAAAGAGGA ATCACTGCACGTCCATCGCTAACCAAAACCCGATCTTCAACCTTACGACT GTGTCAACATTCTGCTGAAAGTATCAGCTCGATTAAATTTGTCTTTAGTG ACATTGAGGGTAACCTCAAGGTCTGCTTCTCCAACAGAAACCTCAGAGGC AGAAATGTACATGCATTCGAGTCTGAGGACGACTTCAGACACCTTATCCT CAATCATGAACATGCAACTGATTTCCCTCAAGAC

Coding sequence (CDS) from alignment at sc0000030_pilon:971052..971885-

>XLOC_037593 ID=XLOC_037593|Name=XLOC_037593|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1668bp|location=Sequence derived from alignment at sc0000030_pilon:971052..971885- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGGAGGAGATAAAAAATCTACATCATCAAACAAAAACCTCAGATC
ATCAACCAAACAATCATCAAAGAACCAAGAACCGACTGAACTCATACCTG
ACCTCTCAACATCAATCAACTCTACACCAATGTCACCTGCAGTGGTTTTA
TCCAATAGTCCCAAGGAACTTAGGGCAATTATTGCTGCGCTACAAACAAA
AGTAGACTACTTATCTGACAAAGTTGACATTCTTGGTAAGGAGGTTATAT
CTTTGAAGAAAGACTTGACCATCAATCAATCTGCCCTGGCTATCTCAAAG
ATAACATCGTCACACCTGAGAAATGAATTGGACCGACAGGAACAATACTC
GAGAAGGAATTGTATTGTGATGGACGGTGTGGCTGCTACACAGAAAGATA
CGCCTGACGAGCAGACAACTAAAGCCAAGAAAATTCTAATAGAATCTTTT
CCAGATGATGACGAAATCATAACTGGGTTCGACAAAGCCCATCCAATTGG
GCCCATTCTAAATGGCAAACAATCATACATTATGAGGTTTGACAAACATT
CGGTGGTCTCCAGAATCTACAAAAACCGCAATGATCTCAAAAAAAGAGGA
ATCACTGCACGTCCATCGCTAACCAAAACCCGATCTTCAACCTTACGACT
GTGTCAACATTCTGCTGAAAGTATCAGCTCGATTAAATTTGTCTTTAGTG
ACATTGAGGGTAACCTCAAGGTCTGCTTCTCCAACAGAAACCTCAGAGGC
AGAAATGTACATGCATTCGAGTCTGAGGACGACTTCAGACACCTTATCCT
CAATCATGAACATGCAACTGATTTCCCTCAAGACATGGCTGGAGGAGATA
AAAAATCTACATCATCAAACAAAAACCTCAGATCATCAACCAAACAATCA
TCAAAGAACCAAGAACCGACTGAACTCATACCTGACCTCTCAACATCAAT
CAACTCTACACCAATGTCACCTGCAGTGGTTTTATCCAATAGTCCCAAGG
AACTTAGGGCAATTATTGCTGCGCTACAAACAAAAGTAGACTACTTATCT
GACAAAGTTGACATTCTTGGTAAGGAGGTTATATCTTTGAAGAAAGACTT
GACCATCAATCAATCTGCCCTGGCTATCTCAAAGATAACATCGTCACACC
TGAGAAATGAATTGGACCGACAGGAACAATACTCGAGAAGGAATTGTATT
GTGATGGACGGTGTGGCTGCTACACAGAAAGATACGCCTGACGAGCAGAC
AACTAAAGCCAAGAAAATTCTAATAGAATCTTTTCCAGATGATGACGAAA
TCATAACTGGGTTCGACAAAGCCCATCCAATTGGGCCCATTCTAAATGGC
AAACAATCATACATTATGAGGTTTGACAAACATTCGGTGGTCTCCAGAAT
CTACAAAAACCGCAATGATCTCAAAAAAAGAGGAATCACTGCACGTCCAT
CGCTAACCAAAACCCGATCTTCAACCTTACGACTGTGTCAACATTCTGCT
GAAAGTATCAGCTCGATTAAATTTGTCTTTAGTGACATTGAGGGTAACCT
CAAGGTCTGCTTCTCCAACAGAAACCTCAGAGGCAGAAATGTACATGCAT
TCGAGTCTGAGGACGACTTCAGACACCTTATCCTCAATCATGAACATGCA
ACTGATTTCCCTCAAGAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_037593XLOC_037593-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030_pilongenomesc0000030_pilon:971052..971885 -
Properties
Property NameValue
Aaloc583-819:238
Aaloc106-582:718
Aaloc82-105:745
Aaloc61-81:769
Aaloc1-60:835