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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:723836..729357- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037487 ID=XLOC_037487|Name=XLOC_037487|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5522bp|location=Sequence derived from alignment at sc0000080_pilon:723836..729357- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTTTGGTATTATTTTGACGGCAACATTGGTGGCTGCAGTATTAGG
TTTGTAAAATTATTCTAAGAATTTTGGTATATGATTTTTTGATCCTCAAA
GTTTACGAGAACTGACAAATGCGGAGCGTTCATTTTGACTATTTTTCTAA
CGAGCCTCTTCATAGCATCCTCCACAATGGTTAAAGGAGGCTTTGCCTAA
AAATGGTAGCTGAAAGTGTGAAATTTTTTTGAAAGCCTAGTATTCAGGTA
CGTCCATTTCAGCATTTTATTCCTAAGTTTGCGATAAACACACTTTTAAT
GTGTTTGTTGAACAACCATTAAAAGAGTGCTCAATACTCTTTCGTAGAGC
AAATTCATAAAGTTATATTTCAAAAAAAAAATTTTAATTAAAAAAAAATT
ATTTTTACATGGTGATTTTTGAAATATAACTTTATGATAAACACACTATA
ATATTTTTCGGTTTTCAGGCAGTGTTCCATTGACGCCACCCGAGAAATGT
ACACGCACGTGGAAAAAGATTGGTTGTTTTCACGATCGAATCATTCCCAA
CAGACCTTTACCGTACGAAGTAGCAAACCATCGAGATCCAATAAACAAAA
ACTGGGATGGACATCTCATTAATTGGCAAAAATGGCCTGAATCACTCCAT
GCGTAAGACCCCCCTTTAGTTTCAACTTGATAACGAAAGAAAGAAAGTCA
TGATTACGTCATATTTATGATTTTCATGATGTAATTTTTTATGCGGAAGC
ATCCAAAATACTCCGGGCGTTTGCCTCTAGTTTTATTATTTAACCCTTTA
AGTGCCGATGTCGTATATATCGGACATGGGCTATGAAGGAGGACAAAGCC
CTCCTGTAATGCCCAGTTTGAGTTAGAAATCGTCATTTTTGGTCTAACTC
GTAGGAATTGGATTTGGTCAAGCAAAAACAAAATCAAAAGTGAGTCTTTT
CGGCGAGATTTTCAGCTAAAAAGTCAAAAAAATGCAAAAATTTGACAAAA
ATCCACTTTTTAAAGATTTTGACCATATTTGGTCAACGAGTGATCCAAGA
ACCTCCAAATTTTCCCCCGATTTACTTAATTCTGTCCTCCAGCGAATTAA
TCTAAAGTTTTACCACTGGGCACCTTTATATCATTCAGGCAGGTCCGCGC
AGCGGCCAGAAAGAGAAGACTCTAAGCTATCCATCCAACGGACTATAAAC
AAGCTTCTAATTCCTTCTAGTTCCGGAGATATAAGCCTTTAAAGTTTGAA
CTAGCGATTGTCTTTAAAAAAATTAAAGGGTTAAATAAGCAATGGGTCTT
TTTGGCTACTTCGGTATATATTATTCTGCCATGAATTATCCTTTGAAACT
ACTAGTTTAATCGTTAATCTTTCACAGTTCTGGTTGGAATTAGGAATTCA
ACAGAACTTTATGTACCTAGTAGGAGAATGTTTTCTCAACATCTTCGTAC
TTCTCTATTAAAAAGATTGGCTTGCAAATGTGCTGCTTTAACCAAAGGCC
GAGGACACCGATATTTTGGTCTTCAATTTTATGGAGAATGTTGGACCGGA
CCTTCCCTCCAATACGATCGTGACGGGCCATCTAAATCATGTATTGGTAT
CGATTACAAAGCGTGCGAAGATAAATCACAAACTGAATGCGTCGGAAAAG
CTTTCACAAATTACATCTATGACACACATACTGATGGTAAGTTGGGTGGT
TATTTTACCGAACACCGGAATTCTCTTTAATTTGATCGATTGTTCCTCGG
TTTGTGGAAGGATTATCAAGTTAAAATAGGAAAAGTCTAACGCATGGTGT
TGTCTAGACATTTTTAACCATTCACCAGATTGCTGAATTTTTGGTTAATG
ACGGGTTATTCTCTGATTATACTTCTTGTAATTATTTAAAACTCTGATTG
GCTGAGACGGGTAAATTCAGAAGTCAGGGCATTTAAGAAATTATATGTTA
ATAAATAATGTACTCTTCTTTAGCCAGTCAGAACTTTAGCGCACAGCTAT
ACGCAAAACACAAAGAGGAATGAATACGTAAAGGTGGTACAGTCACTTTC
GGTCGGGGTTGTGGATGGTGAAATTTGTCGTTATTTTTTAAATGTTGTGA
AGTAGGCACTTTCTCGCCCTCATAGAACAAAATCTGATATTTCTTCTCTC
TTCTAGTCGAAACGCCAACAGACGGTGGTTGGTCAACATGGCAATCGTGG
TCTTCATGCACCAAGAGTTGTGGTGGAGGTGCACGTGAGCGTACTCGATC
ATGTACCAACCCTCGTCCGTCCAATGGTGGTCAATCGTGTACTGGTGAAA
AAGTTGAAGAATCATCCTGTAATACTGACACTTGTGTGCCAGGTGAGTGA
CTTTTATTATTTTAAATTGTTCGTGCAGTGTTAGAAAAAACGAAAAATGA
CTACTCTGGAATTGACAGTGATGCTTTACAATGACCAAAGCTCTTGTCAG
AAACATTTCTTTTCAAAGAGTGCTAAATGATATTTCCATCCAAAAATCAT
CGAAAAGAAATAAAGATTCACATATACTATCGGGGGTCCTAAAGGTTTGC
TCTCTACTATAATGGATAGTATCTTTTATGCATAGCCTGATTCAGCAAAT
TCAAATTCAGTGTGTCCCAAAAGTGTGTTACATATCAATTGTTTCATTGA
AATATGTTATTTCATTTAGTATGCAACAAGAATATTGATATTGCTGTTAT
CACCGATGCTTCGACCAGTGTTACATCCAAAAATTATCTCAAAGTCAAAG
AATTCGTTGTCAAGCTCACTGAGGAGTTTCACGTCGGAAAAGATCAAACA
CATTTCGCTATGATTCATTTCGCGTGGCGTGCTTATTTGGATTTCAACTT
TGCTGACAAGGAATTCTGGGATGTTTACAATTTGAGGAATAAGATCATGA
GCAGTAAATACACATATGGTAAGCAAGATGTCTTCTTTTAGGTTATCAGT
AAGGAGTTGAACCGTAGGGAGTCACGACCATTGCGTTTGATTCCTCTATA
GAGAAATCTTTAACCTTTCCCAAGAATGAAAAAGCCCTAACATTGAATCT
AGCCTTTTTCTTTGTTTTCGCGTGACATTTTAATATTCAAAATCTGGCGA
TTTTACTTTCAATCTAGCGTTTGTGTGAAAACCACTTGGGCTACGCGTTT
TGGATGGGTAATAAGTGGCTTCATTTCCCAACCAGGAGTTTTGGTTTCTA
ACCCAATCGGGACTTTGAAGTCAATGGTCATGACATCACTCATTTGACTA
AACCGTATGCGGTTAGTTCGAAAGTAAAGGTGATGCTTGGGGTTACCAGT
GTTGTAGTAGCCATCAAAAAAAGTAATTCTTGTATCGTCTATTTAGGTTG
ATAAATCGATGTCCACTTTAAAGTTCTCGGATGTTATAAGAGGTTACCGG
TTTTAGATTTAGTCATTCTTGTCGAAATCTATGGGTTTAAATCTCTATCT
TAGAAACGCGAAAACCGATTCCTGGAAATAGAAATTCTTTCTGAAGCCAA
GCTTTATAGGTTGTTTAACATTCCTTTACATAGAGATAACTACTTGTGAG
GTGATCTTTGCTGACTCCAAATATCAATTTTCCTTTTTGCAGGTGGTACC
AGAACTGATTTAGCATTAAAGATGGCCGAAGAAAAAGTATTTTGTGATTC
ATGTGGAACACGTGGCCCTAACGTACCAAAAGTGTTGATTGTGATTACAG
ATGGCAAAAGCAGCTATTCATCACAAACCATGACTGAGGCTAGCAAAGGA
TTAAAGGTATAATGGTTCATCGTTTCATTTAAAGAGTATTTAAAAGGGCT
GATTTGATTTAGCCTGTAATATGAAATAGTGGTTTTTTAGTGCTTAAAAG
TATGGTTGGAAAGAAGAGTTTTAACTCTAGCTTAAGCTTTAAATCCTGAT
AAACGTTACAATACCCAAAATTGTCAATATATTTCGACTGTGATTATAGT
TATTTGTAAATTCATTCATTCATTCATTCACTCATTCCTACAGGGCAAGA
AAGTGACCATTATTTCAATGGGAATTGGTCGAGCAATCGATAATGACGAA
TTAGTTGAGATTGCCACTGATAGAGAACATGTCTTTGTGGCTGATGATTT
CAAATACATGATTGATAAATTGAACAGTATCACAAGATTGTCTTGTCAAG
CTCGTAAGTAAAACCTTTATCTGGTACTCGATGTAGAAATTTTCTTCCGA
CACGCTAAAGCTCTGAAGGTCGGGAAAATTTTAACATCTGGAACCTTTGG
GTTACCATTTTTCATTTTTCTGTAAGGTTTCTCAGGCAGCAGAGATTTTC
ATGCTAAATTCAGTCGGGTGCAACCGATAGTCAAGCAAAAAGTGTAAGGA
CAGCTAGACAATACTGTGATGCGGTACATCAAACGATGATTACTATAGGT
CTCCGATGGTGATATTGGCCCGCTCCTTCAGAGCTTTAGCGTTGGCGGCC
GCCAATACACCATCGGAATATCAGATAAGTGAAACCTTTAAAATGTTATA
TCATTGGCGATCCAAAAAGTATCAGCAATCTGATTGGTTAAAAAAGAGTA
CAATATATCTTGTATTTTACATGTACAAAAATAAATTGACGTAAAGATGT
TGTTGCATTGTAGCGGTTAAAAGCAATCTAACGTCACTTTGCTACCAAGG
TGCTCTGCGTTTTTTCCAACACAAAAAGTTCATTTTTTAGGTCACCGATA
AACCAGTTATCAGACATTTGCTCGTACAATATGGAAATATTTTACTCGTT
CCGGATTTTTCGTATATTAAAATATTGTACGGAAAAATCTCAGAACTTGT
AAAATTATTTCTCATATTGTACTCGCAATTGTCCGATAACTATTATTACA
TATTGTTGAATAGAAATTTGGAAAGATTGTATTCACGGGAATCGGGAAAT
TTTCGTGTTTGGTTAAATTTAACCAATATACGAAGTCCCAGACTTCAGGC
TATAACTCTTGACAACTTTATTTAAAGCGGCATATACAGAATGCTTCGAG
AACCCGGGGGGGGGGGGGCAGCCAAGCAAAATGACTGAGTTTTTTTAAGG
GATGCAATCCCCTTTCCATAATACTTTTCAAATATTGGATCAAGTACGTA
TTGGATCCCTTTTTAGATGCAAAATTACATAAATATATACTGTATAGAAG
AATCACACCCAGCGTGTCTATTTCAATCACTTCAGGGAAAAAAGCTAGAC
TGCACTGTAAGGGTGTATTTTTCAGGAAAAACCACTGCACTGCAAGGGTG
CGATTTTAAACACCAATTTTTAGCCCGCGCATACCGTCAGTCCAAAATCC
GACTGCCCCCCCCCCCCCGGGTTCGAGAAAGAGTATAAAAATACAAATAC
GAAAATTTTCAAAAAATATTCCGCGCTGGAAAGGAAAGTAAGTCTCCTTT
CTCCCGTTAATGATACCCGATATTGCCAATATTCCAGGAAAAAAATAATT
ACAAATTTCAATCATGTATCCTTTTTCTTGTTTACAGAATACGATATCGA
TTCTTTCCGAATGATCGAATAA Coding sequence (CDS) from alignment at sc0000080_pilon:723836..729357- >XLOC_037487 ID=XLOC_037487|Name=XLOC_037487|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2496bp|location=Sequence derived from alignment at sc0000080_pilon:723836..729357- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTTTGGTATTATTTTGACGGCAACATTGGTGGCTGCAGTATTAGA
TGAATTTTGGTATTATTTTGACGGCAACATTGGTGGCTGCAGTATTAGGC
AGTGTTCCATTGACGCCACCCGAGAAATGTACACGCACGTGGAAAAAGAT
TGGTTGTTTTCACGATCGAATCATTCCCAACAGACCTTTACCGTACGAAG
TAGCAAACCATCGAGATCCAATAAACAAAAACTGGGATGGACATCTCATT
AATTGGCAAAAATGGCCTGAATCACTCCATGCGCAGTGTTCCATTGACGC
CACCCGAGAAATGTACACGCACGTGGAAAAAGATTGGTTGTTTTCACGAT
CGAATCATTCCCAACAGACCTTTACCGTACGAAGTAGCAAACCATCGAGA
TCCAATAAACAAAAACTGGGATGGACATCTCATTAATTGGCAAAAATGGC
CTGAATCACTCCATGCATTGGCTTGCAAATGTGCTGCTTTAACCAAAGGC
CGAGGACACCGATATTTTGGTCTTCAATTTTATGGAGAATGTTGGACCGG
ACCTTCCCTCCAATACGATCGTGACGGGCCATCTAAATCATGTATTGGTA
TCGATTACAAAGCGTGCGAAGATAAATCACAAACTGAATGCGTCGGAAAA
GCTTTCACAAATTACATCTATGACACACATACTGATGATTGGCTTGCAAA
TGTGCTGCTTTAACCAAAGGCCGAGGACACCGATATTTTGGTCTTCAATT
TTATGGAGAATGTTGGACCGGACCTTCCCTCCAATACGATCGTGACGGGC
CATCTAAATCATGTATTGGTATCGATTACAAAGCGTGCGAAGATAAATCA
CAAACTGAATGCGTCGGAAAAGCTTTCACAAATTACATCTATGACACACA
TACTGATGTCGAAACGCCAACAGACGGTGGTTGGTCAACATGGCAATCGT
GGTCTTCATGCACCAAGAGTTGTGGTGGAGGTGCACGTGAGCGTACTCGA
TCATGTACCAACCCTCGTCCGTCCAATGGTGGTCAATCGTGTACTGGTGA
AAAAGTTGAAGAATCATCCTGTAATACTGACACTTGTGTGCCAGTCGAAA
CGCCAACAGACGGTGGTTGGTCAACATGGCAATCGTGGTCTTCATGCACC
AAGAGTTGTGGTGGAGGTGCACGTGAGCGTACTCGATCATGTACCAACCC
TCGTCCGTCCAATGGTGGTCAATCGTGTACTGGTGAAAAAGTTGAAGAAT
CATCCTGTAATACTGACACTTGTGTGCCAGTATGCAACAAGAATATTGAT
ATTGCTGTTATCACCGATGCTTCGACCAGTGTTACATCCAAAAATTATCT
CAAAGTCAAAGAATTCGTTGTCAAGCTCACTGAGGAGTTTCACGTCGGAA
AAGATCAAACACATTTCGCTATGATTCATTTCGCGTGGCGTGCTTATTTG
GATTTCAACTTTGCTGACAAGGAATTCTGGGATGTTTACAATTTGAGGAA
TAAGATCATGAGCAGTAAATACACATATGTATGCAACAAGAATATTGATA
TTGCTGTTATCACCGATGCTTCGACCAGTGTTACATCCAAAAATTATCTC
AAAGTCAAAGAATTCGTTGTCAAGCTCACTGAGGAGTTTCACGTCGGAAA
AGATCAAACACATTTCGCTATGATTCATTTCGCGTGGCGTGCTTATTTGG
ATTTCAACTTTGCTGACAAGGAATTCTGGGATGTTTACAATTTGAGGAAT
AAGATCATGAGCAGTAAATACACATATGGTGGTACCAGAACTGATTTAGC
ATTAAAGATGGCCGAAGAAAAAGTATTTTGTGATTCATGTGGAACACGTG
GCCCTAACGTACCAAAAGTGTTGATTGTGATTACAGATGGCAAAAGCAGC
TATTCATCACAAACCATGACTGAGGCTAGCAAAGGATTAAAGGTGGTACC
AGAACTGATTTAGCATTAAAGATGGCCGAAGAAAAAGTATTTTGTGATTC
ATGTGGAACACGTGGCCCTAACGTACCAAAAGTGTTGATTGTGATTACAG
ATGGCAAAAGCAGCTATTCATCACAAACCATGACTGAGGCTAGCAAAGGA
TTAAAGGGCAAGAAAGTGACCATTATTTCAATGGGAATTGGTCGAGCAAT
CGATAATGACGAATTAGTTGAGATTGCCACTGATAGAGAACATGTCTTTG
TGGCTGATGATTTCAAATACATGATTGATAAATTGAACAGTATCACAAGA
TTGTCTTGTCAAGCTCGGCAAGAAAGTGACCATTATTTCAATGGGAATTG
GTCGAGCAATCGATAATGACGAATTAGTTGAGATTGCCACTGATAGAGAA
CATGTCTTTGTGGCTGATGATTTCAAATACATGATTGATAAATTGAACAG
TATCACAAGATTGTCTTGTCAAGCTCAATACGATATCGATTCTTTCCGAA
TGATCGAATAAAATACGATATCGATTCTTTCCGAATGATCGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:723836..729357 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1216-1248:34 |
| Aaloc | 1054-1212:1530 |
| Aaloc | 892-1053:1929 |
| Aaloc | 643-888:2852 |
| Aaloc | 457-639:3365 |
| Aaloc | 235-453:4057 |
| Aaloc | 52-231:5053 |
| Aaloc | 1-48:5523 |
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