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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000441_pilon:131486..134661+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037421 ID=XLOC_037421|Name=XLOC_037421|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3176bp|location=Sequence derived from alignment at sc0000441_pilon:131486..134661+ (Clytia hemisphaerica_ch_hm2_pilon)
AAACTCCTGGACGATGGATACTATTGGAGCCTTGATAATGGCAAAAGGTA
AAATGAGGGAAAGGGAAATTAACttatttgtttcaaatttcACGATTTCT
AAAATCTTAGTTGTACAAGATTGCAAAGTTTTttcaatagcgctccgcaa
cgcaaacattagcctggatatccaagctcaaaattttagaaaaaataagt
tttacctcagccagacaaagttctaaaattatagagcttggttcacctag
aaatcaggtgaacccctgttgacagattttcctgcatgaatcccatggct
gcaaataaatatatgcacataatgacatgcataatttcaagatgctaccc
cagcagtgataagtCAATTTAGAATGACAGCCTTGACAATAAAATATAGA
Cactgtggtggaaagtctgttagacagaaagtgcaaagtgaattttggag
aaaaaaaattatcaaaacaaaactttcaacccaaaaaaacagcactacaa
aattggcaaacagaaaagaagaattgaagcaaaataaagatataccttta
gttctttatacacgatgcaaccaagtcatcaagaagattaaagaattaaa
acaagaatatctaagcaagtaattggaaagaaaacaaccagaacatctaa
aaattcccatgttttgatcgtCCCaattcttccctaccattattgttatt
tttatttggatgtgtggtcaaacacccaagggagataattagctattcta
ttgttatttgcttcaaaaaagaaaaatcaggaaGATTTGCAAAAGCAGCT
TACGCGCCTTGCTGTTCGCCCGCGCGGTCCATCCAAATACTTAGGCGAAC
ATTTCAAGTCGGCTCACATAGtttcttatacgcgcgccaccattcagatc
tctgattcgcttggaccaaccaatcagaatatccgcataatcatcctcag
atcagaatgcagacgatctaggtaaactagaccgtaaacataagaaatat
caaaatcaagaaaaaagtttacgggctggatatccaggctacgcAAACAT
AATAATTATTACTTTCCAtttttgtacgagttgcaatcccacaatcccat
ttgccttaaaaatttaaaatatttgcaggTTGTTAAATTTATTTAGTCAT
TGGATGCAATTAATAGACTGGCGAATTCAAGACAAACAAGTAGCCACATT
GAGAAAATACAAAGGAGTGCAATGCAAACCAATTAAAAGTCACTCTATCG
TAGTTCTTTGACGTGGTCTAAAAGCGTCTCTGATTAATGTGTAAgagaaa
ttaatgaaaatcttgatgggattggaacaaGTACAAGCACatcaaaagta
ataattatgccGAGAAAGAAGTCTTTCTAGATTCTGCGCAAACTCTGTTA
TTCTTAATGGAATTTCTCTATCAACTGTGGAGGTAACTAAATTAAATCAT
TTCTATTTAGTCCCCATTCTGGCGACAACAAAAGGTTGACTGAAGAAGCC
ATCAATAGGGTGCTTGGCCTACATCCTGAAATGGACAAGAAAGAACTCAA
AGGTATGAGCTTTGTATTAAAgtaattaattttaattaacCTTAATTTTC
GCTCAAATTGATTGATTATCGGCACagtaGtaaACCtttatttatgttAT
CAATCCACTTTGCTTTATTTATTATTACGAGTATtatgtttACttttgta
tttgCTGGTAGTGGTATACAAATGTTCGATTTTTACATAGTAATCATGCT
TTTGAAAACGTTGtaacatttttttacatttcaaaatttgtgatCCCTTT
AGCTGTGCTGTCATCAACTTTCGCTCGAGAAAGGATACCAAAAGGAAGAT
GGAGAGGAATCCTAACTACAAGACGGATTCTGCAAAAAGCAGCCGCAAAG
ATACTGTAAGTTTTACCTGAACTGTGAAAGCAGCAAGCACAAATCATTTT
AGGGTAAACAAATCTATCTCTATTGCCAAGATAATCCATAATACTGCATA
ATTATCATTTATTGATTATGAATGTATTCTTGGGTTGAGACCTGTTTAGT
CTACaaaaaaaCCCTAAGTTTTTAACAACCTTAAAGGGAGAATGTATTAC
TacgcaaatcaaaatatctATACATTTCTAACAGCTCTCTTTTATGTTTT
GTGGTAATTGTAAGAATTTGAGAGAGCGTTTAGAAAATGAGAGAAATCAT
TATATACTTCTATGAAGATATATTATAGAAATCACATCATATCACAAGCA
TCACAAGAaaaaaaaCTTGATATTTGGCATAAAGAAACTCTGATGAACGG
AGTTATTCCCcaTatgaaaattttttcaTttcaaaggcaaaattttgaat
aagtgggaaaaattttttactttgagCAAGATTCTTTCTTTGTTTGAAGT
ACCGAACTTTGTCGCTTTCTCTGTGAGTTTCTTTTGCACAGACATTGTGT
TGTGTGAAAATTATAAAGAGAATCAAGGAAGGCTATTTCTTTGATATCTA
TTATTGAAGATCTTTTGATCTAGTAATACACTCTCCCTTTAAGaCctttt
tcaaTttaaaaagacttttgttgtgcgcagatatgtaaTttcGAgCTACG
CAATTATGTAATTGAATCCCTGCGCAAATATGTGGAACTTGTCTCAACTA
CATATATGCGCAGATCGCAGAAATCACATATCTGCGCTAAATAATTACAT
ATCTGCACACAACAACcttaatAaatataatttttcagaCAATGATAAAA
ACATTAAATCAGTTGTATATTAATGAATTTATCAACTTTGGTATTACTTG
CCTGAGGAGCTCTTAACTTGATCATAAGAATTTTCCCAGAGGGCCACAGA
GTGGGACCGTTACGTTGTTCTACATTATATTTTGGTTCCAATGGCCCTAA
AAAATCTAACACAGTACTTTTCTGTAGGTCAAACTTTTGTCTATTCTAAA
TGATTAAACTGAAAATTCTGGCAAACAATGATTAccatacAttttgaaat
atttaatacaatattaaatattgaaattgaaaacatAtttttgcttcaTc
AATAATTCTCCTGATTCGTTTTCTTTATCTTTACAGAAGTTAAACAATCG
CAGACGAGCACTGAAGAGTCTAAACGTTGACGCAATGACACGTGCAACCA
TCTCAAAATATTGGTGCCTGAGTTAA Coding sequence (CDS) from alignment at sc0000441_pilon:131486..134661+ >XLOC_037421 ID=XLOC_037421|Name=XLOC_037421|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=666bp|location=Sequence derived from alignment at sc0000441_pilon:131486..134661+ (Clytia hemisphaerica_ch_hm2_pilon)
AAACTCCTGGACGATGGATACTATTGGAGCCTTGATAATGGCAAAAGAAA
CTCCTGGACGATGGATACTATTGGAGCCTTGATAATGGCAAAAGTCCCCA
TTCTGGCGACAACAAAAGGTTGACTGAAGAAGCCATCAATAGGGTGCTTG
GCCTACATCCTGAAATGGACAAGAAAGAACTCAAAGTCCCCATTCTGGCG
ACAACAAAAGGTTGACTGAAGAAGCCATCAATAGGGTGCTTGGCCTACAT
CCTGAAATGGACAAGAAAGAACTCAAAGGCTGTGCTGTCATCAACTTTCG
CTCGAGAAAGGATACCAAAAGGAAGATGGAGAGGAATCCTAACTACAAGA
CGGATTCTGCAAAAAGCAGCCGCAAAGATACTGCTGTGCTGTCATCAACT
TTCGCTCGAGAAAGGATACCAAAAGGAAGATGGAGAGGAATCCTAACTAC
AAGACGGATTCTGCAAAAAGCAGCCGCAAAGATACTAAGTTAAACAATCG
CAGACGAGCACTGAAGAGTCTAAACGTTGACGCAATGACACGTGCAACCA
TCTCAAAATATTGGTGCCTGAGTTAAAAGTTAAACAATCGCAGACGAGCA
CTGAAGAGTCTAAACGTTGACGCAATGACACGTGCAACCATCTCAAAATA
TTGGTGCCTGAGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000441_pilon | genome | sc0000441_pilon:131486..134661 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 244-333:3087 |
| Aaloc | 142-243:1804 |
| Aaloc | 49-138:1462 |
| Aaloc | 1-45:1 |
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