|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:782108..788465- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037490 ID=XLOC_037490|Name=XLOC_037490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6358bp|location=Sequence derived from alignment at sc0000080_pilon:782108..788465- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTCAATGAATTACCTAATGAACTGCTGAAAACAATCATCACATT
TTTGGATATTAAAAGTGCAAAAAACATTGCATCATGCTCCGAGCGTATGT
ACGACCTGGCTTTAGATCGAATTTGGTCCAAGCCACGCTTCCGAGGTGCC
AAAAAACGAAATTCATTTTTCGAAAAGATTAAAAAGTTCCCGATCCAAGA
ACTTCACACGGAAGATTTCCTTTGCAGATGGGGGAAAATTGCTGAAGTTT
TTCCAGATCTCAAACTTTTGCATATCGATGGTGAAGGAAGAAAGGAGCCA
CATACATTTCCAAAAGTTGTTGAAATTCGTAAGATCAAGGTCCCTATGGC
TCTTTACTCGAAGCTATTTAGAGTAACAGACGACGATATGCAAATGCGAT
TCTTTTTGGAGAAAGGTTTAACATATAAATATATTTCCCAACTGGTTTTT
GAGGAAGACGTCAACGCTGGTGAAACAATAGTATGGTCGCTTGAAGCTTT
TAAACTTGCTGCCAAGTTTTATAAAATATCCCATCATGGACCATCACTTC
AGGATTGCTCCCAAAGGGATAGAGAATGGTGTGATATTTCGGGAAATTTG
CGATCGTTATCCTAATGCTGCTTGTGGATGTGTGAATATGGAAAAATGGG
TACCCTCCCTAGGAAGTGACATTCAGAGAAGGGATAAAATTAAAAAGGTT
TTGTAAAATTTGGGTGCAAATACGGAAAATAATTGAAACTTGAAAGGAAT
ATGAATCATAATTTTATCCTTATATTTTTATTCAGTTTTTCTTATGCTCG
ATCCCTGTAAGAAAATTTTCTTGCGCCTATTGTAAGATATCACATCATCC
AGTATCCAACCAGGATTACTCCGGGTAGGATAAAGTTGGTGTGATATTTC
GGGACATTTGCGATCGTTATCCTAAAACAGCTATGTAATTTGTAAAATAT
CAGTGGATGAAATTGATGGACCCCTCAAAGTGTTCGAAATTATGTAAAGT
TTTGGATTTTTTGAGGTTTCGAAGTTTGTTGAATATGATATTTTTCAGAG
TTACATCATTTTTGTAAATGAAGTATTTTGTGGAGCATGTAAAAATATTT
TATTTTAATCCGCTTTTGGAAAAGTCCCAAGGTCAAGAGAGTTAAAAGTG
AGAATATGTCGAGTCTATGTGAAAAAATTGAAAATTGAAATAAGAAAGGA
ACCTTCTGTGTTCTGGAGGTGGAGTATGCACAATATTTGCATATTTATTT
GGTTGACTTGAGAGCCCCAAGACTGTGTAACTGAATATAGCTGTGAAAGA
AAAAATCTGGTAGAATGTCTTTGGGGTGAGAATAGACTAGAATTGCAGAT
TTTATGCAATGAAGACTGCTGTAGCAGAAGATCTCTATTGTTAAAATGTG
AAATTAAAATGAACAACGGATGAGATGGAGACACCCCCACCAAGGGGGTG
CCTGGAGACAGGTGCGGATCCTGGAGTAAGCTCTCCTTGCCACTCTAGAG
TCACCCACCATCTCATCCTGGCAAATTTGTTTCTGTAGTGCTGCAGCCAC
TACAGTGTGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAATTTGATTGATTGATTTGCTACTT
GATTGATTGGCTATTTGATTGATTGGCTACTTAATTGATTTGCTAATTGA
TTGACAGGTTGGATGACATGTATCAGAGATGTTAAATCAAAAATTGATTT
TATTACTTCAGATTTGTATATGAATGATTATCATTGTTTTATCATTGAAA
ATGTGTCAAAGAGACATAAATGGTGAAAATCAAATAAGTAAGCTTCGTTG
TGAAATGGTACTTGAGCAGGTTTTGAACCTTAGACCCTCAGATTCCGATG
TGTGAAAGTTACCCATCCACTGCACCATCAGGCCTCAAAAATACGTTAGG
AAATTTTTTATTACATTATTTCTACAAATGGCGAACGCCCCCTGAATGTA
TTATTATCAAAATAAAGAAGTTTATGAATGGTGGAATAATAGTAAATTAT
AGTAGAGAGAAATACTCTTACGTTGACTTGGCGATTGTCAAGATAATAAA
TAATGACCAACGAGCGACAGCAACAGCAGCCAAAAACGGTGACGATAGAA
TAGTAAAAAGTGACAACGGTGATAATAGAATAGTAAAAAGTAGAAAATGA
CTTTAAAAACGATTTGATGGCTTTTTCACTGGCGTGGATGCTTTTTGCAG
GTTTTGTGCAAGTGAGTGATAGAAATTGAAAACAAAAAAAAAATTATTTG
TATTGGATGTACCATTTATAAACAGAAACCAAGGAAACGAAGGAAATGAA
TATACTGCAATGTCCTCTTCTACTTTACTGTTGTTGCATTTTCCCGTAGC
GAATTCCAGGAAGTTGTGGGTCGTTTGGGAAAACTGGACGGAAGTAAGAG
TGAAAGTGATGGTAAAGTATTGTTAGTGTTGTTGTTTGGAGTAAATTGGG
ATTGGAAGTGCTCTAGACCGTGCTCTGGTGCCGTTTAGATTTGGACTTTG
GTCTTATGCTGAAAGAAATCAAGAAGGGAAAATAAAAAGGGAGAAATCGA
AAGTGAAAGGAGGGAGTGGCAGAAAAAATGTTGAAATAGAGGTCAGGATG
ATTTAGGATTGACAGAATATGGAGTGTGTGAATGACCAGAATATAGTGTT
GAAGTATAACTATTTGGAGTAAATTGAGATTAGAAGTATCATAGTGGGGT
TCGAACTTGCTGTGCCAGAGGAAATCGAGAAATCGAAAGTGAAAAAGAGA
AATCGAAAGTGGAAGAGAGAAATCGAAAGTGAAAGGACTGCAATCCAAGA
TGGCGAGGGGATGTAGAACATGGAGTGTGTGGAAGACCAGAATTGTGCAT
TGGAGTGTTGCTATTTCGGAATCCTGACAGTTTGTCAAAGTTGTCCTGGT
GGAGTTCGGACGTGTTGAAAGGGATTGAGAAATCGTTAAATCGAAAGTGA
AAGGAGGAGTTCGAGTGAGAATGAAAGAAGGTTGCAACAGAGGCCAAAAT
GATGAGGGGTCAGCAGAGTGCGTAAGACCGGAAAATATGGTGAAAGAGTG
TGACATGGGTCACTGATTGGTATCGAACCCAGGCGATAGCGGTGAAAAAT
CCGACCGAGACCAACTGATTTTCACGTAGGGTACTTAGACAAAGATGGCG
GGACAAGGGGGGACAACTTCTTTGTGTTGGGAGGGAGTGGAAACTTGTAG
GTATGTAGGAGAATAGTATGAAGCTTGAAAATTTAGTAGTAGAAAGGATG
TTTGATCTTTCTTCTGGTTTGGAAATTATCGATAAGATGATTATAAATGG
ATTGAAAGAATGAAGTATATAACATAATTAGGTTGACAAAATAAATAATT
TTTAGGTCAAATGCCTGGTGATGTGGCTGTTGTTATAAATAAGTGTTATT
GATAATTATTGTAACAACTTGGTTGCAAACAAAGAGGCTTTTCGGAATAC
AAAGCAATAATTATGTTTCGTGATGTGAGGCAGATCTAATGACATATCTG
TGTGAAACCCAAGGGCAGTAAGAAACAATGAAAATGAGAAGCTATTTTTG
ATGTTCCTTAGATGGAATGACCAAACAACAAACAAAAAATGATAGTCTGG
GGAGGATTAGAGCCTGGTCCGACGTGATCAAATGAGTAAGTGGATATGTT
TGCAATCAGGCATTTATAAAAATGTAATGAAAACTTTAAAACTTTATTCT
GGAGCTCTCAAATTTTTGTATCAGAGGAAGTGAGTTTAGTCCCTAGCGTC
TTGTTGTTTTTGTACACAGTGGTGGGTCTTTTAAGGATATTTGATAGATC
AGCGTCCTGTTCAATTGTTGACCAAGCATCTTGGATTTTGCTTTGGATGT
TTTTGTCTCTGTCATTGTGGAGGATGAGCGGTAGGATGTTCTTATTTTCA
TGTTGTTTGTTGTCGTATAATAGGTTATGTCTGGTCTTGGTGAGCGCTTT
CTTGATATTGTCGTTGATGATATGGAGAGGGTAGCCACGGGCTAGGAGTA
TTTTGGATAGGTTGTGGAGTTCATTGGTGAGAGTTTGAGAATCACTGATA
ATCATGTTGTAGCGGAGGGCTTGGGAGTAGACAATACCTTCTTTTGTGTG
TAAAGGGTGGTTGGATTCAAAATGAAGGAGTTGAGAACGGTCAGTGGGTT
TCCGGTAGATGCTTGTGGAAAATTGGTTGTTGGAAATGGTGATTTGGACA
TCTAGGAAATTGATAGTGGTTGGTGATTGATCAAAAGTGAATTTTATGGT
GGGGTGTAGTAAGTTCATGTATGATTTAAGTTCTGCCAGTTCTTCGTTGC
TGCCTTTGAATATTATAAAGATATCATCTATAAAACGTCTCCATAGTAAA
ACGTTGTTGGTGAATTCATTGATAATTTGTGTCTCTATTTTACCCATGAA
CAAGTTGGCGTATTGTGGTGCGTAGCGTCCCCCCATTGTCGTGCCTGATT
TTTGTAAATAGTGCTTGTCCATAAATCTAAAGTTGCTGTTAGTGAGGATT
GTGTCCAGTAGGATTTTGATGGTAGTGGTGTTTGGAGCGTGGTCTGGTAG
TAGTCTTCGGTGATCAGTGTAGTACTCTGTTGTGGTGTTTAGTCCTTCGT
CATGTGGGATGTTGGTGTAGAGAGATGTCACGTCAGCTGTTATCATGGTG
ATGTTGTCTAGTGGTTCGTTCCAAGTGTCTAACAGTTGTAGGAAGTGTTT
GGTGTCTTTCAAATATGTAGGGAGGGATTCCACCAGTGGTTGCAGATAGT
GTGCAAGATAGCGTGATAGGTTGTCTGTGGGGCTGTCAAATCCGGATACT
ATTGGGCGAAGGGGATTGTTGGTTTTGTGGATTTTAGGTAGGCCGTAAAA
AATTGGAGTTCTTGGTTGGTCAGGGGGTTGGAGGAATTTAGCGGTGGCGT
TGTCGATATAGTGTTTGAAAGTGAGGTATTGGATTGTTGTGCGTACGTCA
TAGGTAATTCGTTGGGTTGGGTCGTCTTCTAGTTCTTGATAGGTGTCCGT
GTTGTTGAGGTGTTCTTTGTTGATTTTGTCAATGTAGTCTTTTTTGTTGA
GGATGACCAAACCTCCTCCTTTGTCCGCTTTCTTTATGATGATGTTGTGG
TTGTTTAAGAGAGAGTTGTAAGGTGTCAAGATATGTCTGTGCTGTCTTTG
ACGATCGCAAATGTCCCGAAATATCACACCAACTTTATCCTACCCGGAGT
AATCCTGGTTGGATACTGGATGATGTGATATCTTACAATAGGCGCAAGAA
AATTTTCTTACAGGGATCGAGCATAAGAAAAACTGAATAAAAATATAAGG
ATAAAATTATGATTCATATTCCTTTCAAGTTTCAATTATTTTCCGTATTT
GCACCCAAATTTTACAAAACCTTTTTAATTTTATCCCTTCTCTGAATGTC
ACTTCCTAGGGAGGGTACCCATTTTTCCATATTCACACATCCACAAGCAG
CATTAGGATAACGATCGCAAATTTCCCGAAATATCACACCATTCTCTATC
CCTTTGGGAGCAATCCTGAAGTGATGGTCCATGATGGGATATTTTATAAA
ACACATGGTCGCTTGAAGCTTTTAAACTTGCTGCCAAGATAACTTTCATT
TCTAAAGTTCAAGTGAACTGCCTAGACATCCAAAGTAGTTGTGACTTGAA
TGACTTTCTTGATGACATATCAATGAACAAGAAAACAGAGCTTCACTTGC
CGGCAATGAAGTATGGCATGTATAAATTTACTCGTCAAGATATTGAATCA
ATTGTAAGCCGAGATATAAGAATTGTTAGCATCGATAGCAATTCTTTGAG
TTTTGACGACACAAGTTCAGGGTTTGAACATTGGATTCCCATTCTAAACA
AATTGAAGTATTTAGAAGAATTCATTTTGAATCATCCTGTTTCCTTTCAA
GAAGAACTACCTCCAATCTCTTTACTGAAACACTTACCGATTCGAAAGAT
GAATACAAGTCATTTTAATTTCCATAAGGAAAGCATTCAAAATGTTGTTA
AAACAATGCTGAAAATGAGACATCTGGAATCGGTTATTATTGATGAAGCC
TCCAATTGGCACTGGGAATATAAGTTTTCACCTGACGAGATTCTCTTATT
CAAATCTTTACCAGTAAAATCGGTTAGTTTATACGCATTGAATCTAACCA
AAGAAAATGTTGAAATATTTCGTCGGATCATCTGTGAAATCATGGAAATT
GAAACGATCAAAGGATTTGATCAATTTGGTCGTTGTGAAGAGACTAAAGA
ACTTGGCATTTCCAAAATCATGTCACGTGGACCTTTTGGAATCTTCAAAA
GTATTTAA Coding sequence (CDS) from alignment at sc0000080_pilon:782108..788465- >XLOC_037490 ID=XLOC_037490|Name=XLOC_037490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2472bp|location=Sequence derived from alignment at sc0000080_pilon:782108..788465- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTCAATGAATTACCTAATGAACTGCTGAAAACAATCATCACATT
TTTGGATATTAAAAGTGCAAAAAACATTGCATCATGCTCCGAGCGTATGT
ACGACCTGGCTTTAGATCGAATTTGGTCCAAGCCACGCTTCCGAGGTGCC
AAAAAACGAAATTCATTTTTCGAAAAGATTAAAAAGTTCCCGATCCAAGA
ACTTCACACGGAAGATTTCCTTTGCAGATGGGGGAAAATTGCTGAAGTTT
TTCCAGATCTCAAACTTTTGCATATCGATGGTGAAGGAAGAAAGGAGCCA
CATACATTTCCAAAAGTTGTTGAAATTCGTAAGATCAAGGTCCCTATGGC
TCTTTACTCGAAGCTATTTAGAGTAACAGACGACGATATGCAAATGCGAT
TCTTTTTGGAGAAAGGTTTAACATATAAATATATTTCCCAACTGGTTTTT
GAGGAAGACGTCAACGCTGGTGAAACAATAGTATGGTCGCTTGAAGCTTT
TAAACTTGCTGATGGATTTCAATGAATTACCTAATGAACTGCTGAAAACA
ATCATCACATTTTTGGATATTAAAAGTGCAAAAAACATTGCATCATGCTC
CGAGCGTATGTACGACCTGGCTTTAGATCGAATTTGGTCCAAGCCACGCT
TCCGAGGTGCCAAAAAACGAAATTCATTTTTCGAAAAGATTAAAAAGTTC
CCGATCCAAGAACTTCACACGGAAGATTTCCTTTGCAGATGGGGGAAAAT
TGCTGAAGTTTTTCCAGATCTCAAACTTTTGCATATCGATGGTGAAGGAA
GAAAGGAGCCACATACATTTCCAAAAGTTGTTGAAATTCGTAAGATCAAG
GTCCCTATGGCTCTTTACTCGAAGCTATTTAGAGTAACAGACGACGATAT
GCAAATGCGATTCTTTTTGGAGAAAGGTTTAACATATAAATATATTTCCC
AACTGGTTTTTGAGGAAGACGTCAACGCTGGTGAAACAATAGTATGGTCG
CTTGAAGCTTTTAAACTTGCTGCCAAGATAACTTTCATTTCTAAAGTTCA
AGTGAACTGCCTAGACATCCAAAGTAGTTGTGACTTGAATGACTTTCTTG
ATGACATATCAATGAACAAGAAAACAGAGCTTCACTTGCCGGCAATGAAG
TATGGCATGTATAAATTTACTCGTCAAGATATTGAATCAATTGTAAGCCG
AGATATAAGAATTGTTAGCATCGATAGCAATTCTTTGAGTTTTGACGACA
CAAGTTCAGGGTTTGAACATTGGATTCCCATTCTAAACAAATTGAAGTAT
TTAGAAGAATTCATTTTGAATCATCCTGTTTCCTTTCAAGAAGAACTACC
TCCAATCTCTTTACTGAAACACTTACCGATTCGAAAGATGAATACAAGTC
ATTTTAATTTCCATAAGGAAAGCATTCAAAATGTTGTTAAAACAATGCTG
AAAATGAGACATCTGGAATCGGTTATTATTGATGAAGCCTCCAATTGGCA
CTGGGAATATAAGTTTTCACCTGACGAGATTCTCTTATTCAAATCTTTAC
CAGTAAAATCGGTTAGTTTATACGCATTGAATCTAACCAAAGAAAATGTT
GAAATATTTCGTCGGATCATCTGTGAAATCATGGAAATTGAAACGATCAA
AGGATTTGATCAATTTGGTCGTTGTGAAGAGACTAAAGAACTTGGCATTT
CCAAAATCATGTCACGTGGACCTTTTGGAATCTTCAAAAGTATTTAACCA
AGATAACTTTCATTTCTAAAGTTCAAGTGAACTGCCTAGACATCCAAAGT
AGTTGTGACTTGAATGACTTTCTTGATGACATATCAATGAACAAGAAAAC
AGAGCTTCACTTGCCGGCAATGAAGTATGGCATGTATAAATTTACTCGTC
AAGATATTGAATCAATTGTAAGCCGAGATATAAGAATTGTTAGCATCGAT
AGCAATTCTTTGAGTTTTGACGACACAAGTTCAGGGTTTGAACATTGGAT
TCCCATTCTAAACAAATTGAAGTATTTAGAAGAATTCATTTTGAATCATC
CTGTTTCCTTTCAAGAAGAACTACCTCCAATCTCTTTACTGAAACACTTA
CCGATTCGAAAGATGAATACAAGTCATTTTAATTTCCATAAGGAAAGCAT
TCAAAATGTTGTTAAAACAATGCTGAAAATGAGACATCTGGAATCGGTTA
TTATTGATGAAGCCTCCAATTGGCACTGGGAATATAAGTTTTCACCTGAC
GAGATTCTCTTATTCAAATCTTTACCAGTAAAATCGGTTAGTTTATACGC
ATTGAATCTAACCAAAGAAAATGTTGAAATATTTCGTCGGATCATCTGTG
AAATCATGGAAATTGAAACGATCAAAGGATTTGATCAATTTGGTCGTTGT
GAAGAGACTAAAGAACTTGGCATTTCCAAAATCATGTCACGTGGACCTTT
TGGAATCTTCAAAAGTATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:782108..788465 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 514-1236:724 |
| Aaloc | 1-510:6359 |
|
