|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:818175..821348- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037521 ID=XLOC_037521|Name=XLOC_037521|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3174bp|location=Sequence derived from alignment at sc0000080_pilon:818175..821348- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGCGTTTGATGTCACTCTCGCGGCACGTTACACACTCGTTATTTGT
TAATCCCTCGGGCAATAGGCGGTTAGGCGGCGAGCGTTCTTTAATTCTCC
AATCAGTGTCCGGCTATTTGGATGAAAACAAAAAAGTTAAAAAGGGAGTG
CTATCAGTGAAAGTTATTGTGACATGTTATGACAGAAAGTATGATTGATA
AACTTGGTGAAGTTATCAAAACAAATTTGTTGTCAAAGAGATTTAACAGT
AAGTGAAAATACAGGCCAAGATATTTACCAGTCCCATGTTTCGACCAATC
GTCCCAAGTTAGAGCAGTTGACGGTACCATTTAAAGCACACTCAGTTGAT
TTTTGTCCTGCTTTTTCAGGGTACTTAGCTTAAAAGTGCTTGGGTGCAGC
ATTGGGTATTAAGTCTACACTACACTGTGTGTTTCTTTGTAATATTTAGC
ATAAAAAAATTACTGGGCTATGATATCAGTCAGGGATATCCTTGCCATCC
CATGGGTTGCAATTTATACAATGGGTAGAAAACAAAAATGACTAATACTG
TGGACCTTGTATTCATTAGGTGAATGGATAAAATTGTTTTGCAGGGAATT
ATTGGAAGGATGAAATTTAAATTCTAATGGATCAATTTTTTTCTTTCATA
TTTTAAGATTATTTACTATTAAAATGAAGTTTTCCTCTTTTGCCAATTTT
TGTCAAAGATCAAATTAATATTTCATGCCCAACCATTCGGTTCTTCAAAC
TGAATTCAAACTCAATCTTTGAAATAAAAACGATAGCAGCTCAAAACCCT
GGAAATTTTCCTGCCAACCCTAGACATCCTATCACATTTACACATGGCAT
GGAAAACCCATTGGTAATACACACCCAACGTGATTGCAAGGGTATACTAG
GCTGCTAAGTGACAGTTGTGTTGTAAAAGACAAATCAATTAGAGGACGTT
ATCATTAATAATATTTATTATACTGTAGTAAAGTTATTCAAAAGACCAGA
GTTATATACCTGATTTAAGTCTAAGATTCCAAGACAATTGAATAGAATTG
AATAGCAAATCGACCAACCAAAATTTGTTATTTAAAACTGCTGAGAAAAC
CTCATGATTTTTTCTATTTTTCCTAGAGACCATTGTTTTCTATATAAATA
ATTACTTTTTTGTTTTAGAAATAGACTTATATCCATGGAAATAAATAAAA
ATGAATATAAAACCTAACATCTCTGACCCTTACCGAAAAGGAGTGTCAGC
TCGTCATGGTTTTCAAACACCAGTCACATCAATTCCACCATGGGTAAAAA
GTGTACGTGAAAATAATGCCATTCAACATCATAGACAAACCAATGCTGCG
TTGTATCCTCAACCTCAAGTCCTTCCCGCAAAATCATTTCCACAACAAAA
TACAAATATAGTTACAACAAGAGCTATGTTTTACGGTTCTGTTAACCCAC
CAGTTGTCAAAAGTGGTCAAGCTACACCAAGAATAATACCGCTGAATGAA
GTGCCTAGATTTAATGTTGTTCGTCCTAATCAATTTATTCAGCCTATTGT
ATCAAAGCAAATTATATCTCATCCTACAATACATGTACTACAAGCTCCTG
GTGTTGTGAAGATCCACCCTGCTTCGTTGAATCAAACGCCACAAGTAGTT
CAGCAACAGCAAGTACCAGTTATTCCCTACTCTGCTAGTCAAATAGCCAC
AACCACAAACTCACATAACTTCAATCAAGGTCAATGGCAAAGTACTGATG
CAAGAACAGAAAATACATACAATTCCCAACAATACCCACCTAAAGATGGA
TCACATTCAAAATTTGATTGGGATAGACAACAAAACACAGCTTCTAGAAA
TGACCCATATCATCAAATAAACTACTCTTCACAAGGTGAACAGCACCATG
GACAGCAATCAACAAGAAATTTTGCATTCAAAGACCAGAAAGAAAGCACA
GATAAAACAGAAAATGAATATAATAATTATAACCCTACGAAGGAAAGGGC
AAAAGATACAGCGCAAGATCAACAGAGAACAATCAGAAATGATTATTCAT
ATCATAACAAACCTCCTGGTATTGAGAGAGAAAGAGAAACAAATTTTAGA
GATCCGGAAAGTATCGCTAGAAACAATGGTTCGTATCACAACAAATACGC
AGATCCAGATAGAGCAATGGAAATGTCTAATTATGGAGCTAAAACTCAAC
AACAAGCTGCAGTCAGAAGTGGTTATTACTCCCATGATAAACATTTTTCT
AATCACGGTAAAACAACAGAAACAGCTAATTTTCAAGCTGGTGCAACGAT
TTATCAGAAAAACACAGACAATCCCTATTGGGAAAAACATGATAGACAAA
AAGAAACATCAAGTTTCACTTCTAGAGACCATAATATAAGAAGTAATGTA
ACTAAAACTGACTATACTTATCAAACAAAACAAGATCAACAATACAAAGT
TCATGATCGTCCAAGCTTGTATGATGAACAGAAAAAGCAAAACATTATTG
TTAACCCCAAATTTTATGGGCACCAATCAAATGAAGGAAATTTATATACC
AATATGGAATCTAACAGGGATCAAGTTTCTTTGAGGAATGAGTATAAAAA
CTTTCCTCAGTATTCATATCCACCTATTATGCAGGCAGTTGCAAGTGAAA
CTTCATCAATGACAACAGCACCTCCAAATAAAATTAATTCAATCTTGAAG
AACAATAAAAATCAGTATGAAACTAATCAGGAAACATATCAAAAGGAGGC
ACAAAAAACAGATTATTCCCAAGCAAATCTTTATGGTGAGTCCTATCTGA
AAGACTTTTCTTGTGCTAGCAACCCCAAACAAGTTGATGAAAGGGTATTC
AATAAGCAAAATTTATTCAATCAAAAAAATTCAAAACAGAACATTTCAAG
AGGTTCAACCTCTGATTTGCGACCAGCTGTTGCCACACCTTTTTTGTGGA
AAAAGAAAGACTCTTCAAATGAACAATCAAATGTAATACAAAATGTTTCA
GACCAAAGCAAAGATTCTTCAGAGTCTAGTATTGGTATGTTTCACGTTTG
TGTATGTAAAACTACTGAAGAAGAAATGGCGCATGCCAACTATTTTGTTA
AAGCATATAACTTTCAGGACTTGTTATCATACATGTCCGACCCGATGATA
CGCACTCTTCAACGTGAAAGGAGC Coding sequence (CDS) from alignment at sc0000080_pilon:818175..821348- >XLOC_037521 ID=XLOC_037521|Name=XLOC_037521|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3582bp|location=Sequence derived from alignment at sc0000080_pilon:818175..821348- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGCGTTTGATGTCACTCTCGCGGCACGTTACACACTCGTTATTTGT
TAATCCCTCGGGCAATAATGGAGCGTTTGATGTCACTCTCGCGGCACGTT
ACACACTCGTTATTTGTTAATCCCTCGGGCAATACAGTTGTCAAAAGTGG
TCAAGCTACACCAAGAATAATACCGCTGAATGAAGTGCCTAGATTTAATG
TTGTTCGTCCTAATCAATTTATTCAGCCTATTGTATCAAAGCAAATTATA
TCTCATCCTACAATACATGTACTACAAGCTCCTGGTGTTGTGAAGATCCA
CCCTGCTTCGTTGAATCAAACGCCACAAGTAGTTCAGCAACAGCAAGTAC
CAGTTATTCCCTACTCTGCTAGTCAAATAGCCACAACCACAAACTCACAT
AACTTCAATCAAGGTCAATGGCAAAGTACTGATGCAAGAACAGAAAATAC
ATACAATTCCCAACAATACCCACCTAAAGATGGATCACATTCAAAATTTG
ATTGGGATAGACAACAAAACACAGCTTCTAGAAATGACCCATATCATCAA
ATAAACTACTCTTCACAAGGTGAACAGCACCATGGACAGCAATCAACAAG
AAATTTTGCATTCAAAGACCAGAAAGAAAGCACAGATAAAACAGAAAATG
AATATAATAATTATAACCCTACGAAGGAAAGGGCAAAAGATACAGCGCAA
GATCAACAGAGAACAATCAGAAATGATTATTCATATCATAACAAACCTCC
TGGTATTGAGAGAGAAAGAGAAACAAATTTTAGAGATCCGGAAAGTATCG
CTAGAAACAATGGTTCGTATCACAACAAATACGCAGATCCAGATAGAGCA
ATGGAAATGTCTAATTATGGAGCTAAAACTCAACAACAAGCTGCAGTCAG
AAGTGGTTATTACTCCCATGATAAACATTTTTCTAATCACGGTAAAACAA
CAGAAACAGCTAATTTTCAAGCTGGTGCAACGATTTATCAGAAAAACACA
GACAATCCCTATTGGGAAAAACATGATAGACAAAAAGAAACATCAAGTTT
CACTTCTAGAGACCATAATATAAGAAGTAATGTAACTAAAACTGACTATA
CTTATCAAACAAAACAAGATCAACAATACAAAGTTCATGATCGTCCAAGC
TTGTATGATGAACAGAAAAAGCAAAACATTATTGTTAACCCCAAATTTTA
TGGGCACCAATCAAATGAAGGAAATTTATATACCAATATGGAATCTAACA
GGGATCAAGTTTCTTTGAGGAATGAGTATAAAAACTTTCCTCAGTATTCA
TATCCACCTATTATGCAGGCAGTTGCAAGTGAAACTTCATCAATGACAAC
AGCACCTCCAAATAAAATTAATTCAATCTTGAAGAACAATAAAAATCAGT
ATGAAACTAATCAGGAAACATATCAAAAGGAGGCACAAAAAACAGATTAT
TCCCAAGCAAATCTTTATGGTGAGTCCTATCTGAAAGACTTTTCTTGTGC
TAGCAACCCCAAACAAGTTGATGAAAGGGTATTCAATAAGCAAAATTTAT
TCAATCAAAAAAATTCAAAACAGAACATTTCAAGAGGTTCAACCTCTGAT
TTGCGACCAGCTGTTGCCACACCTTTTTTGTGGAAAAAGAAAGACTCTTC
AAATGAACAATCAAATGTAATACAAAATGTTTCAGACCAAAGCAAAGATT
CTTCAGAGTCTAGTATTGGTATGTTTCACGTTTGTGTATGTAAAACTACT
GAAGAAGAAATGGCGCATGCCAACTATTTTGTTAAAGCATATAACTTTCA
GGACTTGTTATCATACATGTCCGACCCGATGATACGCACTCTTCAACGTG
AAAGGAGCCAGTTGTCAAAAGTGGTCAAGCTACACCAAGAATAATACCGC
TGAATGAAGTGCCTAGATTTAATGTTGTTCGTCCTAATCAATTTATTCAG
CCTATTGTATCAAAGCAAATTATATCTCATCCTACAATACATGTACTACA
AGCTCCTGGTGTTGTGAAGATCCACCCTGCTTCGTTGAATCAAACGCCAC
AAGTAGTTCAGCAACAGCAAGTACCAGTTATTCCCTACTCTGCTAGTCAA
ATAGCCACAACCACAAACTCACATAACTTCAATCAAGGTCAATGGCAAAG
TACTGATGCAAGAACAGAAAATACATACAATTCCCAACAATACCCACCTA
AAGATGGATCACATTCAAAATTTGATTGGGATAGACAACAAAACACAGCT
TCTAGAAATGACCCATATCATCAAATAAACTACTCTTCACAAGGTGAACA
GCACCATGGACAGCAATCAACAAGAAATTTTGCATTCAAAGACCAGAAAG
AAAGCACAGATAAAACAGAAAATGAATATAATAATTATAACCCTACGAAG
GAAAGGGCAAAAGATACAGCGCAAGATCAACAGAGAACAATCAGAAATGA
TTATTCATATCATAACAAACCTCCTGGTATTGAGAGAGAAAGAGAAACAA
ATTTTAGAGATCCGGAAAGTATCGCTAGAAACAATGGTTCGTATCACAAC
AAATACGCAGATCCAGATAGAGCAATGGAAATGTCTAATTATGGAGCTAA
AACTCAACAACAAGCTGCAGTCAGAAGTGGTTATTACTCCCATGATAAAC
ATTTTTCTAATCACGGTAAAACAACAGAAACAGCTAATTTTCAAGCTGGT
GCAACGATTTATCAGAAAAACACAGACAATCCCTATTGGGAAAAACATGA
TAGACAAAAAGAAACATCAAGTTTCACTTCTAGAGACCATAATATAAGAA
GTAATGTAACTAAAACTGACTATACTTATCAAACAAAACAAGATCAACAA
TACAAAGTTCATGATCGTCCAAGCTTGTATGATGAACAGAAAAAGCAAAA
CATTATTGTTAACCCCAAATTTTATGGGCACCAATCAAATGAAGGAAATT
TATATACCAATATGGAATCTAACAGGGATCAAGTTTCTTTGAGGAATGAG
TATAAAAACTTTCCTCAGTATTCATATCCACCTATTATGCAGGCAGTTGC
AAGTGAAACTTCATCAATGACAACAGCACCTCCAAATAAAATTAATTCAA
TCTTGAAGAACAATAAAAATCAGTATGAAACTAATCAGGAAACATATCAA
AAGGAGGCACAAAAAACAGATTATTCCCAAGCAAATCTTTATGGTGAGTC
CTATCTGAAAGACTTTTCTTGTGCTAGCAACCCCAAACAAGTTGATGAAA
GGGTATTCAATAAGCAAAATTTATTCAATCAAAAAAATTCAAAACAGAAC
ATTTCAAGAGGTTCAACCTCTGATTTGCGACCAGCTGTTGCCACACCTTT
TTTGTGGAAAAAGAAAGACTCTTCAAATGAACAATCAAATGTAATACAAA
ATGTTTCAGACCAAAGCAAAGATTCTTCAGAGTCTAGTATTGGTATGTTT
CACGTTTGTGTATGTAAAACTACTGAAGAAGAAATGGCGCATGCCAACTA
TTTTGTTAAAGCATATAACTTTCAGGACTTGTTATCATACATGTCCGACC
CGATGATACGCACTCTTCAACGTGAAAGGAGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:818175..821348 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 70-1791:1723 |
| Aaloc | 1-66:3175 |
|
