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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:837558..842168- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037494 ID=XLOC_037494|Name=XLOC_037494|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4611bp|location=Sequence derived from alignment at sc0000080_pilon:837558..842168- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGGTGCAATAAATTCCAATCAAAAACTGAATAGCCATCACACTAG
CAAAGGTGCCAAGCAAGGTAAGTAATTTTCTTTACTTTCAGCTTCTTTTT
AACCTATCCGAATCATCATATATAATGATTCAAAGTGCCGTAGGAAGTGT
TTTGATATTGGGGTGGCTGAAGTTTACTGACACCGCAAGGGCGGGCCAGA
AAAGAGGGAAATTTATCTTGGATCCGTTAGGACACCCCCTGCTCACAGAA
CCATTGAGACCCCTAAGTAAATCATCACTGCAGAATATTGTGTTATTTTT
CAAACCCCCACTGAATTTTCCGGCTCGAGAACATTGGAATTCAAATCCCC
AGCCATAAAAAGCATGGGAAATCGATCACCATCGAGTTTTTTGTCCGTTA
TTTTTAACTCCCACTGGCTGGAAAAATCCTACCGGATCTGTGAGAAGGGG
GTGTGTTAGTTGCTTGCTTCCTCTAACGGATACGATCAAATTCGTGCCTG
GTAATTCTCAAGGGTTAAGAACTTACTATATTCTTTCTTTTCAGTATGTC
TTCAAGATTTCCATATACTAAGATCAGTGGGCAGAGGTGCATTTGGTAAA
GTTTGCATCATACAGAAGAAAGATACTAAACATTTATATGGATTGAAATA
TATGTCAAAACGTGCTATTATAGAACGTTCGGCCAGTAGAAACGTTTTAA
AAGAAGTTGAAATTTTAAAAATGTTACATCATCCATTCCTGGTGAATATG
TGTTATTCGTTTCAAGATGACGAGGATATGTTTATGGTTCTGGACTTAAT
GTTGGGTGGTGATTTAAGATACCATTTGAACCAAGGACATTTGTTCTCCG
AGGAAGAGATTGCATTGTATATTGTTGAGATGGGATTAGCGCTGGATTAT
CTGCACAGTAAACGTATACTCCACAGGTGAATATAAAAACTATTCACACA
TGTTTTTTAAATAAGAACAATTCTGGTTTAGAACCTAAGAACAAATTAAG
AATGATTGGATCTTCTCTCATTTTATTACTAAGAAAAAAGTTCTTATAAA
AATACACGCATCTTTTTACATGAGAAACAGAAATTCTTAAAACCTCCGGT
TTTGAATTCTTAAGCCTAAAAATACTCTTAAACATGTACTTTTTACACCA
TTTTTAGAGTACTTTTAAGCAACTTTCTAAGCAAATCAGAAAATTAGAGT
CCGCAAAGTCTTAAAATGTTCTTACTAGTCCTTGATGTTATAGCCATAGA
AGCCTTATGTTCTTGTACAGTTCTTATATAAAAAAAGCTTTTGGCATGTG
ATTCAAGACACACACATGACTTTTTTTCATACCACTCACAAAATTGACTT
TTTATTGGACTTGAGCCAAACAAATCTAAAATATTGTTGCCCCCTTAAGG
CGTTGATGTATATTTAATGAGTCCATTTTCTCACACACAATTCAAATTAC
CTCTTTTTCTCAAATTAATAGCCTACCATATTATTTTCTTTTTTTAGAGA
TATCAAACCCGACAATGTCCTTTTAGACTCCAATGGTAAGAACTTCTAAT
TCACGCTTTTTTATATGAATTGTGTTTTCCATTTCATCATGGATCTAGTC
TAAACTTTTAAGGGAAAATTCATCTAAAAAAATCTAATACGGTATAAATT
AGGGTTAGGATCCAAATTCAACCTAAATTTAACATTACCTCAAACGAAAA
ATATGGCATTTTTGTGAAAGTCTTAATTTCTAGTGTTAATTGTCAATATA
CAGGTATTCTTGGGTTCAGTTGCTAAATTTCATTGAATTCTTAGCATATT
CTTAAATGTACATTCTATTTCTTCCAGGCCATATCCATCTTACAGATTTC
AACATTGCCACATACGTTCCCGAAGGGAAGATTGCAATATCTTTAAGTGG
AACACGACCATACCTTGCACCTGAAGTATTCTTATCAAGTATCGGCAAAG
TACCAGGTTATTCCTTTGAAGCTGATTGGTGGAGCTGGGGTGTCACGCTT
TGTGAACTCGTCCGTGGAAAGGTGAGAATGTTTATTTTGATAGTTTGTAA
TTTACTCGAGTGTTTACTAAAAAAGACATGAAATCGCAGCTTATCTAAAT
TCATTTCAAAGAGACCACCTTTTGATTTGGTGTAATGGCCAGTGGATCAA
AATTCTCAAAATAACGCTCATCCGACGTTCATAATAGCTTTTTGTCATTA
GTAAAGTAGTAAAAAAGTTTATGACTATACATCGTGGACGACCCGCAGGC
TCCCTTTTCTTTAGCTGTCTATCAAATGTAACAAATGGGAGAGCTCCATA
CCTTTGCCAGAATTTTTTTTGATTTTAAGTTTTATTTTTCTCCTTACAGC
GTCCATTCCACATCAGTTCATCAAGCAAAATCGAGGCAACCTGTAAACTT
TTCGAAAAAGACTTGGTGATTTTGATGCCAAGCAACCTGTCGGTATCCAT
GGTTACATTACTAACAGATCTTCTACAGACAAATCCAAGGAAACGTTTAA
ATTCATTACAAAAACTGAAAAACTATCAAGCGTTGAAATGTTTAGATTTT
ACTAGTGTTGAGAAACAATTAGTTGCAGCGAAATTTACGCCGAGTAATGA
TAGATTGAATTGTGATCCTACATATGAATTGGAAGAAATCATGATCGAAT
CGAGACCGTTGCATAAAAAGAAACGCAGGAAAAGAAGGAAAAGTAATGTA
AGTATGTTTAATGCTTAAGTACACGTTTTTTATAAGAGCAAACTATATAA
GAACATAAGAACAAGGCTTCGATGGCCAAAATGTTAAGAGCAATTTAAGA
ACATTTTAACGCTTTGTGGACTCTAAAACATCCGATTTCTTAGGAAAATG
GATAAAAATACTCAAAAAATGGCGAAAAGTTAAAGAACATTTTTAGGTTT
AAAACTCAAAAAGTTAACATCCCAAGGCTTCAAAAATTTTGAAAATAGGT
ACTGGGATCACAGATTTCTGTAATGCCCGAAGGGCTAGATGTCGTGCTTT
AAGCTTTTACAAGCAAAAAAAAGTGAATATCGCAAAAAAAAATATTGCTG
CTATTTTCGAAAACCAGGGCAGCTTCTGATAGGTCAAGTGGCGAAATTCT
ATTGTAATGTCACGTGAACTCGGTAGGATTTTCTACCGAAATACGGTACA
CTTTTAAACCAAAGCACGACATCTAGCCCTTCGGGTTTAATAAATCTGTG
ACTGGTGTGATGCTAACCATCAGGATACCTTTTTTTCAGTGAGGTACTTA
GTTTAAAAAAAAATCAAACATAGGTTCTCATATAAGGGCTTGTTACGGAA
AATTTGAAGAAATACACATGTTGCAAAATTAAAGTCTAAGGACAAATCAC
GCTTTTACTCGAAATTTTTATGCGCTTGTTACATGACATTCATTTCTGAT
TGGTTGGAATTTATTGACACTAATGAAGTTATCAGCTGTAAGTTGTAAAG
CAAGTAACATGGGAATAAAATCACGTGAACTTTTTCGAGTAATCACATGT
TTTGACTGCATTGATATAATTTTGCAACCCGTGTATTGCTCTCTAAAATG
GTAATTGTTCGCCTTCAATATTGAAGAAGAAAACTGAATTTATCTTTAAA
ACTCATTTCCAATTTTCAAATGTTTCATTGAATTGCACAAATTATACTCC
AATTTAAGCCATTAGCCAACACTTCATCTACGATGAGGAAGTTCATTTTG
TGTAATGTTAGAGCAATATATTTTTACCGTCTGGTCTGGTCTACATATTT
TCGATATGGGAAGTCTAAAATATTGTGAAAATAGCAATATGTGTTTTATA
TTTCCCTGATTTGTTAAAGCTTTTCAGCTAGAAAAAAACCCTTGATTTAG
TTATTTAGATATTTTTTGATACCACCATTAGGCATTGAGGCGACGTTGAA
ATTAAAACCAACACAAAACTATCCCAAGACAAGAAATTCACTTCTTCTTC
GGCACCTATCACCATGCTATCACACTTAAGAGATATTAAAATGTGTTTTT
TATGCTGTCTACACGCCATAATTTAATACAAAATATAACGGATTTATTTT
TTTCTAAATTTTTTAGACTCCAATCATTCCATCGGATGATCCTGTCGTCC
TTTCAATACAAAATTTGACCAATAAATTTACTTCATTTCAACGGGGAAAG
TAAGTAAAAGTAATTTAGTAGCTGCTAAAGTATGTTCATTTTTCCAGTGG
TGCGCGTACTCAAGATATTGAGATTGCGCAAACAAATTTTAATATACTCA
AAGCACTCTGGAAGTGATGAAGTGATGGAATAATCTTTAATCAATGCGAT
ATATTTTGAGATCAGTCACCGATTGACGTATTTTTCTTGACTGTTGGATC
TATCTTTGACTTTTCTATTTTACAATCAGTATAAATTGAATAGTATCTTG
GCGTTATCTCGGCTAATAACTTCAATATTCCAGTAATGTCTGACGATATG
AATTTCAGTCACATTCCTAAGAGTAACTCATTATATTTTATTCTTCTTTC
TCTCCCCCCTTTAGTTTCAATTCATCGGAAGATATGTCAAGTGAAACGCT
GGAGATTTTGTGTGGTGTGAAGCGCTCACCCAGTGGTACACCCCTTGATG
AAAGCACGTGA Coding sequence (CDS) from alignment at sc0000080_pilon:837558..842168- >XLOC_037494 ID=XLOC_037494|Name=XLOC_037494|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2418bp|location=Sequence derived from alignment at sc0000080_pilon:837558..842168- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGGTGCAATAAATTCCAATCAAAAACTGAATAGCCATCACACTAG
CAAAGGTGCCAAGCAAGATGATGGGTGCAATAAATTCCAATCAAAAACTG
AATAGCCATCACACTAGCAAAGGTGCCAAGCAAGTATGTCTTCAAGATTT
CCATATACTAAGATCAGTGGGCAGAGGTGCATTTGGTAAAGTTTGCATCA
TACAGAAGAAAGATACTAAACATTTATATGGATTGAAATATATGTCAAAA
CGTGCTATTATAGAACGTTCGGCCAGTAGAAACGTTTTAAAAGAAGTTGA
AATTTTAAAAATGTTACATCATCCATTCCTGGTGAATATGTGTTATTCGT
TTCAAGATGACGAGGATATGTTTATGGTTCTGGACTTAATGTTGGGTGGT
GATTTAAGATACCATTTGAACCAAGGACATTTGTTCTCCGAGGAAGAGAT
TGCATTGTATATTGTTGAGATGGGATTAGCGCTGGATTATCTGCACAGTA
AACGTATACTCCACAGTATGTCTTCAAGATTTCCATATACTAAGATCAGT
GGGCAGAGGTGCATTTGGTAAAGTTTGCATCATACAGAAGAAAGATACTA
AACATTTATATGGATTGAAATATATGTCAAAACGTGCTATTATAGAACGT
TCGGCCAGTAGAAACGTTTTAAAAGAAGTTGAAATTTTAAAAATGTTACA
TCATCCATTCCTGGTGAATATGTGTTATTCGTTTCAAGATGACGAGGATA
TGTTTATGGTTCTGGACTTAATGTTGGGTGGTGATTTAAGATACCATTTG
AACCAAGGACATTTGTTCTCCGAGGAAGAGATTGCATTGTATATTGTTGA
GATGGGATTAGCGCTGGATTATCTGCACAGTAAACGTATACTCCACAGAG
ATATCAAACCCGACAATGTCCTTTTAGACTCCAATGAGATATCAAACCCG
ACAATGTCCTTTTAGACTCCAATGGCCATATCCATCTTACAGATTTCAAC
ATTGCCACATACGTTCCCGAAGGGAAGATTGCAATATCTTTAAGTGGAAC
ACGACCATACCTTGCACCTGAAGTATTCTTATCAAGTATCGGCAAAGTAC
CAGGTTATTCCTTTGAAGCTGATTGGTGGAGCTGGGGTGTCACGCTTTGT
GAACTCGTCCGTGGAAAGGCCATATCCATCTTACAGATTTCAACATTGCC
ACATACGTTCCCGAAGGGAAGATTGCAATATCTTTAAGTGGAACACGACC
ATACCTTGCACCTGAAGTATTCTTATCAAGTATCGGCAAAGTACCAGGTT
ATTCCTTTGAAGCTGATTGGTGGAGCTGGGGTGTCACGCTTTGTGAACTC
GTCCGTGGAAAGCGTCCATTCCACATCAGTTCATCAAGCAAAATCGAGGC
AACCTGTAAACTTTTCGAAAAAGACTTGGTGATTTTGATGCCAAGCAACC
TGTCGGTATCCATGGTTACATTACTAACAGATCTTCTACAGACAAATCCA
AGGAAACGTTTAAATTCATTACAAAAACTGAAAAACTATCAAGCGTTGAA
ATGTTTAGATTTTACTAGTGTTGAGAAACAATTAGTTGCAGCGAAATTTA
CGCCGAGTAATGATAGATTGAATTGTGATCCTACATATGAATTGGAAGAA
ATCATGATCGAATCGAGACCGTTGCATAAAAAGAAACGCAGGAAAAGAAG
GAAAAGTAATCGTCCATTCCACATCAGTTCATCAAGCAAAATCGAGGCAA
CCTGTAAACTTTTCGAAAAAGACTTGGTGATTTTGATGCCAAGCAACCTG
TCGGTATCCATGGTTACATTACTAACAGATCTTCTACAGACAAATCCAAG
GAAACGTTTAAATTCATTACAAAAACTGAAAAACTATCAAGCGTTGAAAT
GTTTAGATTTTACTAGTGTTGAGAAACAATTAGTTGCAGCGAAATTTACG
CCGAGTAATGATAGATTGAATTGTGATCCTACATATGAATTGGAAGAAAT
CATGATCGAATCGAGACCGTTGCATAAAAAGAAACGCAGGAAAAGAAGGA
AAAGTAATACTCCAATCATTCCATCGGATGATCCTGTCGTCCTTTCAATA
CAAAATTTGACCAATAAATTTACTTCATTTCAACGGGGAAAACTCCAATC
ATTCCATCGGATGATCCTGTCGTCCTTTCAATACAAAATTTGACCAATAA
ATTTACTTCATTTCAACGGGGAAATTTCAATTCATCGGAAGATATGTCAA
GTGAAACGCTGGAGATTTTGTGTGGTGTGAAGCGCTCACCCAGTGGTACA
CCCCTTGATGAAAGCACGTGATTTCAATTCATCGGAAGATATGTCAAGTG
AAACGCTGGAGATTTTGTGTGGTGTGAAGCGCTCACCCAGTGGTACACCC
CTTGATGAAAGCACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:837558..842168 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1114-1209:97 |
| Aaloc | 1030-1110:546 |
| Aaloc | 682-1029:2263 |
| Aaloc | 490-681:2783 |
| Aaloc | 451-486:3114 |
| Aaloc | 70-447:4066 |
| Aaloc | 1-66:4612 |
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