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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:1317517..1322741- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037548 ID=XLOC_037548|Name=XLOC_037548|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5225bp|location=Sequence derived from alignment at sc0000042_pilon:1317517..1322741- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTTGAAGAGCACCACCCAAAACCTAGGAGAAGAATGAAGCAAGT
TTTGAATGACATAAAAGAAACGGTAATTATCTTAATTATCTCTCCATTTT
TTCACTCAAACTTTGTGGTACTTTGTAATATTAATGTATTTTTATTGAGA
TTAAAATGGATCAAAGCAATATGTATTTTTGAATTTAACACTTAGCTTTT
ATTTTAGGTGGAGTTTTATTTCAGTGATGCAAATCTACGACGTGATAGAT
TTTTCAGAAAAGAAATTGACCAATCAGAAGACGGGTGTAAGAATGAGTTT
TTGGTGAATTTCAACTCTAGTTGAAGTTTTAAGTTTCTAAACTTCACTGT
GATGTGATAGGCTAGATATAATTGTTTTTTTTTAAGGTTTAACTTCTGCA
TAGTTATGCATATAGTATCCTTTTTCAATAATTTTTCTACTATACTCTAT
AATGATGTATTTCCTCCAATTTTCAGATGTTGACTTCAAAACTTTACTCA
ATTGCAACAAAGTAAAGAGCTTAGAAGTTGATAAACAGACATTGACTAAA
GCTATAGAAAATTCAAAAGTTTTGGAGGTTTGAAGTTTTTTAATTTCACA
TCTTCATTAAATAAGTATATACACTTCATTCTAAAGCATGAATAAAGTTA
ATGGAATCATTAAAAAGTTGTTTAATGCCTTCAGAGGAAGTGGTTTTGGA
AATGCAAATTTATCATAAACATCACAAAACTTTCCTCCTTTTTGATAATT
TTACAGCCCTCCTTTTATTGTTTTCTTCTTTTTTAACAAGTTGAATGAAG
AGAAGACAAAAGTGAAGAGATGCACCACAATACCAGAGCTAAACTCTGAA
GAAGCTGACTCTAGAATCATCTATGTTGTAAGCATGATTTTTAGTCAAGA
ACTTTTTAACACAGGAATCAATTTTTAGCTTTTTGATTTAAAACTAAAAC
TTTTAATTAACTATTTTCTACTCAAATACCTTTGCTATCCATTTGGTATA
TTATTTTTGGACCTACCCCTGTGGGGTGGAGGTCCTATAAATTCACCTCT
GTCCGTTCGTCCGTCCGTTCGTTACCAGCTTTTCTCGAGATTGAATCATA
GGAATCATTTGATTTTTGATACAAAGGTGCAAAACGGTGGTGGCCAAAAT
GTAACAGAGCTCGATTTTCGAAAAAAAAATTTTTGGGCAAAAGGGTTTTT
TGGACTTTGTGAAATATTGGATCATTGTTTTTTTCAGATTTGCATGAAAG
TAGGTAAAAGATGGGTCAAGCAGATTTTTGTAAAAAAACTTTTCAGCTCA
AAAAACGCATATTTATCTATACGAATCACTATTAATAAGCATACATCAAT
GTTCATAACCAAATTACTCAATTTTTTGATGAGATAGATGTCTTTTTATG
CTCACGAAGTCTTGAATATGAAAGAATATGAAAGAGCATGAAATTTTGGT
TTCTAAACGTTTTTTTATAAGAAACAAACGACTAATTTTAATAAATCGTC
ACTATTTGTGTTCTGAATGATTGTTTAACGTTCATGCTCACGTAGATATC
AATTATATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATCAC
TTGTTTCAAAATGATTTTAGGAGCGGCTTTATGCGTTTGTAGATCATGAC
TGGCTCAAAAAAGTGTTTTCAATTTGTGGAAAAATTCAATACATCAGGTA
AGTTAAGTTACTGTTTCTTACTCAATATTGTTTCTATCAGTAGAATTAGG
TTAAAAGAGGCCCTACCCTAAATAACATGGGGCTGAAATTTGACATCATT
CTACTGGACATTTCGAATCGGAGTGTAATTGATCAAAGTTTTGAATTTTA
CTGAAGAGTTTTCGGAAGATCTTTCCGTAAACAATGTGTTTTACAAACTT
GAATAGTTGCCCTAACAATTTGAATATTAAATGTACCTGTCTTTTCAATA
GGTCATTTCACAGTCAAAATGGATCACGGGTAATCAGGACTAATTGCGCC
TCCATAATGGCTTTCTGTTACCAAGATGCAATAATCTTCAAAAATTTTCC
AAACTTTGGACCAATAGTAAATCATCATTATTAGTGTGCAGTGGTCCTGA
TTACCAATTACGCTTTGCAACTGTGAAATGGCCTATAAGGTTAATGAAAC
TTAAAAACTTAAATGTTTTCCAGCTTACCAAGATACAAACATGACAACAA
AATCAAAGGTTTTGCTTTTATTGAGTTTGCTACAGCAGAAGAAGCTGAAA
GAGCTTGCAAGGTAAATCATATATTTCCCCTAGTGAAAATCTTTAATTGT
GATCTTTTACATTTGGTATGTTTTACTTTTGTTTTCGAGTTTATGCTCTA
TTTTATTTATTTTTCTATGATGATAAGTGGATAAAAATTGCTTTTTTCAT
GTTCTAAAAAATAGGTTTTAAATTCAGTTGAGAAGAAGAGCCCAAAACAA
GAAGAATCTTCCTCGCCAATGAAAGGTCATCGTAAACGAAAAAGATCTAC
AAGCTTTTGTGAGTCAGAAAGCGATGCAAAAAAGGTTCTACCAGAAGCAA
CCCTGAGAAGACGGAGAACGGTCAGTGAATGTTCAAATGAAGCCGTTTCA
CCTGCTAAAACCAAGAAGAAGCGAAAATCTTCACTAGAAGATAGGTCTTT
GTCAGACCTTAAAGGTCAAATTGAAAATAATAAATTTGAAACAGATAAAG
AGGCTACAACTGAAAGTAGCACGGAACCTACTGAAGCAAATACAGATAAT
GAAAATGTTGAAGTTACAAATAATACAGATGCAGATTCGTCACAGAAAAA
GAAGAAAAATAGAAAACATACCAAGAAAGACAAAGAAGTAAAAGAAGTGG
TTGTTCCACCCCTTTACGTCATCTCAAAGTATATATTTTGTTTTATATTC
ATTCACCAATAGTTTAAACAAAACTCTGTTTTTCTTCTGGTTGATCCTTT
AGTATTTCAAGTGTTTTAGAGTAGATTATTTTGATGCGATGCTTTATATA
ATTTTAGCCTGTTTTAGCATGTTTACAGTCCCTTCATACATACACCGGTT
TAATTGGTAACTCTTCATCTAGCATAGCTAGAAAATGAATATTGCGTTTA
TGTTTTTCTTTTAGAGCAGAGTGGCTTTCTTTTAAACGACAATACAAACA
TTTGCAAAGAAAAGAATTTCAGAAGCTAAAACGAACTACAAAAATCCTTA
AAAGTGAACTGGTGAGACGAAAGGAGTTGAAAGAAAAATTCTCATCAGGC
CAAAGTTCAAAGACTGAAAATAGAGAGAAGAAGAGCCAACAAAACACTGC
ACAAGGACAAATTATAGCAACTAATAATGATAATAAAATTGGACAAAAGC
GTAAACATAAAGACGAACCATTGGTTGAGATTAAGGAGAACTCAAAAGAA
CAAAAAGCCAATGCTGAGCCAAGTGAGAAGAAAACAAAGAACTCATCTTA
TGAGCTTGAGCCTGGCAGTGTAATCAAAGTAGCCACATCAATGGAATCTC
TAACAAGAGACGTTATAAAAGTATCTATTTTTGTACTTTATCCTCAAAAT
ATTGAATTCTTTTATCCCGCCAAGACAATTCAACATTCTTCTCACAAGAA
ATTGTACCTTCCCTCTTCAATATAATTCCCTTCTTCAACTATAATAATCT
TACTATTACTTTTGCTTGATTCCAGACCACGTTATCACCTTATGGAGAAA
TTGCTTATGTGGATTATATAAATGGTGCTCTCAAGGTGTGTTGAATGTAT
TGTATTTCAGTTTCCCTTTCCCTCTATATCTTATGTTTCTGTATGATATT
GTAAAATTTTTGCTAATTTTATCAGGTTCTCAATCATATCCCCCCCAAAA
AATATCAAGTACCCCATTCAATTTAGTTATACCTTGCCTTTGAAGGTTAT
TACTTTCATGTAAATTTTATTTTTAGGGATATGTTCGTTTCAAGAGTGCT
GAGAGTCGAAAGGAAGTTGAAGAAACAGCCAAAAACAAACAAGATGGATG
GCAATTCAAAATCGAAGATTTGAAAGGTTCGGAACTGCTGACAATAGTCC
TACTTTTGAACCATAACAAATAATTCCCCCCTAAGTTTCCCTTAGAAATA
GTTTAGTTCCTGTGGACATCTACTCCATGGTTTCAGATTTTCACAAAACA
AAGCACTTCAAGAACATAATTACATTACATTTCTTATCACAGAGGGTGAA
GAGGAAGCGTACTTCAAAAAAGCTCTTGAAGAACGCGCCAAACGATATGA
GTTGAATGAGAAGAAGAAACAGAAGAGACAACAAAGAGGAACAATGAAAG
TAAGCTGGAATTTTGTTCAATTCTTTCCAATACATTTATCATGCATGAGA
CTGAGAGGTTCAATCATAGCCCGTATAAATAAACCTGGTCTGGAAGCTTA
TTGTTTTAACTTTTTGTTAGCTTTTTCCTTGGTTATTATCAAAAGATAAA
AATCGATATGCTCAGTTTTTGATCACGTTACCAAGTACTCCTCTTGGGAT
TGGTTTATAATTTAATCACGTGATCAAAAAGTGAGCAAAACGAACTAACT
TCTTAATGCAAGTTCAAGTAAGAAACTATGGAAAGAAACAAGGCTTCCAG
GCGGCGGTTTTTTATACAGACTACTTTTTGCAAAGTCGAAAAATTGACTT
TCGCAAATTTGAGGAAAAATGTTTTTCGCAAGCATAAACTTTCGCAAATT
GTTGGATAAAAATGGGAATTTTCGAATTAGAATTGCCTTAAAAGTGAAAA
ATATTCCTTAAATCCGATAATTAAAGACGGTTGCTCTTCGTGTGAGAGGA
AGTCCCAGAACAGATAACCTTCGCTTGATAAAAACAAACAAAAACTTTGC
CAATCAAAAGCTATCAATAAATAGCCTCAGTAATAGCGACGATGAACTGC
CAACAAAACATTAGTTGTTTTTTTAATTGTAAAAAGTAGCGTTGACTTTT
ATTAGCCTTTGTTGCTACCTTTTCGTCAACATGAAATAAACTATTACATA
CATACATACATTCGACTTTAAAAAGGCATAAGGATAACAATAGGCTGAAA
ATTTGATTCTTATTATGATTTCGAGTTTTATAAAGATTAAATTTGATACA
AGGGTTTGCCTTTGGTCTTAAATTTGGCAAAAAAATTTGTACACGATCCT
GCAGGATCAGCTTAGAAGATTTTCAACATGTTTTTTTTACAGGTTTTGAA
ACAAGCTGAAGACGTAGCAACTTAA Coding sequence (CDS) from alignment at sc0000042_pilon:1317517..1322741- >XLOC_037548 ID=XLOC_037548|Name=XLOC_037548|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3348bp|location=Sequence derived from alignment at sc0000042_pilon:1317517..1322741- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTTGAAGAGCACCACCCAAAACCTAGGAGAAGAATGAAGCAAGT
TTTGAATGACATAAAAGAAACGATGGAAGTTGAAGAGCACCACCCAAAAC
CTAGGAGAAGAATGAAGCAAGTTTTGAATGACATAAAAGAAACGGTGGAG
TTTTATTTCAGTGATGCAAATCTACGACGTGATAGATTTTTCAGAAAAGA
AATTGACCAATCAGAAGACGGGTGTGGAGTTTTATTTCAGTGATGCAAAT
CTACGACGTGATAGATTTTTCAGAAAAGAAATTGACCAATCAGAAGACGG
GTATGTTGACTTCAAAACTTTACTCAATTGCAACAAAGTAAAGAGCTTAG
AAGTTGATAAACAGACATTGACTAAAGCTATAGAAAATTCAAAAGTTTTG
GAGATGTTGACTTCAAAACTTTACTCAATTGCAACAAAGTAAAGAGCTTA
GAAGTTGATAAACAGACATTGACTAAAGCTATAGAAAATTCAAAAGTTTT
GGAGTTGAATGAAGAGAAGACAAAAGTGAAGAGATGCACCACAATACCAG
AGCTAAACTCTGAAGAAGCTGACTCTAGAATCATCTATGTTTTGAATGAA
GAGAAGACAAAAGTGAAGAGATGCACCACAATACCAGAGCTAAACTCTGA
AGAAGCTGACTCTAGAATCATCTATGTTGAGCGGCTTTATGCGTTTGTAG
ATCATGACTGGCTCAAAAAAGTGTTTTCAATTTGTGGAAAAATTCAATAC
ATCAGGAGCGGCTTTATGCGTTTGTAGATCATGACTGGCTCAAAAAAGTG
TTTTCAATTTGTGGAAAAATTCAATACATCAGCTTACCAAGATACAAACA
TGACAACAAAATCAAAGGTTTTGCTTTTATTGAGTTTGCTACAGCAGAAG
AAGCTGAAAGAGCTTGCAAGCTTACCAAGATACAAACATGACAACAAAAT
CAAAGGTTTTGCTTTTATTGAGTTTGCTACAGCAGAAGAAGCTGAAAGAG
CTTGCAAGGTTTTAAATTCAGTTGAGAAGAAGAGCCCAAAACAAGAAGAA
TCTTCCTCGCCAATGAAAGGTCATCGTAAACGAAAAAGATCTACAAGCTT
TTGTGAGTCAGAAAGCGATGCAAAAAAGGTTCTACCAGAAGCAACCCTGA
GAAGACGGAGAACGGTCAGTGAATGTTCAAATGAAGCCGTTTCACCTGCT
AAAACCAAGAAGAAGCGAAAATCTTCACTAGAAGATAGGTCTTTGTCAGA
CCTTAAAGGTCAAATTGAAAATAATAAATTTGAAACAGATAAAGAGGCTA
CAACTGAAAGTAGCACGGAACCTACTGAAGCAAATACAGATAATGAAAAT
GTTGAAGTTACAAATAATACAGATGCAGATTCGTCACAGAAAAAGAAGAA
AAATAGAAAACATACCAAGAAAGACAAAGAAGTAAAAGAAGTGGTTGTTC
CACCCCTTTACGTCATCTCAAAGTTTTAAATTCAGTTGAGAAGAAGAGCC
CAAAACAAGAAGAATCTTCCTCGCCAATGAAAGGTCATCGTAAACGAAAA
AGATCTACAAGCTTTTGTGAGTCAGAAAGCGATGCAAAAAAGGTTCTACC
AGAAGCAACCCTGAGAAGACGGAGAACGGTCAGTGAATGTTCAAATGAAG
CCGTTTCACCTGCTAAAACCAAGAAGAAGCGAAAATCTTCACTAGAAGAT
AGGTCTTTGTCAGACCTTAAAGGTCAAATTGAAAATAATAAATTTGAAAC
AGATAAAGAGGCTACAACTGAAAGTAGCACGGAACCTACTGAAGCAAATA
CAGATAATGAAAATGTTGAAGTTACAAATAATACAGATGCAGATTCGTCA
CAGAAAAAGAAGAAAAATAGAAAACATACCAAGAAAGACAAAGAAGTAAA
AGAAGTGGTTGTTCCACCCCTTTACGTCATCTCAAAAGCAGAGTGGCTTT
CTTTTAAACGACAATACAAACATTTGCAAAGAAAAGAATTTCAGAAGCTA
AAACGAACTACAAAAATCCTTAAAAGTGAACTGGTGAGACGAAAGGAGTT
GAAAGAAAAATTCTCATCAGGCCAAAGTTCAAAGACTGAAAATAGAGAGA
AGAAGAGCCAACAAAACACTGCACAAGGACAAATTATAGCAACTAATAAT
GATAATAAAATTGGACAAAAGCGTAAACATAAAGACGAACCATTGGTTGA
GATTAAGGAGAACTCAAAAGAACAAAAAGCCAATGCTGAGCCAAGTGAGA
AGAAAACAAAGAACTCATCTTATGAGCTTGAGCCTGGCAGTGTAATCAAA
GTAGCCACATCAATGGAATCTCTAACAAGAGACGTTATAAAAAGCAGAGT
GGCTTTCTTTTAAACGACAATACAAACATTTGCAAAGAAAAGAATTTCAG
AAGCTAAAACGAACTACAAAAATCCTTAAAAGTGAACTGGTGAGACGAAA
GGAGTTGAAAGAAAAATTCTCATCAGGCCAAAGTTCAAAGACTGAAAATA
GAGAGAAGAAGAGCCAACAAAACACTGCACAAGGACAAATTATAGCAACT
AATAATGATAATAAAATTGGACAAAAGCGTAAACATAAAGACGAACCATT
GGTTGAGATTAAGGAGAACTCAAAAGAACAAAAAGCCAATGCTGAGCCAA
GTGAGAAGAAAACAAAGAACTCATCTTATGAGCTTGAGCCTGGCAGTGTA
ATCAAAGTAGCCACATCAATGGAATCTCTAACAAGAGACGTTATAAAAAC
CACGTTATCACCTTATGGAGAAATTGCTTATGTGGATTATATAAATGGTG
CTCTCAAGACCACGTTATCACCTTATGGAGAAATTGCTTATGTGGATTAT
ATAAATGGTGCTCTCAAGGGATATGTTCGTTTCAAGAGTGCTGAGAGTCG
AAAGGAAGTTGAAGAAACAGCCAAAAACAAACAAGATGGATGGCAATTCA
AAATCGAAGATTTGAAAGGGATATGTTCGTTTCAAGAGTGCTGAGAGTCG
AAAGGAAGTTGAAGAAACAGCCAAAAACAAACAAGATGGATGGCAATTCA
AAATCGAAGATTTGAAAGAGGGTGAAGAGGAAGCGTACTTCAAAAAAGCT
CTTGAAGAACGCGCCAAACGATATGAGTTGAATGAGAAGAAGAAACAGAA
GAGACAACAAAGAGGAACAATGAAAAGGGTGAAGAGGAAGCGTACTTCAA
AAAAGCTCTTGAAGAACGCGCCAAACGATATGAGTTGAATGAGAAGAAGA
AACAGAAGAGACAACAAAGAGGAACAATGAAAGTTTTGAAACAAGCTGAA
GACGTAGCAACTTAAGTTTTGAAACAAGCTGAAGACGTAGCAACTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:1317517..1322741 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1666-1698:34 |
| Aaloc | 1561-1665:1032 |
| Aaloc | 1459-1557:1300 |
| Aaloc | 1399-1458:1551 |
| Aaloc | 1285-1398:1820 |
| Aaloc | 991-1281:2111 |
| Aaloc | 898-987:2440 |
| Aaloc | 853-891:2479 |
| Aaloc | 793-846:2533 |
| Aaloc | 505-783:2812 |
| Aaloc | 418-504:3052 |
| Aaloc | 340-414:3606 |
| Aaloc | 253-339:4436 |
| Aaloc | 154-252:4748 |
| Aaloc | 73-150:5019 |
| Aaloc | 1-72:5226 |
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