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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:321193..324152+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037457 ID=XLOC_037457|Name=XLOC_037457|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2960bp|location=Sequence derived from alignment at sc0000080_pilon:321193..324152+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAATGGAAGGAGGAGCAATGAAGATCAGAATGTCAGCAAAAATAC
ATTTGGCATGTCACTTGTGTACCTACAagctcaaaacaaacaaacagaca
aacaaacaaatatacaacatgaaaaggtatttttattTCCTATCCTTGAA
ACAATACTGAATAccattcttttattttgtcttttaaaaatttataagaa
cactcaAAAGGCTCGAtttgttttgcaaaaaaataatctaCGAACAGATT
AAGGACGctctgaaatatttttaggaaaaattacgcCTTTCATATTAGGA
AAACGGCTCAGCATGGGTCCTTATAAAAGGTGTACAGAATTTAAGATctt
ttttccttagttttctttctttgttttatcaatgGGAAAGTAGATTATTG
ATTTCTCATGACCTAACTGTCGCAGCCAGCCCCTCCCCTTTCACTAAGGG
GTTGTGCAGGTAGCGGGGGCTGGCCGTTATTGTGACGCTCTAATATTAAT
GAATATTTATATCATCGCAAATTAATTAGATAATCCATTCTACTGTACTA
GTGACGATTGGTTTGTTAAAAAGAAATCTAAAACGACGATTACTCATAGC
AACCAAAAACAAATATAGACTGCGTGTCGTgtgttcatttttctttcact
ttttaaaatccATAATTCTACTTTCCTCAAACAAATGTCTAGTAGAGTAC
ATTGTACGGAAATAGACTTTAAAAGATTCCGCATGGCAGGGTACCAGACT
GTGTCTCTCGCGATGTCTCTCGGATGCTCACAAGCTATTGTTACTCAGAG
TTTTTCCTTTGATTTTAGAGTAACGAAAAAGGAGAAACTTCGACATGATA
TTGTTAAAcaatacaaaaaaagaaaaagtcattaAGAAAGCCAAACGAGA
ATTGATCATCCTTCAATTAATTGCATTCATCaaaaaaaCTCGTTCCGAGA
TTCATTAACTTATCCTATTGTTTTAATTAAATGTAAAACAATAGCAATTA
ACAAGCGTCAGCTATAAAAGCCGATGGCTTTGCCATATCGTCTTcagttc
attttattttattttactcgAAAAAACGCTGGTCGTTTCACTTGAAAGAG
CGCTGGTCGCCTTTCCATCaaatatcaatcaaaaaaaatttaccaagCGC
TTATTAACCTTATTTGGCATAATTTTGTTGACATCAGCAAAAAATGGTAT
GTAtgtatttgatttttatatgttttttccTTTATGAAGGAACTTGTAGT
TTGACAGATTCGGATAAGAAAAGGGTTCAAATTTTATACGATAGAGAGTG
TTAGAATCATTAATAATTCCTTATTTGGAAATTCACACTCTCCATTCTAA
AGCTAGAATCTCCTTTTAGATTGCGTTGCATTTGCAGTCTATCATATTTT
GACAGACATAACGGTTGTTTTGGAGAATTTTCTAGCCTACCGCCCTCTTT
GCTTTccgtcaaaatatttttctaaaggttCTAGTGCCAAACACTTGACA
AGCGACGTGATTAGCTAACAATTGTTATTTTACTCCCTGAATTTTTCGCC
TTTTAAGTCAAAAATGTACATGTTATCTTTAGATTCAGGGGGTTAGCAGT
TACGCCACCCTTAGGGTTGAAAGCATTCCAAGGTCTCTTAAATGAAAATC
GGTATTAACGATTCGGTTTGGTTTTAAGTGCCTTATCAACAGTAACAAAT
ATTGTTCATTCTTTTCCAAAACCCAGACATACAAAACGATCTCAATGTTC
TATTTGACGCTCGTCGCAGTTGTGTTGGTCCAAGGACGTCCGCAAACTTT
GGAAACTCCATCCAATAAAGTCTCAGATGGTGGCGATACATTAATACAAC
AAGGACGAAATATGTTAGCTGAATTTCTGGTAAGTTCCTGACCTCATTTT
CTTTCCTCTCTTACGCTGACTTGAATGCAACGCCGTTTGATATCATTCTA
CAGTGAAGTGGTAACTTCAACAAGTTTTCTGCTCGCTTCAGTTAAAAATG
TCTTATAAGCATCACTccgtaactcgaaatttccttaactcgaacaaatt
tgtgttccccatgcgtgttcgagttatggagactccatttGTAACATGTT
AATATACATGGATGTACCAAGGATGTAACTGTGACGTTTATTTGCGCCAT
GCTTTGCAATCTGGTAAATACTAGCGTTCTTCTTAAGCGCACTTCTAAAG
TCCGCTAGAATACACGCCCCTAAATTTATCAGGACCTTCTAAAACAATGC
GTGACCTCGCTGGCGGCGAAAACCGAAAATGTTTATACATCAAACTTCGC
TACCTATAATATGCTAATTGAGAAAATGGGGTCGATTATTTAGTCATTTT
CATATCAGATTagcattttctttttcctctttacGCCCTTACAAAACTAG
AAACTAATTCAGTTATACGCGTTTTCaaagaaacataaaaattaacatGA
TTGGAAcactgtttttttcttcttaacggtgtgtaatattttctttttga
taggGGCAATTATATCACCTACGCACTTTCACTTAAAATATGTTTCTTAG
TCAGCCCTTTGTTCTTAAATGAGTTGTAACCGGTTACTAGGTTTAAAACA
CATAGACGTTTTCTTCCGGCAATCTTTCCTTACACAAGGGCTCTCGTGCA
TTTTTGAATGCACCTTCCATTTGCACAAAACAACCACCCACCCTCCCACT
ATCATTCAAACCACTTTGataattttaatgttttctaTACATTGACCAGT
TgaattcaatttcttttgttacCCTTTTAGCTCAAAGACGCTGCACTGGA
CACACACAAATTCAAACAAGACCATGGATGctataagaacatttataaaG
AGTGTACCCACGACTCTGCATGTGGATGCCACCTAAAATGCCTTGGAACC
ATGAAGAATAACAGGATTGTTAAACGTTGTATTTCTCCAACTTATCCACT
CATTCGATGA Coding sequence (CDS) from alignment at sc0000080_pilon:321193..324152+ >XLOC_037457 ID=XLOC_037457|Name=XLOC_037457|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=918bp|location=Sequence derived from alignment at sc0000080_pilon:321193..324152+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAATGGAAGGAGGAGCAATGAAGATCAGAATGTCAGCAAAAATAC
ATTTGGCATGTCACTTGTGTACCTACAagctcaaaacaaacaaacagaca
aacaaacaaatatacaacatgaaaagATGGGAAATGGAAGGAGGAGCAAT
GAAGATCAGAATGTCAGCAAAAATACATTTGGCATGTCACTTGTGTACCT
ACAagctcaaaacaaacaaacagacaaacaaacaaatatacaacatgaaa
agACATACAAAACGATCTCAATGTTCTATTTGACGCTCGTCGCAGTTGTG
TTGGTCCAAGGACGTCCGCAAACTTTGGAAACTCCATCCAATAAAGTCTC
AGATGGTGGCGATACATTAATACAACAAGGACGAAATATGTTAGCTGAAT
TTCTGACATACAAAACGATCTCAATGTTCTATTTGACGCTCGTCGCAGTT
GTGTTGGTCCAAGGACGTCCGCAAACTTTGGAAACTCCATCCAATAAAGT
CTCAGATGGTGGCGATACATTAATACAACAAGGACGAAATATGTTAGCTG
AATTTCTGCTCAAAGACGCTGCACTGGACACACACAAATTCAAACAAGAC
CATGGATGctataagaacatttataaaGAGTGTACCCACGACTCTGCATG
TGGATGCCACCTAAAATGCCTTGGAACCATGAAGAATAACAGGATTGTTA
AACGTTGTATTTCTCCAACTTATCCACTCATTCGATGACTCAAAGACGCT
GCACTGGACACACACAAATTCAAACAAGACCATGGATGctataagaacat
ttataaaGAGTGTACCCACGACTCTGCATGTGGATGCCACCTAAAATGCC
TTGGAACCATGAAGAATAACAGGATTGTTAAACGTTGTATTTCTCCAACT
TATCCACTCATTCGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:321193..324152 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 280-459:2781 |
| Aaloc | 127-279:1727 |
| Aaloc | 1-126:1 |
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