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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:605026..609039- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037485 ID=XLOC_037485|Name=XLOC_037485|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4014bp|location=Sequence derived from alignment at sc0000080_pilon:605026..609039- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACTTTTCAACATTTCTAACACTTTTACTTTTCTTACACATTTATTC
AAGCTCAGCATACTTCACTCAGCAAGGTAAAACTTTTACTTATATACAGT
GAAGTCACCCTAGTAACTAAATAATGAAGCCTATAAATCTTCTTAACTTT
TTGAAATTTAAACCTAAAAATGTTCTTGTTCTTATTTTCACCATTTTGTG
AGCATTTTTGTCCGTTTTCTTAAGAACTTTGCCATTTTATAGTCTGCAAA
GCCATAAAACGTTCTTGACATTTTGGCCATATCGAAGCCTTATGTTCCTA
TATAGTTTGTTCTTATAAAAAACGTGCATCTCTAGTTCAGACCACTGTTA
TTTGATTCTACCTCTAATTCGGTCCCCTCAACTGAAAAGTGAGAGAATTT
CCTTGTTATTCAAATTTTTCTCTAATTCGAAGATTTTGTGTCCTTTGGAG
ATGGAATCAAGCAAAAGTTTGCTGACAGCGGGGAGGCTGGGGTGGCTGAA
GCCAGAAAAATAAAACTTTTTTCTACGATTCCTGACAAATTCTATCTCAT
TTTGAGCCTTCAGCTCCTCCACTGGGGGTGGGGTTCATGGTTGGAGGGGT
TTATGGTTGGCGGAGGAGCGGAATCGGCATTTAGCAAAAGGTTTTGCGGA
ATTTCGGAGTTGGCCAAAAATATTTAAAATCCGCGGAATTTTTGACAAAA
ACATTGAATTTCAAAGGAATTTTCGGGCGGAATTTCGATTCATCTTTAGA
GGGTTTGACAGAAATTGGAGAAAAAAATTGGCGGAAATGCGGAATTGGGT
ACCCCCTTAAACCCCCTCCACTGTTACTGTTGTTCCACCTGGCCTGACTG
ATACCCTTGTGGTGTTGATTCTAAATTACGTAATTCCATTTAATAATTTT
TTAGATGGTAATTTGACCTGCAATGCAACCAGTATGTCGATTGAATTTGA
TGTCGTTAAACTGATTTCTCGAGGACGTCCGTTCAAAATTCATTTTCAAA
ATGCCAATCTCACCGAGGCTAAAAATTCCTCTGGATCTTCATGCATGCTT
CAGTATAATGGTACAGAAGATATGACAAACAAAACACTCATTTTAGAAGC
TAATTTTAACGAATGTGGAATAGACATTTATCAACAAAACGGCTTTATCG
TATACAATCAAACTGTTTTAGTGTCTTTTGGTGAGAACCCGAAATCTAGC
CCGGTCTACCGTCTAGAAGAAGTAGCTTTTAAAGTTGGATGTAAGAAATC
GAATAATTTGACGGTCAATCTTGATGGATACTTCAATGTGACAAGTACTT
TGAAGAGAGAAGTAATTTCCGTTGGTAAGAGAATTTTTATTGATTTCAAT
TTTATTATTTTCAACCTTTTCATAAATTCCGTCACGAATATTACTTACCT
CGTAATCATACAATTACCATGGTGATCATATCCCTTGACACATTAAATGA
TCTTTTTATGAATAGAAAGTAGTTTTAATAAAATCTGTTGGGAGTTGTTC
ACCTTGGCAATAATTTCAAAACGAGGCAACTGATGTTCGTGACGTAAATT
ATGAAAATCTATTTGTGAGCTATCTTTTTCATCCAACTTTGTTTAAATTT
CTAACAGCCCTGGCGGGAGTAACAGCCTCAATTGCCGTAGAATTTAAGCA
TCCCTTTAGATTTTTCATTTGCTGCAATTGCAGTTTACACATGGAACAGA
ATTTAAGATTCAACCATATGGAACAATAACAATAACAGTCAAAATTTTCC
TTAACAATTGGAACAGCGTTAAAATCGCAAAAAAACTGTATAGTACTGCA
GTGAAGCCACTTTATTGCAATTTTGGCGCTTTTGATTGTTAAGGGAACTA
TTGGATTGTTATAGGTAAGTCCAAAACATTGTCTGGCATTTGAAACTAAT
TTAGAATTCAATTTTATTTTGCTTTCTAGACGGCAATGCGAATTTCGATA
TCAGATTATTCCGTACACAAGATGATACATACACCAAAGAAGAATCCTCT
TCCTCTTTGACACTCGGTAACATGATTTATTTCAAGATTCAATTATCATC
AGTTCGAAACGATTTGAAAATCTCTCCACAATCGTGCTATGCTACAAACA
CACAGAATTCCGCTGAAAGATATTATTTGATTCAGAACAAGTAAGCATAC
ACGTTTTTTTTTTATAAGGAACACGTTTATAAGGAACTCGAGGCTGAAAA
TGGTTTAAAAAATAAGGAATTGTTAAGGAACTGCTCAGACTGAGAATAAG
TGGATTTGAAAATAATGTACCTTATTGGGACTAATTTGACCAAATTTTGA
TCTTTCAAGGGGCAAAAAGTTCAAAATTTCCTATGTAGTAAGGAACTCGA
TAAGGAACTTTGAGACTGAAATTCTCTGTAAAAATAAGGAACTCCAGGCT
CAGAGCAAAGTTAAGGTTCCTTATAAAAAAAAAACGTGTATATCATTATT
TTACTGTGAGACAGGGGGGCTATTTTAAATCAATTTTCAAACATAGAAAT
CTAAGCTAATAACTTTATATATGTATCGCTCTATTATTCGAAAATATATT
TCATACTAAACCATAGATGTAAAAGACTCAACTTTCACCTCCCAAGCGGT
ATGCAAATTGTCCTACCCTTTTTTATTTAGATGTGAAAATCCCAACGATT
CGACAGTCAAGATCTCTTCTCAAGCCTCACCAACCATCTTTCAATGGAAA
AATGAAGCTTTCCGATTTTTCAATGCATCCGATTCTGTTTATATAACTTG
CAATGTCTTTATCTGTGAATCTTCAACCATGGTTCAAGCCTGTGACCGTT
GTGAACAATGGAGTGGGAGAAAGAGACGTGGTTTAGATTTGACTGAGCTT
GGAAACAATGAAAAAATAGAAACAGCTACTATAAAATCACCCATCTATAT
ATTATTAGGTAAGTCTTAAACTGTTAAAGGTTTTTTTTTCTTATATCAGA
GCGTTCCCGTTTCATATCAGACACGTGTTTCATATATCACGATGATGTCT
CCTTATTATCATGTTGTGATTTCCTCTTTCTTGCGCTCCACATTTTTTTT
TTTTTCTTATTTCTTTTTTATTTTTATTTTTTTTATTTCATTTTATTTAT
TTTTTTTTTTTTGAAAAACACATACTGTACATCAGATGATTTGAAGTTGT
TCAAAATAGCTTGGAAAGTACTCATGTTGCTGAAAATAATTTACTTCAAA
ATTTAACTATGACAAGAATTCTAAATGAGGCCCCAACAGCAGACCTTCAA
TTCACGCAATTATGCAATTTTTTCCCCAAATTCACGCATTCACGCAATGT
TTTTCTCGCAATTCACACAATTTTTGTTCACGCAAAACTTTCCTATTCAC
GCATTCCCGAAATTGTTTTTAAATTTTCACGCATCATTCATGCAAGTGAA
AAAGCGCATTCTCGCAGTCCGGTGGGGGCCCCCTAAATAAATGATTGCAA
CATTTATGCTTACATTTTAAATCTTTAAAAAAGTGATACTCGTAAAAAAT
ATGTTCACTGAAATCGGGTGGTGCTATTCCAGAATTTAAAGTAAACCTTA
TCAGTCAAGAATAAAGACTAAATTTATTTCGTCTTGAAGACTGCCGTTTC
AGGCAGTCTTCAGTCAGATTTTGAAATCGGATTATTATAAAATCTATTAT
AAAATCTGACTGACTGCATGAAACGGCGCGAAACTCAGAGTATCGAAAAA
TAAATTTGTCTCTATTCTTGACTGATAAATCGCTCTACCGATGGTATAGA
GCACTTAAATCATAAGTCATATTTGCAAATAAAGTAAACCTTATATATTC
TCCGTTTCAAATTTCAGATCCTGTTAAACTTGATGACTACAGAACAAAAT
TTACACCACTTCAATCCAAAGATGAAACAAATTTATTTGCTGGTGTTAAA
GGATCCATTATTCTTGTACTTTCAATGCTTTTGGTCATCATCATGGCAAC
TTTACTGGTTAAAAAGATTCTTGAAAAACGAAATTGTTTCGGTGTTAGTG
AAGAATCGACTTGA Coding sequence (CDS) from alignment at sc0000080_pilon:605026..609039- >XLOC_037485 ID=XLOC_037485|Name=XLOC_037485|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2364bp|location=Sequence derived from alignment at sc0000080_pilon:605026..609039- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACTTTTCAACATTTCTAACACTTTTACTTTTCTTACACATTTATTC
AAGCTCAGCATACTTCACTCAGCAAGATGGACTTTTCAACATTTCTAACA
CTTTTACTTTTCTTACACATTTATTCAAGCTCAGCATACTTCACTCAGCA
AGATGGTAATTTGACCTGCAATGCAACCAGTATGTCGATTGAATTTGATG
TCGTTAAACTGATTTCTCGAGGACGTCCGTTCAAAATTCATTTTCAAAAT
GCCAATCTCACCGAGGCTAAAAATTCCTCTGGATCTTCATGCATGCTTCA
GTATAATGGTACAGAAGATATGACAAACAAAACACTCATTTTAGAAGCTA
ATTTTAACGAATGTGGAATAGACATTTATCAACAAAACGGCTTTATCGTA
TACAATCAAACTGTTTTAGTGTCTTTTGGTGAGAACCCGAAATCTAGCCC
GGTCTACCGTCTAGAAGAAGTAGCTTTTAAAGTTGGATGTAAGAAATCGA
ATAATTTGACGGTCAATCTTGATGGATACTTCAATGTGACAAGTACTTTG
AAGAGAGAAGTAATTTCCGTTGATGGTAATTTGACCTGCAATGCAACCAG
TATGTCGATTGAATTTGATGTCGTTAAACTGATTTCTCGAGGACGTCCGT
TCAAAATTCATTTTCAAAATGCCAATCTCACCGAGGCTAAAAATTCCTCT
GGATCTTCATGCATGCTTCAGTATAATGGTACAGAAGATATGACAAACAA
AACACTCATTTTAGAAGCTAATTTTAACGAATGTGGAATAGACATTTATC
AACAAAACGGCTTTATCGTATACAATCAAACTGTTTTAGTGTCTTTTGGT
GAGAACCCGAAATCTAGCCCGGTCTACCGTCTAGAAGAAGTAGCTTTTAA
AGTTGGATGTAAGAAATCGAATAATTTGACGGTCAATCTTGATGGATACT
TCAATGTGACAAGTACTTTGAAGAGAGAAGTAATTTCCGTTGACGGCAAT
GCGAATTTCGATATCAGATTATTCCGTACACAAGATGATACATACACCAA
AGAAGAATCCTCTTCCTCTTTGACACTCGGTAACATGATTTATTTCAAGA
TTCAATTATCATCAGTTCGAAACGATTTGAAAATCTCTCCACAATCGTGC
TATGCTACAAACACACAGAATTCCGCTGAAAGATATTATTTGATTCAGAA
CAAACGGCAATGCGAATTTCGATATCAGATTATTCCGTACACAAGATGAT
ACATACACCAAAGAAGAATCCTCTTCCTCTTTGACACTCGGTAACATGAT
TTATTTCAAGATTCAATTATCATCAGTTCGAAACGATTTGAAAATCTCTC
CACAATCGTGCTATGCTACAAACACACAGAATTCCGCTGAAAGATATTAT
TTGATTCAGAACAAATGTGAAAATCCCAACGATTCGACAGTCAAGATCTC
TTCTCAAGCCTCACCAACCATCTTTCAATGGAAAAATGAAGCTTTCCGAT
TTTTCAATGCATCCGATTCTGTTTATATAACTTGCAATGTCTTTATCTGT
GAATCTTCAACCATGGTTCAAGCCTGTGACCGTTGTGAACAATGGAGTGG
GAGAAAGAGACGTGGTTTAGATTTGACTGAGCTTGGAAACAATGAAAAAA
TAGAAACAGCTACTATAAAATCACCCATCTATATATTATTAGATGTGAAA
ATCCCAACGATTCGACAGTCAAGATCTCTTCTCAAGCCTCACCAACCATC
TTTCAATGGAAAAATGAAGCTTTCCGATTTTTCAATGCATCCGATTCTGT
TTATATAACTTGCAATGTCTTTATCTGTGAATCTTCAACCATGGTTCAAG
CCTGTGACCGTTGTGAACAATGGAGTGGGAGAAAGAGACGTGGTTTAGAT
TTGACTGAGCTTGGAAACAATGAAAAAATAGAAACAGCTACTATAAAATC
ACCCATCTATATATTATTAGATCCTGTTAAACTTGATGACTACAGAACAA
AATTTACACCACTTCAATCCAAAGATGAAACAAATTTATTTGCTGGTGTT
AAAGGATCCATTATTCTTGTACTTTCAATGCTTTTGGTCATCATCATGGC
AACTTTACTGGTTAAAAAGATTCTTGAAAAACGAAATTGTTTCGGTGTTA
GTGAAGAATCGACTTGAATCCTGTTAAACTTGATGACTACAGAACAAAAT
TTACACCACTTCAATCCAAAGATGAAACAAATTTATTTGCTGGTGTTAAA
GGATCCATTATTCTTGTACTTTCAATGCTTTTGGTCATCATCATGGCAAC
TTTACTGGTTAAAAAGATTCTTGAAAAACGAAATTGTTTCGGTGTTAGTG
AAGAATCGACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:605026..609039 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 988-1182:196 |
| Aaloc | 709-984:1384 |
| Aaloc | 499-705:2084 |
| Aaloc | 79-495:3109 |
| Aaloc | 1-75:4015 |
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