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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:290264..297220+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037456 ID=XLOC_037456|Name=XLOC_037456|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6957bp|location=Sequence derived from alignment at sc0000080_pilon:290264..297220+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAACATGATGAGgtataatatattgtattaTCAATTTCCATACCTta
ctacttttatttttatagttGATCCATTTTTCAATAATCTAATCCCCact
aaattgaaattattttctcacCTCAATGTTacttgtttcaaaaaaagtac
tcctttttttgtgttttccatATATCGTTGCTGAAAAAAGCCTTTTGCAT
GTATTCTGGTTACAAGTCTTGACTGCGCGGCTAAGGGTTAGTGTAAAttc
atttccaaaatttcatttcaggtGATTTGGCAACTAATCAACAATGgatt
ttgttctttcaaagtaaagtAAGTTGTTTAGTTTCCATagtatttttttt
gtgttgaacggtgaaaaagaatgcggctattatattttgatttttcccat
aGTATCTTCTTGTATGTATATCTTATAAATCCATTCAAACACTTTTTTCT
GTGTCATTGTCTTCATTTTATTGATCAACTTCAGGATAAATCATCCAAAC
TAGTATTATCTGCCTCACCGTACAACTCTTTTTGGGGTGTCAAACAATAG
CTGAATGGACAGGTAGAAATCACTATTCTGTGGCCAATCcagatttttta
taagataataTCTGTGTATTCTCATGTCTTTTATCAACAGAACCGAGACG
AAGACACTTTGTCAGAACGAGTATAATGTCTCTGGTCTATGTAACAGACA
ATCTTGTCCTCTAGCAAATAGCAGATATGCAACAATCAAAGAACATGATG
GTAAGGCTTTTTATTAAAGACATTTTGAGCATAACTCTGAATTTACAATT
AAAACGACAAAAccaaaaactgttttatcttTATCTCAAAGTATAGCTTG
AGGTGCATTGAGATAAACCTTGGCCACGTACATAGAATGTTTGCCTCAAG
TCTTTGCTTTGACTATATCTTATAAGACTGGATATCTTACTCAATTGGTT
GctatcattttgaattttacttCCATTTACTTCCACAAGTAAGGATAACG
TTGTTTATTTGCATCTCCAATCTGTTCCAATGCAGTaaatatcaatcaaa
ttttaagaaatgaGATTTTGTTACTTCTCAACTCttttttttAGGTGTAT
GTTACCTATACATGAAAACAATCGAACGAGCTCACACACCTGCCAAACTG
TGGGAAAAAATCAAGCTAAATCGAAATTATGAAAAAGCTATGGAACAAAT
CGATAAACATTTACTGTATTGGCCAAGTTATTCCATCcataaatgtaaac
aaaggTTCACAAGAATTACACAGGTAGCTTTTCCTTTCTGAaagattatt
ttttagaaagaagTAACCGGGATTCCAACAAATTACATGGTACTTGTTTT
CAATAAACATCCTCATCATGATGAGATATATTTATATATCAAATGGTTTA
AGAAAACTTTCTATACGCTTCAAATTCAAATGTGATCAGACAGAGGAATT
ATGAGTATGACATGAATTTCTGTATTGCTAATGTTTTGTTTGTGATTGTA
tttttttAGTACCTTATACGGATGCGTAAATTGCGTCTCAAAACACAGTA
AGTAATACATTATCAAAAACCTCAaaccttcaaaataaaataaagaaata
ttagatttctttttcatttttactagGCTGCTCGCATCCTCTCTGTTTTA
TATTAGGGAATgcatatcaattttgaaataattcggTCCAAATTTTATCC
ctgtactttttttcttttttcccaaTATTGATTCTGCATCATTATTGTCA
GGGTAAGAGTGCACCGATTGTGCATTTTTCCAATAGAGTAGGAAGCATGA
AGTTTTGTGTTAGTGCCGTGAAtattagaaacattttaagtATCTGACCA
TCTTGCGGAACAACTCGGTTGCTCCtttttttATGTTACTATACACAATT
GCCCTCTTTTTGTTCTAACTTTTTCTGGATTAGTATAAATGCAAGGATGG
AGTAACTTTGAGTAACTCTCTAACAGGAGTTCTATAAAATCTATTCAATA
CATTTCGGGGTTACATGCTGTAATCGAGCTTTTTATATCTTTAATAGAAA
GAAGCTAGTGACTGTCAGCAAAAAAGTAGAACGACGAGAAAAAACTCGAG
AGGTAAACATACAAAACTTTTACTTGTACTGTGACAAATAAGAGTAaaca
attcttttcttttttaagactTAAAAGCGCTGACACTTTTAATTGATATA
AAATTAATTTAGTTAGCACGATTTAGTGTGTACTTTGCCTCTTTCACATC
ATTTTGGGAACAATAGATTCATTCAGCATACGCTCAGATTACTGTATGTT
TACTGGTGTTTTTAACACCTATTATTAAATGAGATTTTACACTACCTTTT
CCACATTCCTCTATTTCAGGCGAAAGCTTTGAACGCAGCACAAATTGAGA
AGAATATCGAGAAAGAATTACTGGAAAGATTAAAGAAGGGAACGGTAAGA
CCATGCTTGACCCATAGCGTGAATAAGAATTATAATAACAATAGCTACAG
TTGACGCCCTCTGATTCGACGTTGTTCTATTCcattattcatagaattat
atttcacaggtctatcgacctctacgaaataattttagatttataaattg
tctaattcttcatctgtcgtccagtcgtcagaagatatggacagaagaga
agacgttgttttggtctttgtcctagattttcgaactaggcgaaggtttg
ttctagggcttcctcttacatgccaaacgaaatcgtcattttctgaattc
atttttttcgccttttggcacatatctttaatgatttttctttcgttgat
ggtgaagtcgtctgtgatgctaaagccaccaatttcattgaatcgtttca
gcttatgcagattttgcattatccgttctttttcctctatactttttaag
atcaacttgattggacgccaatgtagccctttttggttttgtccaatgcg
atgatggtgggacggtttgatatcttgaacgccaatgttacctagtatac
cttcaatatctattttgtcctgttcctgttgttcctctttgttgtctacc
tctaattccaccattccatgtataataatatttcgttttcttgattcgat
gtctctttcttcattcttgttttcttgttggtgttctctcactgctgatt
tgaaattatccttgtgtttcttagttatttcagcgtatgttttttctgat
gttttctctatgtaattcgtcgtttgctttatttcttcttttataatctg
cttggtttttatttcaaagtcagccatcttattggttaagatgttttcga
tatcgttcttaaggctgcggttcttggctagctggtttttgagcttttta
atgacgtcgtccttcttctcaatctccctctgcatcatatgatacgagtt
ctcacctattttactcattagagatcgtgttatccgcacgcaattctgac
atagatattgttcgttataagtgttggcaaaaatttgcagctgataaagc
ggtaattgtgtgcactcgtagtgtaccatgcggtggcattttcggcattt
tagacggttttggtcatcgtcatctgagcaggaggtgggagtgcatgttt
ggttttgtttagcttcttcaaatggttgtttttcttgctttttgtcggtt
ttttcgttcatgtttttgattttgctaaatttcaaccatttttgaagaac
tgctccatacgctccattattcgataatattgaaaggcACCGTCAACGAG
AAActttcataaacgacgctctattaTTATTCGATACTCTCccattcgat
gaaaattcaatcGCCTTCTCGAATAAGAAAGCACGTCAACTGTATTTAAG
AGAGCAATGTCAAAACACAAAGGTCTGTGCTCAATTCAAGCTAACTAATA
ACGAATGAGGTGTAATATACTATACTATGTTTGTATTGAAAAGCATTCGT
TTGGGCTTTTCCAGATAAAGTCCCTACCCGGTCCACCAACCCACCCCCGT
GTTTAGGAGGTCGGATCCCATAGGGGGTGTACCAAATCTCAAAATAAGGG
ACTGGAGTTCCAGGGGCTCTCGAAAAAATGAAGTTGTGGAATTCCAGGGG
CTATCGTTCCAATAATGTTGGAATTCCATAGGGGTACAGCAGAAAAATTC
GCCTCCTCAACAGAGAGATACCCCTCTCTTTCAAACTTTAactggaaaaa
gcccaatgttGTCTCTAAGTTTGTTATCAATACTGCagtgaaaaagaaga
ttatGTAATAATTTTGGAGTCATTGCGTGATATCTTCGCTAAATTTTTGA
ATCATCGTTGACTCATTAGAGATTGTAGTTCGTAGACACTcaatataata
tattttgaaatacgAGCGGAACAAAGCTGTTTACCAAGGACGTGCACATT
GGCACATAATTTTGTCTTCACATCGTTATTGTTTTGCTCGTTATTTCAAA
TCTTCGGGAAAGGTAGCAGCAGGGTTTTGAGATGAAACTGTTCATTTATT
ATGTCAGTATGGAGGATCTGAGAACCCACCTGGAGTTTATTAATTATGTT
AATTTACGTTATTTACATAATAAGAAATAGGGTTATTAAAAACAGTGCCC
TTCTTGGTCTCAtccattaaaatcaaaattctgaCATATATATATAGAAA
AGGTCTGGTGGAGATTTTGgttataaaataaatattgattaaGGTTTGTT
TTAGCATGTACAAAATTTGAGACCAATAAAGTTTTCCTTACACAAACTTT
TAGAAATTAACGCCCCTTAAAACTGGTACATTGTCAGAATTCCCctccgg
aaaaaatttttgctcCGTTATTTCAAGATTTGAACACCTTTAATCCGCCT
CTGGCACTTACTGGTATTGTGTGCCGAGAAACAACAtgccaaacaaacaa
actataCGTGCTGTTTTTACATACAAAACCATCAATTAATTGATCAATGA
CGAAAATTATCAATATCCCGTAAATCTTCTTTTCTACTCatgcaaatttt
aaaaatactttttagaTTTCGTAATGTGAAAACCATAAGTTGATATTGAA
CCGTGGCAGTATGTTAACTAATATACGCATGTCAAAATGTCTCTACTTTA
AAACCTTACCCCACGTCAGTGATAGAGTTATTTCCTCTCCTAAATTTTGC
GCAtgtttccctgagtttcccaAAGGTTTTAGGAAAAGACTTCCTTGCGT
AAAAATATGGATATTTGTTACGGTATTTTAAGgttcttttcaacttttaa
tttccgtgaaaattcaaattcattccGGGTGTCCTTTAATGATTATCTTT
GGACTAGGCCTATTCAGTAGGCTGAactgtttttagatttttgtgtTTAT
AACTTTCCAGAGATAAGTCTTATCCTGCTTCTTTCTTTAGTACGGAGATT
TTTACAATTTCCAGAGACGGCTCTTAATAAGgtgtttcttgtttttttct
ttagtaTGGAGATATCTACAACTTCCCAGAGACAGCTTTCGATAAGGTGT
TGGAGGACGAAGAGTTAGAATCGGATCACGGCGAAatggaagatgaagat
gaaattgAACAAGAGGTATAAATTATTCCTTTTTGTTtggtaatagacct
tttcataaattacgttacgaacatcacttgcctcgtttgaAAATACTGCC
atagtaatttatgaaaaggtctatttactTTTCTGTTTTatgaaacaaac
attttttacgAAGCTAATTTTTTCGTTTGACCTTCCTGTCTTTCCATTAT
CCTAGAGGTTTCAAAGCTCCAATTTTGCGAACTAAATCAATAGTTTCACA
TGCGTACGTGCTCATAAATCTATTTGAacgtctttattttctttttgatt
tagaTAGAAGAAGAATCAGAAGTAAGTGTGACTTTCCCGTCAATCTTATC
TTTGGTTGTAAACATTTCTATTGGATTATGCTTCCCAAATGACCCTGGTA
TTGACTAGGACTTTTACCGTGGATCTCCAATCACTTTATTGTAAAAGGAA
AATGATCCAGCAAAATTGATTTACCTTCAATTTTCAACCATTATTACTTA
TTACTGCTAAAGTCGATATGTCGATTCACTTGTTATTGTAGTCAAAAGGG
CAAATCTCGACATCCAGGTCTTTATATGGCTAACCAGGCTTCTAAAAATT
TTTGAGATTGACCCTTTAGCAGAGCCTGGCCTACACGAAAAAGATGCATA
AATCATTATTCAGATTTAAGGTTAGATAAATGTCTATTGATTTGAGATTG
GCCATTTTGCCCTTTTGTCAGCAAATGGGGCTTTACTTTAAAATTCATTT
GTTTTCGTTGATGGAtttttttAGGAAGAAGCACCAGAATTTATCGCTGA
TGAAGACTTTGATTATGATGAAAGTGATATGGAGGTAAAATGATATCCGc
aatcaatttttcattaacgttcaaatttatcatttttcaatatcattttt
tttcgCCGAGTCTATCATCTTCTTTTACTGCCAAaaatatctttcttctt
tttttctcttggCGAATATCTaaaaaaaCACTGAGATAGACTTAGTTGTC
CTTTGCTCATCTAGAAGGTACCTTAAAGGGGAAAACTTACAGTAGCCGGG
TAAAACTTTTCGTCTGGGAAAACTCCGTCCCTTTTGTGGAAATCTTTGTC
ACAATCTTCTTGTTGACCAGAAAAAGTTCGGAAAAACTTCGCCGCTATTC
CCCGAGCCCTTTTGAGACAAACAATACGAGATGGGAAGAAATAGAAGTCT
TAGATGGTCTTTCTACCTTTGTCACTTCTTCCGCAACAGGATTACGGTTC
GTTTTCATCGGagagtgaaagtgaagaagaaatcaaacaagaagaagaga
aagaagaaaaagcaacatcttccaaacaaaagaaaaaacgaaagaaaatc
gaaatcgaatatgagcgagaaaccgtacccaaatcaaaaGTCAAAGCAAC
ACGCTAA Coding sequence (CDS) from alignment at sc0000080_pilon:290264..297220+ >XLOC_037456 ID=XLOC_037456|Name=XLOC_037456|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1752bp|location=Sequence derived from alignment at sc0000080_pilon:290264..297220+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAACATGATGAGATGCAACATGATGAGgtGATTTGGCAACTAATCAA
CAATGgattttgttctttcaaagtaaagtGATTTGGCAACTAATCAACAA
TGgattttgttctttcaaagtaaaAACCGAGACGAAGACACTTTGTCAGA
ACGAGTATAATGTCTCTGGTCTATGTAACAGACAATCTTGTCCTCTAGCA
AATAGCAGATATGCAACAATCAAAGAACATGATGAACCGAGACGAAGACA
CTTTGTCAGAACGAGTATAATGTCTCTGGTCTATGTAACAGACAATCTTG
TCCTCTAGCAAATAGCAGATATGCAACAATCAAAGAACATGATGGTGTAT
GTTACCTATACATGAAAACAATCGAACGAGCTCACACACCTGCCAAACTG
TGGGAAAAAATCAAGCTAAATCGAAATTATGAAAAAGCTATGGAACAAAT
CGATAAACATTTACTGTATTGGCCAAGTTATTCCATCcataaatgtaaac
aaaggTTCACAAGAATTACACAGGTGTATGTTACCTATACATGAAAACAA
TCGAACGAGCTCACACACCTGCCAAACTGTGGGAAAAAATCAAGCTAAAT
CGAAATTATGAAAAAGCTATGGAACAAATCGATAAACATTTACTGTATTG
GCCAAGTTATTCCATCcataaatgtaaacaaaggTTCACAAGAATTACAC
AGTACCTTATACGGATGCGTAAATTGCGTCTCAAAACACATACCTTATAC
GGATGCGTAAATTGCGTCTCAAAACACAAAAGAAGCTAGTGACTGTCAGC
AAAAAAGTAGAACGACGAGAAAAAACTCGAGAGAAAGAAGCTAGTGACTG
TCAGCAAAAAAGTAGAACGACGAGAAAAAACTCGAGAGGCGAAAGCTTTG
AACGCAGCACAAATTGAGAAGAATATCGAGAAAGAATTACTGGAAAGATT
AAAGAAGGGAACGGCGAAAGCTTTGAACGCAGCACAAATTGAGAAGAATA
TCGAGAAAGAATTACTGGAAAGATTAAAGAAGGGAACGtaTGGAGATATC
TACAACTTCCCAGAGACAGCTTTCGATAAGGTGTTGGAGGACGAAGAGTT
AGAATCGGATCACGGCGAAatggaagatgaagatgaaattgAACAAGAGt
aTGGAGATATCTACAACTTCCCAGAGACAGCTTTCGATAAGGTGTTGGAG
GACGAAGAGTTAGAATCGGATCACGGCGAAatggaagatgaagatgaaat
tgAACAAGAGGTTGATGGAtttttttAGGAAGAAGCACCAGAATTTATCG
CTGATGAAGACTTTGATTATGATGAAAGTGATATGGAGGTTGATGGAttt
ttttAGGAAGAAGCACCAGAATTTATCGCTGATGAAGACTTTGATTATGA
TGAAAGTGATATGGAGGATTACGGTTCGTTTTCATCGGagagtgaaagtg
aagaagaaatcaaacaagaagaagagaaagaagaaaaagcaacatcttcc
aaacaaaagaaaaaacgaaagaaaatcgaaatcgaatatgagcgagaaac
cgtacccaaatcaaaaGTCAAAGCAACACGCTAAGATTACGGTTCGTTTT
CATCGGagagtgaaagtgaagaagaaatcaaacaagaagaagagaaagaa
gaaaaagcaacatcttccaaacaaaagaaaaaacgaaagaaaatcgaaat
cgaatatgagcgagaaaccgtacccaaatcaaaaGTCAAAGCAACACGCT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:290264..297220 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 709-876:6790 |
| Aaloc | 631-708:6307 |
| Aaloc | 520-630:5455 |
| Aaloc | 445-519:2370 |
| Aaloc | 391-444:2049 |
| Aaloc | 352-387:1510 |
| Aaloc | 175-351:1097 |
| Aaloc | 64-171:642 |
| Aaloc | 16-60:272 |
| Aaloc | 1-15:1 |
|
