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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:2679375..2684261- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037448 ID=XLOC_037448|Name=XLOC_037448|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4887bp|location=Sequence derived from alignment at sc0000005_pilon:2679375..2684261- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCATGAATGGTTTCAACGACATTGTCCTGTTACTTGTGGAAAATGCAA
AGGAGGTATACCCGCTTTTTATAAGAGTTATTACTCTCTGATGAAGCTGG
CCAAAAGTTAAGAATTAGCTCTGGTGGACGCAATTAAGCAATAATCGATT
TTACGAAGTAGGAAAGGAATCGCATGAAAAAATCAAATTTTCTAATTTTT
TAATAGAACTCAATACTTTAAAAAATTACTTATTTTTAGTAGGGGGAAAC
CCTTATGATCCGCACCATCTTTTGTTGGACGCAACTACGTTTAATTGGTT
TGCAAATAGATAAGTCTGTTCCAAACTCTTCTTCACTGACTGAAAAGTTA
ACGCGAAGTTTAGTTTGTTACTGATAGGAAACATTCCGTGTCCCAGACAT
TTTTACGCAAATCTCAGAATGTCTCTGTGGTGGAGCGTAGCTATTTTAAG
CTATCTAATTCGACTAAAGTGACTTTACATTTAACGCATCAATGCAATGG
TATCTGTCACTTATAAAAAAGGGCACTCCTACGGTTTTGTTATCTTGGAT
TTTGTATCAGAAAACTGGGACAAACTAAGGCAGCCACATAACCTGCTCAT
TAAAAAAGGCACTCCTACAGAAAACTCCCAGAAAAGTGGGACAAACTGAG
GCACAGAATCTGCTCGCTAACCAAAACAGGCCGACATACGGTAAGTTTTT
TCAAAATACAAAAAAAACGCCCGTGAGTGGGTACGGCTACAAGCTAAAAA
TGATTTTTGAGTGACCAAGCAAAAGTTTTTATGGCCAAAAAACTCCCAAC
CCCCAAAAGGAGTAAACAATTGACGGTCTTCAAGGTCAAATTAAACTACC
AAGTAGCTTGCGCTATGAAAATTAAGTAAAAATTATTGTTCTTATTGTAT
ATAGTACCCTGGGTATCAGAGGTTCAGTTTTCAAAGAATATATTAACCTC
TGAAGACCAATAATATAAATTTTATCGCGCATGTGCCAATCTAATCACTG
TAGAAAAAATCAAAAATGAAGAGCAACTATTCATATTAATGTCTGCAGAC
TGTATCAGTATACAGTTTACTATTTACGAATTCCCCAGAAACCTCTAAGT
GTAATTGAAATGAGTTCATTTCGAAAGATATCTTTTACACGATCCCCAAA
TGTATAACAGTAATTACTAATTTTTTGATTAAGGGATTCTCCCTTTAATT
GAATCAAAACAAGAAGCCCGTTGGGCGTGAAGGCCCAGCAAAAGTGAAAT
TTTTGCGCGTGATTTTCGCGAATTTCGGAATTTCTAAAAATTCCAAAAAA
TGTTTAACAAGATTTCAAATTTCCCCCAAGAAAGGGATGGCCAAAGGATT
TAAAATTTTACTGCGTCGAACAAAACACAATGAAAAATAAGTCAACAAGG
ATAATTCTCCCTTTCTTCATTTCTTAGAACAGGGAAACATCATGGAAAAA
GTTCCAATCTTGTTCAAATTTACACAAGAGCTGCATTTTAGTCTCCATTG
CCATACACGTTTTTTTTTATAAGAACAAACTATATAAGAACATAAGGCTT
CGAGGCCCAAAAATTTAAGAACATTCTAAAGAACATTCTAAGGCTTTGGA
GACTTAAAAACATGCATTTTCTTAAGAAATTACATCAAAATGCTCAAAAA
ATGCTGAAAATAAGAACATTTTAAGAACATTTTTAGGCTTCAAATCCAAA
AAACTAAGAACATCCGAAGGCTTCGAAAATTTTTGACGTTCTTATAAAAA
AAAACGTGTAATCCATTAATAATCGGTATTTGAAATAATTCTGTGTTGCG
AGTTTGAAAAATCAAACCACCAATTCGTTAAACGAGACAGATCTAGAAAC
AACCATTTTCACATGTAGCATCATGGAAAAAGTTCCAATCTTGTTCAAAT
TTACACAAGAGCTGCATTTTAGTCTCCATTGCCATAATCCATTAATAATC
GGTATATATATTTGAAATAATTCTGTGTTGCGAGTTTAAAAAATCAAGCC
ACCAATTCTTTAAACGAGACAGATCTAGAAACAACCATTTTCACACGTAG
CATCATGGAAAAAGTTCCAATCTTGTTCCAATTTACACATGAGCTGCATT
TTAGTCTCCATTGCCATATCCCATTTTAAATCGGTATATATTTGAAATAA
TTCTGTGTCGTGTTTGAAAAATCAAGCCACCAATCGTTAAACGAGACAGA
TCCAGAAAGTACCATTTTCACACGTAGCATCATGGAAAAAGTTCCAATCT
TGTTCCAATTTACACATTAACTCCATTTTAGTGTCCATTAAAAAAATTCC
AGAATCAGTTTACTTGAAATAATTCTGTGTCGAGTACGTTGTCGAGTTTG
AAAATCATGCCACGTCCCACTGTCACTGTACTGACCGTTGTTTAACAGCG
ACAGATCCAGAAGCAACAGTGTGTCTTATTTAAATTTACACATTTCAGTT
TATTTATTTCTATATTAGAAGCCATTATTTCCTAAAAATAAAGTCTTTTT
GAAAACAAGAAACTTAAAATGACAGTGATTTAAGGTAGAATTTTCAGCCC
TAAAGCTTTATGAGAACTTGAGCAAAAACTATAAGATATGACAGAATGTT
GAAAAAGGTTTACAAAGAAAAATCACTAAAAGGTTTCTTTGGTTTGAAAG
TCTCTAAAGCAAAGAAAATGTTCAAGAAAGTATGAATCAACACGAATCAA
TTTCCTCGCTTCGACCGCCATCTTGTTTTGTTTTGAAAACATTTGTTGTT
TAAGGAGCGCGAAATCAGAAAATATATATTTTTTAGCCAGTACCCGACTT
TAGCAAGCTTTTCCCTGTCCAGACGGCAAAAAGTGTGGTACTGGTATTAA
GCGCCGTTTCTACCAAAACGGACACAAAGAAGGAAACACGGGAAAAAAAT
AGTGAGACTCTCATTAAAGGCCCACTCGCTAGCGCTGGGCCAATAATAGA
CAGACTTTATGTTATGATTCTCTATCACTGACTCTTTTTACAAAGCATTG
ATGACTTTTTTAAGTTGTGTTTTCAAAGACGGGAATAAAAGTACCAACTT
TGAATTTCATCCAAGATCTTGGATGGTCGTCATTGTTACTTTTGTCTTCG
TTGATTACGCGCTGAATAGAATCTCGATTCGTCGGCACAGCGTTAATATA
TGATTTTGACCTGTGCTATTCACGGTACGTATATAGAGCATAAGATTCTA
AGCAAATAAGTATTTATATACAACACTTATACTCAAACACACAAAAAAAT
AATTTCTGCGCAGTTTTGTAATTGTACCCTTGCGCACTTTTGCAATTTTT
GAAAAAAATGGTACATTTTTATCCAATACTTTTCTTTTCAGATTCGTCTT
CTTTGTGATTGACCTTATTCAAGGATACTTAAAAAGCTTTTTAAAAAGCA
CTTTACTTTATTCTTAGATGATTCATTGATCAAAGAACTATTATCCTGAA
AAAGTCACAAAAAGCCGAATTTACAAGGAAGAGTTATTCCGAGTTGTTCC
CATTTGTACCTAAACAGATACGTTTTTGATATTTTTTGATTGGCTGTGCG
CTTTTCATTAACTAAAATCAGCTCTATCATGAACCTTTGTTGCTTCATTA
AAGAGTTATGCCGAAATATGTAATGCCTAGTTATAACTCTTTCAACTTTT
AAATTCGAAATAACTTAAGTGGTTGCATAGTATGAATGTATTGTAAAATA
CATTCATTCATTCTCTTGAAAAGAGTAGTGATACTGATTATGACGCAAAT
GATTGAAAACCGAGTTGTTCCGAGTTGTTCTGAACAAAGGATTGTATTTA
AGATGTTTTCTAAAGAATAATTTGTTTATTTGGCTTCCTAGCACTTTAAA
ATTGGCTAAAATGTTAATTTTCGTTGAGAAATTTAATAATAAAACCCAAA
AACGTAAAGCCAAGTTATAATTCTTTTAACTCGGAATTTTGAAATTAATT
ATTCTAAATCACCACATATCAGGTATACTTTGCAAAAAGTTTCATTTTGT
AAAAAAGACCGATGAAAACTGAAATTATGCAACGCATTTCAAAACTTAAA
ACTCGGATTAACTCGGTTTAACTCCGTTACAACAAATCTTTAGGATTTTT
ATCTACTATCTCAAAGGAAAATTTGGACGATTTTTTGTCAAAATTACAAA
AGTGGGCAGAAAAATTACAAATCTGCGCAGAAATTATAAAACTGCGCATG
ACACCATTCAAAGTTCAAAATCATGTGAAATCTCTTCCAGTTTAAGCTAA
ATTTAACGTCAATTATACTCTAACATAATTTTGAACTTTGAAAGCCTATA
CTTTTTCTATATGTTTGACTATAAGATTTGTTGTAAAGTATTTTTTTCTA
TATGTTCTATCCGATGGTACCAATCATTTGCGCTAAATCAAATTTTAAAA
AATCCTCATTTTTTTACGTATCATTTTAGGGGTTAGGAGTTATGTCTAAA
GAATCTGTTCTCAAAAAAGTTTCAAAATCCTATCTATTTTCGAAACAATC
ACATGCGGTTGCGTCCTACGAAAGAAGTTCATAAGGGTTGGTTGAACCCC
CTACTAATTTGGACGATATAAATTACGAGTAGGGTGACTCTCTTATTGAT
CTCTTTGAAGTTGGTTAGTTGTTAAAACTGAAAATCCATTATTTTCTTTA
GAATTCTCATTGGAAACTATGGCACAAATAACAAAAATTTACTTTTATGA
AAAGGCTTCATCTTTTTGTGGCGGCTCAAAATCACGGGAATATTTTTGCA
TACATACAGAGTACAATAGGACATCAAGCAAGGCACCTAGACCAACTATT
CTTGGAAGCGTAGACACTAAACTTTCGGGCAAATTTAAAAAAAGTGCTGC
TATTAATTGTGGTAATGGGAATCCCCAACGCGTACTT Coding sequence (CDS) from alignment at sc0000005_pilon:2679375..2684261- >XLOC_037448 ID=XLOC_037448|Name=XLOC_037448|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=582bp|location=Sequence derived from alignment at sc0000005_pilon:2679375..2684261- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCATGAATGGTTTCAACGACATTGTCCTGTTACTTGTGGAAAATGCAA
AGGAGTTTCATGAATGGTTTCAACGACATTGTCCTGTTACTTGTGGAAAA
TGCAAAGGAGAATTCTCATTGGAAACTATGGCACAAATAACAAAAATTTA
CTTTTATGAAAAGGCTTCATCTTTTTGTGGCGGCTCAAAATCACGGGAAT
ATTTTTGCATACATACAGAGTACAATAGGACATCAAGCAAGGCACCTAGA
CCAACTATTCTTGGAAGCGTAGACACTAAACTTTCGGGCAAATTTAAAAA
AAGTGCTGCTATTAATTGTGGTAATGGGAATCCCCAACGCGTACTTAATT
CTCATTGGAAACTATGGCACAAATAACAAAAATTTACTTTTATGAAAAGG
CTTCATCTTTTTGTGGCGGCTCAAAATCACGGGAATATTTTTGCATACAT
ACAGAGTACAATAGGACATCAAGCAAGGCACCTAGACCAACTATTCTTGG
AAGCGTAGACACTAAACTTTCGGGCAAATTTAAAAAAAGTGCTGCTATTA
ATTGTGGTAATGGGAATCCCCAACGCGTACTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:2679375..2684261 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 58-291:235 |
| Aaloc | 1-54:4888 |
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