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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:1243215..1249571- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037554 ID=XLOC_037554|Name=XLOC_037554|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6357bp|location=Sequence derived from alignment at sc0000042_pilon:1243215..1249571- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCCATAATCTCACTAAGAACGATCAGGCGTTTACAAAAGTATGC
TCCACTACTTTCGAGATGTCATTCTTCATTATCTCCACAACATACCGATT
ACGCTTATCTGACGGAAGATAATATCGTCAAATCGACCATTCAGTTAGAT
CATCCGGTGGAGGATTTGTTTACGTTTTTTAGTAAAAAGTTTCAGGAGTT
TGGAGATGAGGTTGCCATGGTAAGAAACTATTCAATATGAACAGAGTTTT
TGAAAGTCTCTGTCATCATGTTTTCGAGAACGCTCGAGACCCTTTCATTT
CGAGTCAATCTGGAAGGCTTCAAATTCAGCTTACACCCCTGTACCAGTAT
GCTATTTGAAATTTGCTTCTCAAAGATTCAAATACGCAAAAAATATACTG
GTTTGAATTTACTAGAAAATTCTCTTGGCTACATTTGAAGTCAGCTATTC
TAGTCAAACATTTTGCCCCTTTTTTGGCTGCATTTCTTTACCTCGTTTAA
TAAAAATTACTTTTCCATTACCTTTCATTCAACGCCACTTTCTAACCATA
GATTGATGAAAACACTGGCAAATCAACAAGTTATCTTGATCTCATTGCAA
ATGGAAAGCGGTTATCCTCTTTCTTTGAGCAAAAAGGTTATCAAATGGGT
GACCGACTAGCCATACATACGCCAAATTGTTTGGAGTACTCCTTCGCAAC
GATGGGTGCCCTTGCCAGTGGATTGACTTTAAACACAGTAAATTCAGCCT
ATACAAACTTTGAGCTTAAGAATTTGTTGAACAGCTCTACGCCTCGTGCG
TTGGTCACAAGCTCAGCACAACTAGAACAAGCCAGACGATGTATCGATGG
GACAAACACAGATCTCTTAATTTGCGTGGATGACGTAGCCTGCAATGACA
GTGGAGTTTTCAATTTATCGGATATCTTGAATAACGGTGATGAGAATTTC
AATAAAGATCTTTCAAAGTTGGATCTCAATAAGGAGACGGCATTTCTGTT
ATATTCGAGTGGAACAACAGGTCTACCAAAGGGTGTTATGATCAGCCATC
ATGCTTTCTCTTCCAATATCATCCAGCTTACTGGTAAGAAATGAGTCTGA
TTTGTGATCATTAATGACAACTGGGTACCTGATAGACATCACACTTCTTG
GAGATTGGTTTAAAAGGCATAGTCAGATGATTTGAGATATTTTGCCTGTA
GATTCCATCAATCCTTCTAAGCAGCACCTCCGGATGTCGAAGAAATCTAC
TGCGACCGCAAAATATCTCAAATGAATATCTCATCTGATTAGCCCTAAGT
TTACCAAGGCGAATGACATTAAAACCTCCGTATTTGTGAGAGCATCAATT
AAAAATGATTTCAGAAACTTTATATCATTCGAACTTAGTTCTCTTTTTTT
CTTGTTGCAGCGAAAAAAGTATATTCTGGGTTCTGCCTTGCCGCTTTGAA
TATCAGGACTTTTTAACATTCTACTTAGCAAAAATAAAGAAAAAGCTGTC
TTAAAAAAGATAATGATAGTTTTGTGTATATTATATTTAAGGTGCTTTGG
AAGGAATGCTCCCCAAGAAGACATTATGTTTTCTACCCATATATCACATC
TATGGTTTGAATTATATTATGATGTTACATCTTTACAATCGAAGTCAACT
TCACGTGGTACCAGGTTTTGATCCAGTTCAATTCCTATCGCTCATTCAAG
AGAAAAAGGTTAGTACTTGAATATGTAAAACCTTTTCACACAAAAATTGA
AAATTCTAGGCTACATTTTTCGCCTTTCTTGCTTTATTGTAAGTGCTCTA
AAGTAGGTTCGAAGGTTAGGGTTTTAACTCTGAGATTTAACGCTAGACTT
AATACTTAGGGCCTTAGGATCTGAGAATCCGAAAGTTCAAAAATAGTCCA
ATAAGGCTCAGAATATAGCCTGGAAATCTGCCAACCCTTCCCAAATTGAA
ATATTCGATTAAATTAAAGAAATAGCCCAAAATCGACTTTCTCGCCGGAA
CTTTAAATCTTGAAAAACGTTGAAATAACCAGAATTCTCAATATATTTAA
ACCATGATTGGTAGTCAATTTTGAACTAGACTGGAAATTACTTTCAAATT
AAAACTGACAAATAGATAAGAATTCTTTTTCTCTCATAGATCGAGCGTAT
ATCCATTGTACCACCAGTGGCAGTGTTTCTGTTAAACCATCCTTTAGTGG
ACCAGTATGATTTATCATCTCTCCGTTCTATCACCGTTGGAGCCGCTCCT
ATCGATGAAATCGCCATCAATCAATTCAACACGAAATTCCCAAATGTTAT
TCTACAGCAAGGTTTGTTCGTGGTTTGGAATATAATGTTCATGAAGAACT
TTCAGTTTCATTTTAAAGTACAATGGAGTCTCTATAACTCGAACACAAAT
TTTTTCGTGTTAATGAAATTTCAAGTTATGGAGTAAGGTTTACAAGGCAT
TGTTAACTGAAGGGATCATAAAAACTTGTTCGAGTTATAGAGGTTCGAGT
TAAGGAGACTCCACTGTATAGGGATATTTTGGTACGTTAAAGATGGCATT
TGTCATCCTGTTCCAACTCCTCTTGTATAGGATATGGTATGACAGAAACG
AACATTACACATTCCCAATGTATTTATCCACAACTTCAAAAAGCAGGATC
CTGTGGAACTGTTTTACCTGATGTTATGTGCAAGGTATGTTTAACTTTTC
CATATATCGGACAATAACAATACGTAATACATAGTTATCGGACAGTTGCA
AGTACAATATGAGAATCGATAACTATTACATATTGTACGAACAAATGTCT
CATAACTGGTTTATCGGTGACCCAAAAAATGCACTTTTTGTGTTGGAAAA
AAGTGCAGGGCACTTTTATAGCAAAGAACATCTTTACGTCAATTCATATT
TTGTACATGTAAAATACAAGATACATTCTAGAAAAACACCATGATTGTAC
TCTTTTTAACCAATCAGATTGCAGAAACTTTTTGTATCGCCGATAAACTC
ACTTTCTTGCTTACATGGGGTATCTGGATAAGTAAAACTTCTTTATTGGT
GAGATCTTAACTATATTTCAATTCACCGCTGTAATTTTTCGAACTCTGCC
AAAATAATGAGACAGGGGTGTTTTAAACCCTCTGAACAAATCAAGATGAA
ACTGAAAGAGAAAATCAATTTTTACAGGTGATTTCATTGGATAACGGGGA
AGCATTGGGACCGAACGAGCAAGGCGAAGTTTGTACTGGAGGAAATCAAC
TCATGACAGGTAACTAACATGGAAGAAGTTTCTTTATCTTTACAAGCTAT
TTAGTTTGAAAAAAAGTCAGAAATGGAACAGTGTCACAATCTGATCAGAA
TCTGATGAAATGCAGCATGTCCTCTTTACAAGCAGGAGCGATCCCCACAA
ATCAAGAAACCAGTATCTATTCCTTCCTTGTCAACATTGTGAAGCATTCT
CGATTCTCAATTGTCCTAAAATCCGTTAATTTCAAGTGAGCACTCGTTTT
TGCAATGTGGAAACCATGCCAATGTTGTCAAGACCAATTCCCTTAAAAGC
GGTTTCCACATGGTAACATAAGACATTGTATCTTAAGGGGGTAGTCATAT
GAGATTTTGAAAATTGGTGAAAAATTTATCAATTTCGGGATTTAAGGCTT
TTTAGTATCCTTTATCCTCCCTGAACATACCCTGAAAATTTCAAGGCCGT
AGCATAAATATCTGCCGATATATAGGGTTTCTTATGAGCCCTGGTATACA
ATTTTCTCCTTAGCAACGGTAAATCACATCCGTTGCTAGGGCCTCATTTC
CGTATGGCTGCTCTAAACATAGCATCATGACATACCAAATGAAAGCTCTT
TTTACGCCCTTTTTGGGCGTCTAAGTCAATACCGCCTTTTTCCCCCGGGA
TTTCTAAATATGACGTAATTAAAGATGGTAACCGAAGAAGTGGTATTTTC
AAAAACATTCACATTTTGGAGGCAGTCAGCTGTGTTTTTGACATGGAAAC
TGAGCTTATGTATTGTTTTGGATTGAATTATGATATTATTGAATGTTTCA
TTTCATTTCTCACATCTGGGAAAGCTTTGGAAGCCTATAATTGAGTGAAA
GCAACCATTTGATTCTGCGAACTGATGTTTTCGAGCAGTAAAACTTGTAC
ACCGAAAAAACTTTTCAAAGTGATGGACTATAGACTATGAACCATGGTAT
GAATAAAGTTTGAAACAAGGAACTAAACACATTCAATGATGTATCCATTA
TGAGTCTTAAATCCAGTGGAAATCTAGTCTTTGATGAATCGTGGCACTCA
TGGCGCCAGGAAGTGATCCTGGAAAATTGAGTAAAACTATGCATGATTGA
CGTTCAACCTGAAGACACGTTTCCCTAAGATCAACACTGAAATTCAACTG
TAAATGATATAAACAGATTTGAGGGAGCACAAGGATGATATATTTTGTTG
GCAATATGTTTTTTGACGAGAAAATGCACTTTTATTGACTTAAAGCCATG
TTTACGCGTTGTACGCAGAGTTGACGCAAAATACTTGGAGATTCCCGGAG
CACGTGGAAGGCCATTTTTTTCAAAAAACTTGGACTATTTTAGTATTTCC
AGTACCTTTTCAACATTAAAAGTAATGTGTCAATCCATTTTGGTCAACCA
CAGCAAAAATTTTGTAAAACGGTCTATGTATCGCAGAAAAATTGAGAAAA
ACCTCTATTTTTAACTTTCTGCGCCGTTTTCTCAAAACACGTTTTAGGGG
GTTTTCCCGCACCTTGTCAGCCTTTTTCTCAGGATTGAGAAAAGCTATTG
ACTTGAAATTTTCAGGGTAGTTTTCCATTATGGTAAGCCTCAGGATGAAT
GAAGCAGTTTTTCAAAAAAATCAATTTTTGACTTTTAAACTGAAAAAGTA
CAAATTTTAGGTTCCAGACCCCCTGGCTTGAAATTTTGAAAAATTTTTCC
ACTCATTCTGGAGACTTTCATAATACTAACCTTCACCAAAAAAAAATTTT
TGAATAGCTTTCTTAGCTTTTCTTAAAAGGTTGACACAATATTTTTATAG
CTTTTACCCCCTGGACGATATTACCCCCGTCTTTACTATTTTTAGAATTT
TTTTTTACTTTTTCATATCCTTTATAGTTGTGCTACAATTGTGGAAAGTT
TCATTGAAAAATATTTTTTACTTCACAAGATATAACAAAAAGTTTAAAAA
ATGACATTTCAAATTTCTCATATGACTACCCCCTTAAAAAGCGATGGGAC
TTTAGGCCTCCTTAAACAGATTAACCTTATTAAGAAGTCGAGAGTACGAA
TCGAAATCAATAATTAGAAATGAGTCGAATAATTTCGGTTACCTACAGGT
TATTACAACAATGAAGAGGCGACGAGAAACACGATCGATGAAGAAGGATG
GGTTCATTCAGGTGATCTTGGATACTATGATGATGATCTTAACTTTTTCA
TCATCGATCGATTGAAAGAACTCATCAAGTATAAAGGATTGCAAGTAAGA
ATATTTCATCAATAGTGTGCCAACACATGTATACGCGCATTGACCTTAGT
TTGATAGTAAACTACTAAACTGAAGACTGAAGTGAGCTCTAGTTTAGACG
GTCGACTTTCTGCCCTGCCTGTTCAAACTGTTAGAGTAGGCAAAAAGTGG
GCACAAAGTTAAAATCTTTCCCTGGAATAGATTGAAAGAAGTCATTGTAT
TGACGTCAAAAGAGGGCAATGCATTGACTTTAGACAGCCAACTTTCTGTC
GACATTGCAATTCTTCAACAACTGATTGGTTGAGAATGACGTATTGACTG
ATTTTACGTTACCCGTACGTTACTTACAACCAATCAGCTGTTTGGTCCGT
GATGTATTGTCAGAAGACATTGTAGTGGTGCATATCATGAATTAGAATAG
GCACGCGGGGAAAATTGGGCCGTCTAAACTAGAGCTGAGATCCGAACTCA
TGACTTTCTTAGTGCGACTGCTCTTCCGACTTTTAGCAAAGAAATAATTT
TAAAAACATTGAGTTTTGTTTGTTATTAGAAAACATCGTTTCCTAAGTTG
AATTTTATTTTTCCAGGTGGCACCAGCTGAACTTGAAGACCTTCTCCTCG
GTCATGCTCAAATAACGGATGCTTGTGTCATCGGCGTACCGTGTGACCGC
ACCGGCGAACTGCCACGCGCGTACATCGTTAAGCGACCTGATTCAACCCT
TACGACAAAAGACGTCGAAGATTACGTGGCCGACAAACTTTCAGATCATA
AGAAACTTAGAGGAGGTGTTGAATTTATCGAACAATTACCGAAATCGGCT
GCCGGCAAACTTTTGAGAAGAGTGCTTAAAGACCAGTTTTTGAATAGTAC
GAAATAG Coding sequence (CDS) from alignment at sc0000042_pilon:1243215..1249571- >XLOC_037554 ID=XLOC_037554|Name=XLOC_037554|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3426bp|location=Sequence derived from alignment at sc0000042_pilon:1243215..1249571- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCCATAATCTCACTAAGAACGATCAGGCGTTTACAAAAGTATGC
TCCACTACTTTCGAGATGTCATTCTTCATTATCTCCACAACATACCGATT
ACGCTTATCTGACGGAAGATAATATCGTCAAATCGACCATTCAGTTAGAT
CATCCGGTGGAGGATTTGTTTACGTTTTTTAGTAAAAAGTTTCAGGAGTT
TGGAGATGAGGTTGCCATGATGTCATCCATAATCTCACTAAGAACGATCA
GGCGTTTACAAAAGTATGCTCCACTACTTTCGAGATGTCATTCTTCATTA
TCTCCACAACATACCGATTACGCTTATCTGACGGAAGATAATATCGTCAA
ATCGACCATTCAGTTAGATCATCCGGTGGAGGATTTGTTTACGTTTTTTA
GTAAAAAGTTTCAGGAGTTTGGAGATGAGGTTGCCATGATTGATGAAAAC
ACTGGCAAATCAACAAGTTATCTTGATCTCATTGCAAATGGAAAGCGGTT
ATCCTCTTTCTTTGAGCAAAAAGGTTATCAAATGGGTGACCGACTAGCCA
TACATACGCCAAATTGTTTGGAGTACTCCTTCGCAACGATGGGTGCCCTT
GCCAGTGGATTGACTTTAAACACAGTAAATTCAGCCTATACAAACTTTGA
GCTTAAGAATTTGTTGAACAGCTCTACGCCTCGTGCGTTGGTCACAAGCT
CAGCACAACTAGAACAAGCCAGACGATGTATCGATGGGACAAACACAGAT
CTCTTAATTTGCGTGGATGACGTAGCCTGCAATGACAGTGGAGTTTTCAA
TTTATCGGATATCTTGAATAACGGTGATGAGAATTTCAATAAAGATCTTT
CAAAGTTGGATCTCAATAAGGAGACGGCATTTCTGTTATATTCGAGTGGA
ACAACAGGTCTACCAAAGGGTGTTATGATCAGCCATCATGCTTTCTCTTC
CAATATCATCCAGCTTACTGATTGATGAAAACACTGGCAAATCAACAAGT
TATCTTGATCTCATTGCAAATGGAAAGCGGTTATCCTCTTTCTTTGAGCA
AAAAGGTTATCAAATGGGTGACCGACTAGCCATACATACGCCAAATTGTT
TGGAGTACTCCTTCGCAACGATGGGTGCCCTTGCCAGTGGATTGACTTTA
AACACAGTAAATTCAGCCTATACAAACTTTGAGCTTAAGAATTTGTTGAA
CAGCTCTACGCCTCGTGCGTTGGTCACAAGCTCAGCACAACTAGAACAAG
CCAGACGATGTATCGATGGGACAAACACAGATCTCTTAATTTGCGTGGAT
GACGTAGCCTGCAATGACAGTGGAGTTTTCAATTTATCGGATATCTTGAA
TAACGGTGATGAGAATTTCAATAAAGATCTTTCAAAGTTGGATCTCAATA
AGGAGACGGCATTTCTGTTATATTCGAGTGGAACAACAGGTCTACCAAAG
GGTGTTATGATCAGCCATCATGCTTTCTCTTCCAATATCATCCAGCTTAC
TGGTGCTTTGGAAGGAATGCTCCCCAAGAAGACATTATGTTTTCTACCCA
TATATCACATCTATGGTTTGAATTATATTATGATGTTACATCTTTACAAT
CGAAGTCAACTTCACGTGGTACCAGGTTTTGATCCAGTTCAATTCCTATC
GCTCATTCAAGAGAAAAAGGTGCTTTGGAAGGAATGCTCCCCAAGAAGAC
ATTATGTTTTCTACCCATATATCACATCTATGGTTTGAATTATATTATGA
TGTTACATCTTTACAATCGAAGTCAACTTCACGTGGTACCAGGTTTTGAT
CCAGTTCAATTCCTATCGCTCATTCAAGAGAAAAAGATCGAGCGTATATC
CATTGTACCACCAGTGGCAGTGTTTCTGTTAAACCATCCTTTAGTGGACC
AGTATGATTTATCATCTCTCCGTTCTATCACCGTTGGAGCCGCTCCTATC
GATGAAATCGCCATCAATCAATTCAACACGAAATTCCCAAATGTTATTCT
ACAGCAAGATCGAGCGTATATCCATTGTACCACCAGTGGCAGTGTTTCTG
TTAAACCATCCTTTAGTGGACCAGTATGATTTATCATCTCTCCGTTCTAT
CACCGTTGGAGCCGCTCCTATCGATGAAATCGCCATCAATCAATTCAACA
CGAAATTCCCAAATGTTATTCTACAGCAAGGATATGGTATGACAGAAACG
AACATTACACATTCCCAATGTATTTATCCACAACTTCAAAAAGCAGGATC
CTGTGGAACTGTTTTACCTGATGTTATGTGCAAGGATATGGTATGACAGA
AACGAACATTACACATTCCCAATGTATTTATCCACAACTTCAAAAAGCAG
GATCCTGTGGAACTGTTTTACCTGATGTTATGTGCAAGGTGATTTCATTG
GATAACGGGGAAGCATTGGGACCGAACGAGCAAGGCGAAGTTTGTACTGG
AGGAAATCAACTCATGACAGGTGATTTCATTGGATAACGGGGAAGCATTG
GGACCGAACGAGCAAGGCGAAGTTTGTACTGGAGGAAATCAACTCATGAC
AGGTTATTACAACAATGAAGAGGCGACGAGAAACACGATCGATGAAGAAG
GATGGGTTCATTCAGGTGATCTTGGATACTATGATGATGATCTTAACTTT
TTCATCATCGATCGATTGAAAGAACTCATCAAGTATAAAGGATTGCAAGT
TATTACAACAATGAAGAGGCGACGAGAAACACGATCGATGAAGAAGGATG
GGTTCATTCAGGTGATCTTGGATACTATGATGATGATCTTAACTTTTTCA
TCATCGATCGATTGAAAGAACTCATCAAGTATAAAGGATTGCAAGTGGCA
CCAGCTGAACTTGAAGACCTTCTCCTCGGTCATGCTCAAATAACGGATGC
TTGTGTCATCGGCGTACCGTGTGACCGCACCGGCGAACTGCCACGCGCGT
ACATCGTTAAGCGACCTGATTCAACCCTTACGACAAAAGACGTCGAAGAT
TACGTGGCCGACAAACTTTCAGATCATAAGAAACTTAGAGGAGGTGTTGA
ATTTATCGAACAATTACCGAAATCGGCTGCCGGCAAACTTTTGAGAAGAG
TGCTTAAAGACCAGTTTTTGAATAGTACGAAATAGGTGGCACCAGCTGAA
CTTGAAGACCTTCTCCTCGGTCATGCTCAAATAACGGATGCTTGTGTCAT
CGGCGTACCGTGTGACCGCACCGGCGAACTGCCACGCGCGTACATCGTTA
AGCGACCTGATTCAACCCTTACGACAAAAGACGTCGAAGATTACGTGGCC
GACAAACTTTCAGATCATAAGAAACTTAGAGGAGGTGTTGAATTTATCGA
ACAATTACCGAAATCGGCTGCCGGCAAACTTTTGAGAAGAGTGCTTAAAG
ACCAGTTTTTGAATAGTACGAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:1243215..1249571 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1423-1713:292 |
| Aaloc | 1279-1422:1008 |
| Aaloc | 1195-1275:3181 |
| Aaloc | 1093-1194:3776 |
| Aaloc | 919-1089:4219 |
| Aaloc | 754-918:4815 |
| Aaloc | 220-750:5807 |
| Aaloc | 1-219:6358 |
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