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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000279_pilon:338702..342478+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037578 ID=XLOC_037578|Name=XLOC_037578|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3777bp|location=Sequence derived from alignment at sc0000279_pilon:338702..342478+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAATAAAAACAGTTGTTACATATTCTTGCATAATTTTTAGCATTAT
TATTTTAATAATCTCATTAGCAACAAACTATTGGCACGAGTATGAGATTC
CCGATGGAaaggtatgattttttttcatatttttttttcttttcgtccTT
CCATAGTTTTCCATATTGCTGTAGCCAGGAAcgaagttttttgttttttt
ttggccaattttacaCCCCCTCTTCTAtaagaccttttttcaaagaggcc
aacctgcctgttgaataattatgtagtccagcagaaaaacaatgataaaa
ccatgcataattattacaaatatgcatgatactaattatgcatggctcta
tcattgtttttatggctggactactttaatgggataaattttcgcgggga
ttaattttcgcggatttcgcggatttgggtgtcatccgcgaaaataagtc
ccattggaaatttgaaaaaggcccatccgcgaaaattagtttccgcgaaa
aatttgaatttttgttgcaattcgggaaatttctatttttatcgtttttt
attttttttcaacttttcatagttgtaatacatatctcctcgccctgttc
aaaaacaccctcttattacttaaaaaaaaaaattcttaattttcctggaa
aaattttatttcaatgttttgacccttttcaaaaattttaatttgtaccc
caatccgcgaaattaaatccccgcgaaaaatcaggaaatctctcatccgc
gaaaattaatccccgcaaaatcttaaaattttcgtGGATGAgatcaaccg
cgaaatttaatccccgcgaaaatttatcccattaaagtacataattattc
aacaggacgtcctctttgaaaaaaggtctatacgtTTGACACCCTCATTT
AGAAACtggagataggaataataacaTGGTgcattcttcaaaaaaatgtG
TTCAAATCACAAAGGGAATAGGAAAGAAATATGCAATATATAGAGGCCTG
CTACTAGGGATGTTGATAAAATTAATCAATACGATTGATTTGGATGGAGC
AGGGATCCATCCTTaaaaaaatactaatagccaaaaacaagaaaaattca
aaacaatgaaaatgtctccaaaaCTACttacagtctgggaaatcctctca
attgcacgcttatgttccgagggcagggcgtaagcgcgcaattgttctcg
cggggattaaatttcatgTATTTTGCGGATTTGGTTGTCATCCACAAAAT
TAAGTCACAATGGATATATTAGAAAAGTCTGATCCGCAAAATTCTCttga
acaaaactcaaaaaatgtcaaataactaCTTTGAATGTTAACTGGCATCA
AAGACGAGCTAATGATGTTTCATAGTTTGttcccccctttcttaaggggg
tgggatgacaccttccaaaaagttgaagaaggtggattagaaattttcat
gaaaaagggggcaatagcaaggaaggggggatagtttaagaaggggtggc
ttacatatatattgtagattattttcaagcacaggTTAaaaaatttggtc
ttcatgaaaggaagttttctgttagagtagtctgagtcaaaaagaacaaa
gaagtttattatttcgctttctctctaAGATATTTCaccatatatttgtt
agctatttttgtccaaaatccttggggataggcatttttaaaggttaggg
gatgccaagaagggggatcagacccctttccgcactgtgtttatttcaac
aaccaatatgtaTAATTTGGAAGTATAAAGacacaaaatcatgaaaatat
tgtctcctgATAATGCCAgtcgcaaaattaaatcttaaaaaatcttcaaa
tttgcTGGATGACCTCAACCACAAAATTTAATTCCCAataaattatatta
ttattattattaaattatattaGAGTATTTTGAAAGCATTTGCTAAGAAA
TTCCCTTGTATCATTCACACACGACCTCACTCAGTACAGTCTAGGGAGAG
TCTTATTGGGGCCAATGATACCAGACTAAATAATTGCTTCAATTTTGTGC
TGAAATAACagaatttgaaatgaaaatcacCAGTTAGAGCTGTCCTATTT
TTTCACAGTTGGAAAGATAGTTTATAGTGTAATATAACCATAAAATCACT
CGAGGAGTATGAGGTTTGGGAGGTGCAGTGTCAATGAATCTTTTTTCTAA
TCTCCAGTGTCATGTCCTCCACACGCCAAAATAATAACACCTATAGTTTG
GCTACTAATTCtgaaagttttagaaaatacgatttactttttgttttaga
cACCGCTCACAGTAACTTACTTCAATGTAGGATTATTTGAGAAATGTACA
GAGATTCACTATCGTTGGGGATGGCACAATACAACAGTGGAAGATCTTGG
ATGTGAAGATTATGAAcccccccTCTCGCTAGATGATTGGGAAagtatgt
ttttgttttgcaattgaaaatgaaaaaaatattttttaaattttcataga
aattttCTAAGAATATCTTTCAACAAAGACCCCCACCCCTTTcgaatttt
gtattttatgtTAGATTGTTATATTGgccttttccagaaaaaattgaata
tggggagTGGAGgatgtaatatttttttgaaatttaccccTGGGTATTGT
GACTTTTGAcactagcccccccccccccgaacagCATCAATTGACCCCCC
TTGACATTCAAAATTGCTGtctaacaaagaaaaattaccccAAATCAGAA
AAGTTTACCCCTCCGAACAAGGCAAATTtagcagatttttcactaccctc
ccctccggacactatatccttcAACCCCCCATGTAtgtattttctggaag
agcccattcttcCAGCAGGATTTGAAAACTGGTGTATCGTGAATTCAAAA
ACGAAGAAGAACTTTGAAGTCTCGCTAAGATTTGAGAAAGAATCTTTTGC
CTGTATTTCATTCTTGGCATCACTATAACCAGAAATAAATCAATGACGAA
TCATACCATAACTAGTTTAGACTTTTTTACGAGAATAGACTTTTTTacga
gaatagaccttttcataattacatcacaaacatcacttgcctcgtattca
aataatttccatggtgatcatatcccttgaggcatgatttttttatgaat
agaaagttgttgtaataaaatccgctgggagttaatcaccattgcattaa
ttttaaaaccaggcaagtgatgtttgtgacatAATTTACGAGGATTGATA
TGATAATCAATAAATGTTGTCTTTATGTTTCAGTGCGACGAGACACGTTA
GTTGTGATGTTTGTATTAGCTGTCATCTTCACCCTGATCAGTTTCATCTT
CATCACTGTTTATTGCGCTACTGGAAAATATTATTTCCCTGTTGGACGAA
CTGCTATCTGCTTCATTTTAGCTGGTAAGCCTTCAACCCTTTCAATTAGA
TGGAGtacaataattttattttctatagaGTGTCCTAGCGAGTGTTTTCT
CGTTTATTGATTATGCCTGAACTGatgtatttttgtgattttagacTTTT
CAGATGCTTTGCTTAAATAGTATTGCAAGATGCTCCAAGCCTGAAATCCT
TTAATTGCTCTTATGCATTTCTTTCTTGTTTTAGCAATTTGTGTAATGAT
AGGTTTGATAGTCTACACAAACACTTTCATCAACCACGATGTTGCATTCT
CATGGTCTTACGGCGCTGGATGGTCAGCCATTGCAATGTACATCATCACG
ACTATCTTGATCTACGCTGATAAATag Coding sequence (CDS) from alignment at sc0000279_pilon:338702..342478+ >XLOC_037578 ID=XLOC_037578|Name=XLOC_037578|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1080bp|location=Sequence derived from alignment at sc0000279_pilon:338702..342478+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAATAAAAACAGTTGTTACATATTCTTGCATAATTTTTAGCATTAT
TATTTTAATAATCTCATTAGCAACAAACTATTGGCACGAGTATGAGATTC
CCGATGGAaagATGTCAATAAAAACAGTTGTTACATATTCTTGCATAATT
TTTAGCATTATTATTTTAATAATCTCATTAGCAACAAACTATTGGCACGA
GTATGAGATTCCCGATGGAaagacACCGCTCACAGTAACTTACTTCAATG
TAGGATTATTTGAGAAATGTACAGAGATTCACTATCGTTGGGGATGGCAC
AATACAACAGTGGAAGATCTTGGATGTGAAGATTATGAAcccccccTCTC
GCTAGATGATTGGGAAaacACCGCTCACAGTAACTTACTTCAATGTAGGA
TTATTTGAGAAATGTACAGAGATTCACTATCGTTGGGGATGGCACAATAC
AACAGTGGAAGATCTTGGATGTGAAGATTATGAAcccccccTCTCGCTAG
ATGATTGGGAAaTGCGACGAGACACGTTAGTTGTGATGTTTGTATTAGCT
GTCATCTTCACCCTGATCAGTTTCATCTTCATCACTGTTTATTGCGCTAC
TGGAAAATATTATTTCCCTGTTGGACGAACTGCTATCTGCTTCATTTTAG
CTGTGCGACGAGACACGTTAGTTGTGATGTTTGTATTAGCTGTCATCTTC
ACCCTGATCAGTTTCATCTTCATCACTGTTTATTGCGCTACTGGAAAATA
TTATTTCCCTGTTGGACGAACTGCTATCTGCTTCATTTTAGCTGCAATTT
GTGTAATGATAGGTTTGATAGTCTACACAAACACTTTCATCAACCACGAT
GTTGCATTCTCATGGTCTTACGGCGCTGGATGGTCAGCCATTGCAATGTA
CATCATCACGACTATCTTGATCTACGCTGATAAATagCAATTTGTGTAAT
GATAGGTTTGATAGTCTACACAAACACTTTCATCAACCACGATGTTGCAT
TCTCATGGTCTTACGGCGCTGGATGGTCAGCCATTGCAATGTACATCATC
ACGACTATCTTGATCTACGCTGATAAATag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000279_pilon | genome | sc0000279_pilon:338702..342478 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 400-540:3637 |
| Aaloc | 259-396:3286 |
| Aaloc | 112-255:2300 |
| Aaloc | 1-111:1 |
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