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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:1365915..1370713- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037545 ID=XLOC_037545|Name=XLOC_037545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4799bp|location=Sequence derived from alignment at sc0000042_pilon:1365915..1370713- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAATTTTTTAGTAATTTTTCTTTTTGTTGAGAAGTTTTTGTTGTC
AGTGGAAGCGGGATACACCATCATTTACCAAGGACCAGGTAGGATCGTCT
TTATAACTATGTGCGGTTTTTTTATTTCTGTGATGGGTTTTTAGATCTTT
CGTGAAAGGATTTTAAATCTTGAGTGTTCAACTACATATGTGAAATGTCC
CTTCTTAAGGTGACTTTTTTTTCGGACAGATAATTATCAAGACTTTTTCA
TAAATTCTTGAAAACTCAATTGTATGATTCTATAGCAATAGATTGATCAC
TAAATACCTGAAACGCATAAATATTTTATCATCCAATCCGTCAAAGGTAA
ATATGCATATAAAGTAGACCAGATCAACAAGAAGATCGGTGAATGTGTCA
CATTGCAACCCGTTATCAACTTTCCAACCAATGGAACGGAACGAATCACT
TGGAAAAAAGACACTCATTCTCTGATCCAATCAGAACGCATCAAAGTGTT
GGCTGATGGAAAGTAAGTGAGAAAATATCAATTTTACCATTGCCATCAAG
CTAATCTGTTCATTTATTGAAACAACTGGGAAAGATTTTGATTTAGAAAA
TCACCAGCAATGGTTACCTTCCAACTTCAAGATCAAAGTTGCGATTTAGA
TTGATTAAACGTCACTATTATTGATTCTTTTCAGCTTACAAATTAGATCG
TTGGAACCATCGGATTTTGCTTACTACCAAGCGACGGTAGAAAATACTTT
CGGTAAAGCTACGGAGAGTACTGATCTATGGCTTCATGTGACAGGTACCA
TACATGTTTTTTTCTTTTAGAAGCATAACGTTTATAAGCATATGCAGGGT
AAGTTTTTGGTACCTAAACAATGGCTCTATTGTTTAAGAACAATAGAATG
CTAAGCATAATGCGAGCCTGATATAGGGGCCCTTGCTTGCTTGATGGTGG
CCCGAAACATGACTTGCTAAAATCTGGCCTTCTATGTTATTATTTTTTTC
ATTGGTGTTATGTAGGATGTGGAAAGCACGAGAAGGAACTGGCAAGATCG
TCATCTTTATCGTGTACTACTTTATGTGAAGGTAAGGTCCATATTACCGG
TCGATGTTGCTGAGAAACTGAGAATTAACTTCAATAGTGGAAAACTTCTG
GAGAAGAGTTGACAAATACTGATAGTGATACTCTCTGAGAAAAATGATAT
AACAGTTGTTTTTTTACTTTTGAGACCATGTAAAGAGGTATAGTGTTCGA
TTAATAAAATTGATTAAAACATTCTAAGACAAAGCGTCTTGAATTTCTTT
ATTCGTAATGAAGATTAAACCACGGATAAATAGCACTTCATTAATGAGCA
AGGAAAGAAGTGTCAGATTTCAAGAACATTGGAGAATTATGTCACGATTT
CTGATACTGATATATTTGGGGGAATCTAGAAGGGGTAGATTGGCTGATCA
GGAACAAGTGGAAGTTGAAATAACCTCGAACAGATCTATCAACAAATTTT
GATATTTTTATATAAGTTGACAGGCAAATGCGTCGTCAAAGCCAAAAAAG
TCAGAACATTACAATAACATTCTAAGGTTTTGAGGACTGTAGAACATTAA
AATTAAGAATAGCTCAATAATCAAAACCCAAAAGTTAGGAACAAGCGAAG
GCCTCAAAAATTTCTGACGTTCTTATAACAAACTTGTATTTTATCTTTCA
CTTGATGTAACTTACTACCAAATTGTAATATCTTGGATTTCTATCTTCCA
GCCAAATGTCCTTCTGGTTGGACGTATGTGATTGGTACATCCTCCATGTG
TGCTCAATACTTTGCCAAGGGTGAAACGTGGAATCGTGCCTCAGAGAATT
GCCAAGCTATTGGTGCAGAATTGACGACCATTGAAAATGAAGTTGAGAAT
AGGTAAGTCTGAAAGCACAAACACACAGCTGGTAATCCAGTTCTTTTAAG
TAAGTTATGGGCTAAATGGTATCATCGTGAATTTTAAAGATCGAGATTCG
ACTTCCTAGCTGAATGATTGAAAACATTTAAAAGGTTTCAAGACTACTAG
TGAAAAGGTCTTAGGTAAAATATTTTCTGTCCTACTTGCCATTGTTATAA
TACCCCATACCCCCTTTTATTTTATCCCAAGATTCATCAGTAGCATGCTT
GAAACAGCAACCGGTGCTTGGATCGGATTAAATGACCGGGAATCGGAATC
GCAATACGTTTGGAATTTCAAACAATCATCCAGTCAAACGTATTTCACAT
GGGGAAAAAACGAACCAAGTAATTACAATGGGAATTGCAACATTGAGAAT
TGCGTCACTATGAAGAAAAGTAACGGTTATTGGAATGACGTCATCTGTGA
TTCATTTTATCCATTCGTTTGCCAAGTCAGCACTTCTTATAATGGTATGA
ACTTATCTTCACTTTTGATTCCCATTGTTCAAAAGCGAAGCCAATATAAT
TATTGGACTTGAGAAATCATAAGGCGTTCCTTTGTCGAACTACACACTCT
TTACTTGACCCTATTCTTTCTTTTAAAGAACAGAAAAATGAAGCATGCTG
ATGAAGTCACGAAAGATGACGAACATTTTTACATAAGCAGTCGCTTCATT
TTTCTGTTCTATAAATTTGCTGCTTTTACATTTTACGTTTTCTTTCTTTT
CACGTGTAGGATTTTCTTAGTCTTGATCGCAGACTAAAACCTCAGCAAGT
ATATTTAGGAGTACGAATCCGTTAGAGAACACCAAAAGATTGTCTGTAAA
GAGACAGTATCTACGGAAATTCCGACTACGCTACGTTGTATGTTAGATAC
ACTCCGGAACAGGGTAGCCAAAAAGCTGAAATGTCTCTAACATGATAAAT
TTTCTTTTTCAGAATCGGATGTTTCAGAATGGACATGTCGAGGGAATAGT
TGTTTCAAATTGTTCAATGATCACTTAGTGTGGAGTGAAGCAGTGAGCAG
GTGTCGGAAGATCCACCCTACCGCCCACATTGCCGCCATCACGTCTGGTA
GTATCAACGATTTGGTGCGGACTTTGATTAAAGAGCCAACTTGGATCGGA
CTGAATGATATTCGAGAAGCAGGTATGATAACACGCTTAAACCTTTAAAG
TTCACATACCAGCTCTTTGTTAAATCAAGAGCAGCTCCAAATTGACAATT
TCTCAAAGTCGAATTAAACGAAAATGTATAAAACAAGTCATTATACTCAA
ACACACAAAAACATTTTTAGTTCAAAATCCTGTGGAATCTGTTACGTTTT
AGACTATATTTGACGTAAATCTTTCTTTATATGTTTGAGTACAAGACTTG
TCGTATTATACTTTTTTACTCAGAATTTCATGTTCTATTTGATGGTATCA
ATCGTTTGCGTTTCAACTTTTAAAAATAGCCAATTTTTGCCCATTTTGGG
GGTTTTGCCTAGCACGTCAGTTTTTCGATCACAAAGAATTTTCCCAGGCC
TAATCCACGGGCCCTCTCTCAAATCCTATCTTCTTTCGAACAAACCAGAT
GCGGTTGTGTCCCACGAAATATCATAAAGGTTGCCTCCCCCCACTAATAA
GAGTGAATTCTATTTTGTGATTTGCGCTACGATGACTTTTGAAATTTTCA
CTTATTTTTGCTCTACGATAACGACATCGACACAGTGATCTGTGAAAAGA
AAAGCATCGTTTAAAACACTCTGGATATAAAAAAGCAAATGCAATAGAAT
TGTCGTAACTCGACATATTCCAAATAATGTAAACAGTATTTCTAATCCCT
TGAGAGAATTTTGATTTTTGTAATTGGCGTCCTCTTCTTGGCGTTCGAAT
CAAAAATCAAAAACACTTTTCTTCATTCAGGTGATTACGAATGGGAAGGT
TCGGACTCTTCTTTTTCTTATTCAAACTGGGACTGGGGAGAGCCTAACGA
TATATTTATACGGGACCGACAATTGAGTTGCCCTGGTGAGGATTGTGTTC
AAATCAAGAAATTTGGTGGTGATGTTACATGGCACGATTTAGGATGTGGT
ACTGTTTTGCCGTATATTTGTGAACGTGTGCGAGGTACGTCTTGTTTTGT
GTTCGAAAATAAACAAATTAAATTATATATGTATCCTTTATAGAAAATTT
GCAGTGCCCTACAATCATGGTCAAAATCTATTGAGAATTTAGCTTATTTC
CTCGTTTTTCGAAATTTGGAGTTCGGGCGAGAAAGTAGCTTTTGGGCTAA
TTGATAAATTCATTCGAGTATTTCAATTGGGGAGGGGTTTATAGGCTTCC
AGGCTATATTCTGAGCCCTATTTGACCATTCTTGAACTTTTGGATCCTCA
GATCCAAGTCTTAAGTCTAGCATTAATAAAACTAAGAGTTAAAACTCTAT
CCTTCCAGCCTAATTTAGAGCGCTTCCAAAACCGTTTGTGGTTATACGAT
TTCGTAGGAATTTCCCTTTCTTCCCAAATATTACGAACATGATTGTAGCA
CCTAGTAAATTTATACTTTAGAAGTATAGGTATATTCATAAAGGGTATTC
GTCGTAATAAACTGCGTATTTTCTGTTTTCCAATTTCAGACCGAGCATTC
AGTACTGGTGCATATGTCGCAATCGTTATCGGTGCATTTCTTTTCGCACT
TTTGGTCATTGGTTTAACACACGCTGCTTACCAACGTAAAAAGCGAACAG
CAGTGAAAGACATTATAAAAGCAGCATACAAGGAGGATATCAAACTAAGA
AAAAGTGAAGTCAAAGAAAAACAGAAAATTTCGTTTCGATCCGCCGCTAG
AATGGTCGTTCCAAGCATCAAAGTGTATAATAATCTGAAGTCATCATAA Coding sequence (CDS) from alignment at sc0000042_pilon:1365915..1370713- >XLOC_037545 ID=XLOC_037545|Name=XLOC_037545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3036bp|location=Sequence derived from alignment at sc0000042_pilon:1365915..1370713- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAATTTTTTAGTAATTTTTCTTTTTGTTGAGAAGTTTTTGTTGTC
AGTGGAAGCGGGATACACCATCATTTACCAAGGACCAGATGGCTAATTTT
TTAGTAATTTTTCTTTTTGTTGAGAAGTTTTTGTTGTCAGTGGAAGCGGG
ATACACCATCATTTACCAAGGACCAGGTAAATATGCATATAAAGTAGACC
AGATCAACAAGAAGATCGGTGAATGTGTCACATTGCAACCCGTTATCAAC
TTTCCAACCAATGGAACGGAACGAATCACTTGGAAAAAAGACACTCATTC
TCTGATCCAATCAGAACGCATCAAAGTGTTGGCTGATGGAAAGTAAATAT
GCATATAAAGTAGACCAGATCAACAAGAAGATCGGTGAATGTGTCACATT
GCAACCCGTTATCAACTTTCCAACCAATGGAACGGAACGAATCACTTGGA
AAAAAGACACTCATTCTCTGATCCAATCAGAACGCATCAAAGTGTTGGCT
GATGGAAACTTACAAATTAGATCGTTGGAACCATCGGATTTTGCTTACTA
CCAAGCGACGGTAGAAAATACTTTCGGTAAAGCTACGGAGAGTACTGATC
TATGGCTTCATGTGACAGCTTACAAATTAGATCGTTGGAACCATCGGATT
TTGCTTACTACCAAGCGACGGTAGAAAATACTTTCGGTAAAGCTACGGAG
AGTACTGATCTATGGCTTCATGTGACAGGATGTGGAAAGCACGAGAAGGA
ACTGGCAAGATCGTCATCTTTATCGTGTACTACTTTATGTGAAGGATGTG
GAAAGCACGAGAAGGAACTGGCAAGATCGTCATCTTTATCGTGTACTACT
TTATGTGAAGCCAAATGTCCTTCTGGTTGGACGTATGTGATTGGTACATC
CTCCATGTGTGCTCAATACTTTGCCAAGGGTGAAACGTGGAATCGTGCCT
CAGAGAATTGCCAAGCTATTGGTGCAGAATTGACGACCATTGAAAATGAA
GTTGAGAATAGCCAAATGTCCTTCTGGTTGGACGTATGTGATTGGTACAT
CCTCCATGTGTGCTCAATACTTTGCCAAGGGTGAAACGTGGAATCGTGCC
TCAGAGAATTGCCAAGCTATTGGTGCAGAATTGACGACCATTGAAAATGA
AGTTGAGAATAGATTCATCAGTAGCATGCTTGAAACAGCAACCGGTGCTT
GGATCGGATTAAATGACCGGGAATCGGAATCGCAATACGTTTGGAATTTC
AAACAATCATCCAGTCAAACGTATTTCACATGGGGAAAAAACGAACCAAG
TAATTACAATGGGAATTGCAACATTGAGAATTGCGTCACTATGAAGAAAA
GTAACGGTTATTGGAATGACGTCATCTGTGATTCATTTTATCCATTCGTT
TGCCAAGTCAGCACTTCTTATAATGATTCATCAGTAGCATGCTTGAAACA
GCAACCGGTGCTTGGATCGGATTAAATGACCGGGAATCGGAATCGCAATA
CGTTTGGAATTTCAAACAATCATCCAGTCAAACGTATTTCACATGGGGAA
AAAACGAACCAAGTAATTACAATGGGAATTGCAACATTGAGAATTGCGTC
ACTATGAAGAAAAGTAACGGTTATTGGAATGACGTCATCTGTGATTCATT
TTATCCATTCGTTTGCCAAGTCAGCACTTCTTATAATGAATCGGATGTTT
CAGAATGGACATGTCGAGGGAATAGTTGTTTCAAATTGTTCAATGATCAC
TTAGTGTGGAGTGAAGCAGTGAGCAGGTGTCGGAAGATCCACCCTACCGC
CCACATTGCCGCCATCACGTCTGGTAGTATCAACGATTTGGTGCGGACTT
TGATTAAAGAGCCAACTTGGATCGGACTGAATGATATTCGAGAAGCAGAA
TCGGATGTTTCAGAATGGACATGTCGAGGGAATAGTTGTTTCAAATTGTT
CAATGATCACTTAGTGTGGAGTGAAGCAGTGAGCAGGTGTCGGAAGATCC
ACCCTACCGCCCACATTGCCGCCATCACGTCTGGTAGTATCAACGATTTG
GTGCGGACTTTGATTAAAGAGCCAACTTGGATCGGACTGAATGATATTCG
AGAAGCAGGTGATTACGAATGGGAAGGTTCGGACTCTTCTTTTTCTTATT
CAAACTGGGACTGGGGAGAGCCTAACGATATATTTATACGGGACCGACAA
TTGAGTTGCCCTGGTGAGGATTGTGTTCAAATCAAGAAATTTGGTGGTGA
TGTTACATGGCACGATTTAGGATGTGGTACTGTTTTGCCGTATATTTGTG
AACGTGTGCGAGGTGATTACGAATGGGAAGGTTCGGACTCTTCTTTTTCT
TATTCAAACTGGGACTGGGGAGAGCCTAACGATATATTTATACGGGACCG
ACAATTGAGTTGCCCTGGTGAGGATTGTGTTCAAATCAAGAAATTTGGTG
GTGATGTTACATGGCACGATTTAGGATGTGGTACTGTTTTGCCGTATATT
TGTGAACGTGTGCGAGACCGAGCATTCAGTACTGGTGCATATGTCGCAAT
CGTTATCGGTGCATTTCTTTTCGCACTTTTGGTCATTGGTTTAACACACG
CTGCTTACCAACGTAAAAAGCGAACAGCAGTGAAAGACATTATAAAAGCA
GCATACAAGGAGGATATCAAACTAAGAAAAAGTGAAGTCAAAGAAAAACA
GAAAATTTCGTTTCGATCCGCCGCTAGAATGGTCGTTCCAAGCATCAAAG
TGTATAATAATCTGAAGTCATCATAAACCGAGCATTCAGTACTGGTGCAT
ATGTCGCAATCGTTATCGGTGCATTTCTTTTCGCACTTTTGGTCATTGGT
TTAACACACGCTGCTTACCAACGTAAAAAGCGAACAGCAGTGAAAGACAT
TATAAAAGCAGCATACAAGGAGGATATCAAACTAAGAAAAAGTGAAGTCA
AAGAAAAACAGAAAATTTCGTTTCGATCCGCCGCTAGAATGGTCGTTCCA
AGCATCAAAGTGTATAATAATCTGAAGTCATCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:1365915..1370713 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1261-1518:259 |
| Aaloc | 1057-1257:968 |
| Aaloc | 847-1053:1936 |
| Aaloc | 583-843:2668 |
| Aaloc | 433-579:3047 |
| Aaloc | 367-429:3783 |
| Aaloc | 256-363:4115 |
| Aaloc | 91-252:4452 |
| Aaloc | 1-87:4800 |
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