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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:906754..913430- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037500 ID=XLOC_037500|Name=XLOC_037500|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6677bp|location=Sequence derived from alignment at sc0000080_pilon:906754..913430- (Clytia hemisphaerica_ch_hm2_pilon)
TCTCGACAGAGCACTGAAGGTGAACAGGCAGCCAGTAAAAAGTCCAAAAA
AGAAGATGAAAAGGTTGATGAAGTTGTAAGTAGTTGACTAAAATTGTTGA
ATTTTAAAATTCTTAAGGTCTTGTTAGACGGTAACATTTTTGTGTAACAT
TTGCTAACATTTCTAAAAATAGAAGATTTCAAAAGTGTGCTCAAGAAATG
TTAACATATGTTACACGCAAACATTTTGTGTGTAACATTTGATTTTTTTT
ATTAAAAAAGAGAGAAAAAGAGAGAAAAATCGGCGAAAAAACACGTGCGC
ACTTGAAGTATCCTTTTAAATTCCCTTTAAATGGCGGCATCCTTTGATTC
AAAATGTTAACCATCGAGAGCAAATCATTTTTTTTTGATTTGCTATCTGC
GCGTAACATTCGTTAACATTTGAATGTTTCTGAATGTTAATCAATGTTAC
ACAGTAACATTTTGTACAACATTTGCTATTTTTAGAAAATGTTACACAAA
AATGTTACCGAATGTTATCGTCTAACAAGACCTTTACTATTTCATATTTA
TGATTAAACCTTACCAGGTGTGCCATAAGAAAATCCTGTGTTTACATAAT
ATAAGAACTTTCTATGGATCCTTTTTATTGCAAAAACTTGAACTTGAAAT
TTAAAATCGCCTCAATCATTCAAAAGTTATGTTAAAAAAACTTCTGACCT
TCCCAAAAATCTCAAAATTCATTAAAAACAATAGTAGTAGGTCTTTAGAT
CTTCAACTTAGACTGCTGAACATGGTTCTTATTGGTAATATTCTAAAAGT
CAATCTTCATTTTTTTAGGAGAAAGAAAACGATCAAAAGGAAAACTTTTC
TCTTGTTACAAAAACTAAAGATGGAAGGTATGTACTTATATAAATCATCT
TCTAAGCATTACCTCCTAAAATTTTGCAATGTTTATAACTATGCTATTTT
TGTGTGAAACATTAAAAAGAACGTTTGTTGTTGCCCTGATGATCTTTATT
CGTCATTTAGTATAAAGAATATTTTTTATCGTCTTAAATTTCATATCTTT
TAATTGTCTGACAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGC
AGGACTGAGAGCATGTCTAAAGGTACTTTAAATGTCATGTGAATTTTTAC
AAATTATTTGAGTTTTGAAGTAATTTCGCTGTAAGATCTTCCTCATTCTT
TAGCTTTCTGTTACCTGGATATACAGGTTAGTCTAAGTAAAAGTACCGTG
TCAGACAATTTGAGTAGAAAATATGTTTATCTTTTTCTATTTCTTATTTT
AAAAAATTCACTAGCAATCCAAACTGTAATTATTTACAAATCACAAGAAT
GCAATAATGGCACACAAAGAAAAAAAACTGTAAACGTTATCAATTTAATA
AAAGACACAGAGGAAAAAGGTGCCTTGAAACTGTTGTTGTTACCTACCTT
GTTGTTAGATAAATCTTCCATGATTTTATTTTACAGAAAGCTGGTCTTGA
TTACATTAAGGAAGAAGACGCTGATATAGTTTGTTTACAAGAAACCAAAG
TCACAGAAAAAGAAATCCCTGGAGAGGTATAATAGGTTTCAAATATTATA
TAGAAGTTGTTGATAAATCTTTCATGATTAAAGGTTTTAAGTCGGAATAC
CTTTCTTGTTCGGGAGGCCATTTTTTAAGATAATGGGCATTGCTTTGCAG
CATACCTTGAGAGAAGGAGTTTTTAGTTTTAATTTTAGCGGATACAGTAG
TAATGAATTTTGCAAGTTTTCAAAGCAATTCACCAAAATTTCTTCCATTA
GGGTAACTTCTCCTCTTTTCTATTTTGCCAAAATTAAAAAAAAAAACTTT
CTAATTAGGTGTCATTTTCTAACCTTCTTCTTTTAAGGTTACTCAATTGG
ACAAGAAAGTGCCATCTATACTACCAAAGAAAGACGGATATTACATGTAT
TGGTATGAGGCTGAGAAAAAAGGATATAGTGGTGTCAGGTATTGTTTTCA
ATGAAAATTACTCCTAGATCAGATCTCCTCACGAACATGATAAATTGTCC
TCAGTTAAATTGGTTTAGATGCTTCAATCCTCACATCTGTTATCAGCATT
ATACCTACGTCGATAATAAATGTTTTGAAATATTGTCTTTTTTTTGGGAT
TTTTGATCAATTTAAGGACCATTTTATTCTAAGAATGTCATGCCTAAGTT
AGATTTAAATGCTGTGAAACATTCTACATTGAAATTATTATTTCACACTT
CAGTTTATGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGGGTA
AAGAGGAACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGATAAA
TACTATGTTGTAACATCATGTAAGTGTTTTTTCACCGTTATGAGCCTTCG
TTTCAACTGATATGAGCCTCATGTTGAGGAATCATGACTAATGATTTTAT
CATTGCTTGGCCAAACAAGATTTCATTTAATTTTTATATGTCCCTGCTCA
GAAACGGAACAAATTTGAATTTTAATAAACGGCCGTTTATACCAATGGAG
GTCCTTTTAAGGTCCGGTGGTTATAAAGATACAGAAAGGTTTACAAACAG
GGGATGTGCTTTTTAGGCAACTGAGAATAATTCAGTACATCCTGCGTCAG
AATCATAAAATTTGTGACTTATTGATTGCTTGTAAAAATGTTTTTGTATT
TCTCTTTAGATGTGCCAAACTCTGGAAAGAAGCTAGTGAGGTGTTTAATT
AATATCATAGTGTCCTGTAATAAGCTGTATCTCTAAAACAGAATTTTTAA
GTTACAGCTATAGGTCGACAGGTTCCAGGTTACGGGTTGGAAAATTATAC
ATGGGTTAACTGACCAGATATAAGATATCTTGGGCTGGCAATTATGCTGT
TAAAGTATTTTTCAGCAATTTTTAGAGAAGGCATAACCACTCACCTCCTT
TTTTGTGGTATGCATGTGTTAAGTTTGTTTTAGGGCGTTTACAGTCCTGT
CAACTGCTTTTGCCCATTGAGGATTCAACTATTTCACATGTTTGTCCCTG
TGTCCAGCTTACTGAATATTTAAGATTTTTTTAAGAATTTTGTGGTGAGG
ATATCTATAATCAAGTGTTTTTGCTTGCTATCAAAATTATGGAAAGACCA
AATGGGATAAATTTTCGCGGGGATTAAATTTCGCGGTTGAGTTCATCCGC
GAAATTTTAAGATTTCGCGGGGATTAATTTTCGCGGATGAGGGATTTCCT
GATTTTTCGCAGGGATTTAATTTCGCGGATTGGGGTACAAATTAAAATTT
TTGAAAAGGGTCAAAACATTGAAAAAAAAAGGAAAATTAAGAATTTTTTT
TTCAAGTAATAAGAGGGTGTTTTGGAATAGGGCGAGGAGATATGTATTAC
AACTATCAAAAGTTGAATTTGAACTTCCATGGTGTTAAAAGAAGAAAAAG
AGAGATAAATAAAATGACTTAAAATTGTTGTTTCGTTATTTTCACTCTTT
CTTATCATTGAAAATAAATTCTTTTGTTTTCCGTTTTCCCTCTTTTTCTT
ACATATCCTTTTAAATGTTTAATTTCAAGCCAGTTGGATTACCCTCTTGC
ATTGAAAAGCTTTTAACAATAAGCGATCACTTTAGATAAAAAAATTTCCA
ATACCTTTTCCAAGTTTGTAAATTTGTGAAGAAAATTTTGAGGAAAACGA
TATCGAGGATTTGACCTTTTTCGAGGGTTGCGTGCCCTCATGTAGAAAAA
AAATAAAAAACGATAAAAATAGAAATTTCGCGGATTGCCAAAAACATTCA
AATTTTTCGCGGAAACTAATTTTCGCGGATGGGCCTTTTTCAAATCTCCA
ATGGGACTTATTTTCTCGGATGACACCCAAATCTGCGAAATCCGCGAAAA
TTTATCCCATTAAAGTATTATCTTCCTGTTAAATATTTTCTTTTAGACTT
GATTACAGGCGAAGTTGGAACACAGATTTGAAAGACTATTTGAATAAACT
AAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATTTAAATGTCGCTCACC
AAGAAATAGGTATGTGTAAAATGTGTTTTCATTTTGTATTACAAGCTGTC
ATTTGGTAAAAGATAAGCATAATGCTAAGCATCCCTCCAAGCTGAAATGC
AAAAAGATTGCAGCTTTTTAAAAACGCTGACCTTTTTAGGGTTACTTTTA
AAGCTGTTTGAGCTTTCTTAGACCAAAGATTTTCGCCTGCGGCGCCAAAT
TACAAAGAAAACCTTCATTCTTTGAGCCGAATCAATGTTCCGGCCTTTCG
AAATTTTCATGAACCCAAAGAAAAATCAACAAATCGAAGTCTAGGCATAT
AAATAAGCATGAATTAAGGCTGAAAATAGATTTTGCTAAGCATATTGAGC
CCCGACCCGATTTTCCCTTTGCTTATTAAAAAATGCGTGCTCCTTGACGA
GGCAGGGGGGTCGGTAGTAAAATCTCAGACATAATGACGTTTACTACGGT
GGTGGTGTGACAAAAAATCGAAAAAAACTTTTACTACCCAGGGCACTTAA
ATACCAAAATGGGTTGTATCTATGTGTTAAATGTTGAAAAGATTTTACTA
CCTGGGTAGTTAAAACTGGTAAAATTAGCAAATTTTAGCTTTTTGGGTTA
TTCTTTTAATTTTTTGGATGACTTTTCTGAAAAAATCTGAAAATTTTTAT
AATTTTAAAACATTTTCTGTTGGGAAGTTGTTTGCTGCAAACAAAAAATT
CTCGAAATTTTTTGTCAATATAAAAAAGAATTTAATTCTAAGAGCAAAAC
ATTAATTTTTGTACTAAGTGAAAAATGTGTCACAGAAATAATCATTTTTT
AGCTTTTTTTGTAAAATCAGTCCGAAAAGCAACCAAAAAATAGGTGGTCT
CCATGACAAATTGTCCCAAAAACTTTTACTACCAGGGTAGTAAAGTACAT
CTTCCAAGAGTCTGGGTGGTGGTATGTAAAAATTCGTAAAAATCCTTTTA
CTACTCATATATGTCTGAGATTTTACTACCGACCGGGGGAGGGGGTCGGC
CCCTGCTTGAGGCATAATTTTGATGAATACATAATTTTTGATGAACAACA
CATAGTTGGTTGGAAAGGTCGTGATTTCAATTTTACGAGAGTTACTTTTT
GCGAAATTTCGGGCATACGCTCCTCTTCTAATTTTGTTTATTACAACAAT
AAGGCTCAAAATGAACTATTTAAAAACAATGCCAAGCCTAGAATGCCTGA
ATTCTAATCAAAGAAAGGTCAAATCAGTAAAAATAGCCTAAAAAACCTCA
GTTTTCCCTAGAAGTGATAAGAACATCATAAGAATCATTAAAGGCTCAAA
CTTGCGAGAAAAAAAAAGAACAGCCAAGGCTCGCCAAAAACTTCCTGGTC
CTTATAAAAAATCCAACTCCAACATTGATTTTGGGGGGAGAAAAAAGGGG
GGGACTTGCCGGTGGAAAAAGGTCATCGGACACCAGTTTTGACCACGATT
GTATATCTTCTAATCTCTAGTAAAAACTGATCATCATTATGAAGTTGAAA
ACAATTCCTTTTCAGATATTGCCAACCCTAAAGCAAATAAGCGTAATTCT
GGATTCACTGATGAAGAACGAGGAGACATGACTGACCTCTTAAACGAAGG
TTACATTGACTCGTACCGCTCCTTATACCCTGATCAAGAAAAGATGTATA
CTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGAATGTCGGATGGTAA
GAGAAAATAATTAATTTTTTACCTGAAAAAGCAATCGACATAGATTGGAA
TAAGGACACTTTAGGGTTAATCTTTCGAATACTTTTCTTATCAAGTTTTG
TGCCATAAAAGAAGTAAGGTTAGGCGAGGTTAAAAATTTAAAAAAAATCG
CATATAATAATGTCCATTTGATGAAACTCGGTGCTAAGATATTGTGAGGG
AAACAATTTAAAAAGGTTTAGGTTAAGGTAAAAAGCAAATTTGGCAAGAA
GGAATGTTCTTCTTCACATTTAACATGCATAGATTCGTCCCTCTCCAGAG
GGTGAAGCTCTGACAAGGTTTCTCCAAGCTTCTGTTTTTCATGATGTTGT
TTAATTCTTTCTTTCTTTCTTCCAGTGTCTCCTAGTATGACGGTTTTCAA
AGTTGTAAAAGGTTTTTCAGTCTTTCTCATCGAGTCTTTACCACATCGAT
AGCTGTGAGGCGGGCTCTTCTCGGCGTGTCGTTGAAGGTACATTGCAGGC
AACTCTGGACATTATGTGTATTTATCATTAATGCTTGGTGGGCTCAAGGA
TAAAACTTAATGTGAATGTTTTCGAAAATGATTTTTAGGATGTTGATGCC
CTACTCTTCGCCGTTATAATTTTTGATTACTGTTTGGGGGCCGTCCCTGG
CCGTCCATATAGTACGTACGCAAAAATTTTCCAAAAATTTGATATTAATT
TCTACCAATAACAATCCTAATGTTCTTCTCCTGAAATCTCTATAATAATT
TACTGTTTTCGGAATTCAATCTGCGAATATCATTCTCTCTTTTTTATCAC
ATTCAGGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGACC
TATGCGATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTCCT
ATAGTTGCTACTTTTGCTATAAAGTAA Coding sequence (CDS) from alignment at sc0000080_pilon:906754..913430- >XLOC_037500 ID=XLOC_037500|Name=XLOC_037500|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000080_pilon:906754..913430- (Clytia hemisphaerica_ch_hm2_pilon)
TCTCGACAGAGCACTGAAGGTGAACAGGCAGCCAGTAAAAAGTCCAAAAA
AGAAGATGAAAAGGTTGATGAAGTTTCTCGACAGAGCACTGAAGGTGAAC
AGGCAGCCAGTAAAAAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTT
GAGAAAGAAAACGATCAAAAGGAAAACTTTTCTCTTGTTACAAAAACTAA
AGATGGAAGGAGAAAGAAAACGATCAAAAGGAAAACTTTTCTCTTGTTAC
AAAAACTAAAGATGGAAGGGATTCAAATTTGAAGATTTGTAGTTGGAATG
TAGCAGGACTGAGAGCATGTCTAAAGGGATTCAAATTTGAAGATTTGTAG
TTGGAATGTAGCAGGACTGAGAGCATGTCTAAAGAAAGCTGGTCTTGATT
ACATTAAGGAAGAAGACGCTGATATAGTTTGTTTACAAGAAACCAAAGTC
ACAGAAAAAGAAATCCCTGGAGAGAAAGCTGGTCTTGATTACATTAAGGA
AGAAGACGCTGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAG
AAATCCCTGGAGAGGTTACTCAATTGGACAAGAAAGTGCCATCTATACTA
CCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAAAAAGG
ATATAGTGGTGTCAGGTTACTCAATTGGACAAGAAAGTGCCATCTATACT
ACCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAAAAAG
GATATAGTGGTGTCAGTTTATGGTCAAAAACAAAGCCAGTCAGCATAAAG
AATGGAATGGGTAAAGAGGAACATGATAATGAAGGACGTCTGATTACTGC
TGAATTTGATAAATACTATGTTGTAACATCATTTTATGGTCAAAAACAAA
GCCAGTCAGCATAAAGAATGGAATGGGTAAAGAGGAACATGATAATGAAG
GACGTCTGATTACTGCTGAATTTGATAAATACTATGTTGTAACATCATAT
GTGCCAAACTCTGGAAAGAAGCTAGTGAGATGTGCCAAACTCTGGAAAGA
AGCTAGTGAGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAGAC
TATTTGAATAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATTT
AAATGTCGCTCACCAAGAAATAGACTTGATTACAGGCGAAGTTGGAACAC
AGATTTGAAAGACTATTTGAATAAACTAAAAGAAAAGAAACCAGTTGTCT
TTTGTGGAGATTTAAATGTCGCTCACCAAGAAATAGATATTGCCAACCCT
AAAGCAAATAAGCGTAATTCTGGATTCACTGATGAAGAACGAGGAGACAT
GACTGACCTCTTAAACGAAGGTTACATTGACTCGTACCGCTCCTTATACC
CTGATCAAGAAAAGATGTATACTTTTTGGACGTACATGGCAAATGCAAGA
GCAAAGAATGTCGGATGATATTGCCAACCCTAAAGCAAATAAGCGTAATT
CTGGATTCACTGATGAAGAACGAGGAGACATGACTGACCTCTTAAACGAA
GGTTACATTGACTCGTACCGCTCCTTATACCCTGATCAAGAAAAGATGTA
TACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGAATGTCGGATGGC
GTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGACCTATGCGAT
AGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTCCTATAGTTGC
TACTTTTGCTATAAAGTAAGCGTATCGATTATTTCATTCTATCGAAATCA
TTGGAAGAAGACCTATGCGATAGCATCATGCGTACCAAAGTTATGGGTAG
TGACCATTGTCCTATAGTTGCTACTTTTGCTATAAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:906754..913430 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 832-951:121 |
| Aaloc | 652-828:1111 |
| Aaloc | 538-648:2731 |
| Aaloc | 508-534:3967 |
| Aaloc | 391-504:4424 |
| Aaloc | 289-387:4791 |
| Aaloc | 199-288:5192 |
| Aaloc | 142-198:5613 |
| Aaloc | 82-138:5860 |
| Aaloc | 7-81:6678 |
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