|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000237_pilon:354427..361098+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037420 ID=XLOC_037420|Name=XLOC_037420|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6672bp|location=Sequence derived from alignment at sc0000237_pilon:354427..361098+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATTAAAGCCAAATACAGGTAATTAAGAGCAAGGAGAAACAAAAT
AcctttttaatatttaaacaaaattattagcaaatattttttggaacTAC
CTAGGGGTCCTAAAAATTAACCCATGTCTATTcctctgttaccaactttt
ctccgAATCAGATCATTATAGTTTTACTGACTTTTTGGACACTGATGCCA
AATGGTAATGCTCAAAACGTGACagatttcgtgttttttctGCACAAAGA
TATGTATATTGCCAACAATTTGTCAACACTTTTTTGTACAGAAAACATTC
TGATGACAATGCCCACAATTTACAACTATTTGACTTCCAATAAAATCAAA
CTTCTGAATAATTGTCGAAACAGTAAAAAACGCTATAAAACAGTTCTTCT
TCATGCTTGCAAGCTGTAGTCTGcgttttctttcttcttatcgtttttct
attttcatctGACTTTAACCATCAAGTatgtccattcagcatgttgcttg
ttgattGAAGATCAGGgaacttaaagggataatcagatgacaaattaaat
ttggctTATAGACATCTTCCATGGTCTGAAgtaaaacccaaaaatatttt
agcccaattattttcaaaagtcgtTGCCTGTTTGAGCAATACGGTATGGT
AATTTACTTGTCATCTGTCAAGGCATTGTGCTTTATTTTAAGGACCCTCA
GGGTTTGAATTAAAAACTTTGTGAATTGTGAATCACAGAGTCAACTTTAg
ctcttataaagaaaatcacGAATCAAAAGCAACAATCCATTGTCGTTTGa
agcttcaaaatttcaagaagtTCATTCAAACCACTTATAATGCGCAACAA
ATTCTATTTGCCCAAACCATGATGCGTTGGCGtaaccaaaatattaaaat
gaaagATTGGCAGGTTGTCGTTTACATTGTTGATTTACATTAGAATTGTG
AAGTCtattctaaccaatagaatgtcTTGGTGTATAgataaataaatatt
caatttcattttggttcaattgtatataataaaaagtttatttATGTTCT
GaattcatttttgtaaaaacgttttcatatttcaaaataagttCTAAGCA
CAGGGATGACCCACTATGACGTCAACTTTTGCATAAttcattttttgcat
ttttggtgtACTGTCCATTGAGAAACTTATTCCAGGGAAATCTTATTCAG
CATGCTGGTTTGCAAATGAAATGGAGTatgtcaaatttcatttttgtctT
GTTATCCCTTTCAAGTTTCAGTCATAATTCAAATtatagttttatttttg
ttcttgatttttttcagattcgTAGTCATGTCACAAAAGGGAAGACGTAA
GGTAAGAATTCTCAAACACAAAGCAAGCCTTGTGTTATCTTCCATTCCTC
ATCATTTTGATAAAGTAGTCTGTTGACTTGAATGTTAACGACTCGTTCTT
GCTAGTTCCTTGAGAATGACGCTTGTCGATtctcaaatttcattttaagg
GCCTGGctttttcatgtcaaaaaaatacagaaaccactgaaaagtgaaaa
gtgaaaagatactcacgaaaaCCTTTCTTCAGTACCGAAATTTTCCACCA
TTTTGAAATCAATATTATGTCTCGCTAACCTTAACTTCAGAACAATCAAG
ACAAGACAAGCGGTCACTTGTGAACGCCCATAAGCCTTTTATACTGAGAA
AAATTCCCGCTTCTTCTGCACTCTTCTGCACGCTTGCACTCACAATATCT
GTGACATCACCTGGTTTTACAGAAAACACCGaaaaaCTCAGAAAAGTGTC
ATGAAAAAACCTGGGAAAGCTCAGTGGTTGCAGGAAGAGGGTTTTGACTG
GAGACTTTTTGAAAACACCAGAAGCACAGTAAACACTTCTAGTCTGGAGG
TTAGGTGTTTTCGGGATCccaaaaatgcagaatttcaggtttctgtttca
aaatttctgcaCTTTCAGTGTTTTCTggacttttttgacatgaaaaaaaC
AGGCCCTAAGAGAACATTGGTAATGATTTCAATGCCTTAGGCTGCATACC
ATTTATACATCCATCCTATCGAACCCAACCAGTTTTCTAAAGTCTAAATG
GTTTGGAGTGGTTTAGCTAAACTAAGATAAATTAAGATGACCTTGCAGTG
TCAGATTGTTTGTCGCACCGctgtttttaattcaaaatggtagactagGC
GGATaaaaaaaTCAATGCTTTGATTTAGGCTTTTTCGTCCGCTTCTTGTT
CGCTCGTCTAGaaaaacgggagtttaaactcaggcgttgaaataaactaa
aatcaaaacaaaactacaaaaTGGTTCACTCGGTTTGCTAAACGAATCGT
TTAGCTATCGAAGCTATCTTGCAAAAAAGCTAGTTTGGTTCGATACATTG
TTTAGGTAAACTTTTAAATGGGTTGATCGGTTTGCTAAAACTTTGGTTCC
ACTTCGATAAGATCTAAGCTAAATGGTATGCACCCTTAATAATCTTCTTG
Aaacaaaaatagacaaaaattttgaatttttacttctgaaaagataaatt
tttggtcaaaataaatGCAGTAAAGAAGGCTAGGCACCACAAGAACAGGT
TAACATGCTTCATCCCACCATCACAAGCAAAAAATGTGTGTCGCATAATa
gtttctttttggacctaccaacAAAGGTAGTCTTTTAACCCTATCTGCCC
cgggaaccccccccccctcctgaTTTTTTCTCCCCCAAATTTTAACCGCG
AGctgaattcttttcaaattttctgacttCTCCAGAAATTTACCCTTATA
CATGTATgtattccgaaaaaaaattcccaaaatccAAATATTACAGCCTG
AGCGGCTACGGATTCGGTGGTAACCGCCCAAAACgccaaaatctgaaaat
ttcaaattgccaTAAAATCTGAACCACTTGTCCAagtcatttgaaatttt
gtacagtaATTCAGATTCAGATGTAGAATAAGACTGCATAAAAATTTTTC
CCAGAATCCCTTCATTTCTTGACCTCAATTACCCAgggggggggAGCGAG
TGGCGATTTCGCGTTTTTCGCAAGATTTTGCcgaattttaatcaaaattc
tcATTCAATGGcatttttttctattgaatCTTGTTTTATGTTGTAAATGT
CAactctgtaccaaatttcaagttcatTGCACCATTTTTCAGGGATAGTT
ATGGATAATGTGTCATCACACGCAATTTTAAATACAAAGATTTTAGAACG
TTCCATAAGAAAGAACGTTCGAGGACGTTTTACAATGGGCTCGAACCATA
CAGAACGTTCTAGAACGAAATGAATTTATCGTTCCTTCTGACGTTTCGTT
CCGTTCCGTTTCTTTTTTCACTTTACCATTGGAACGCATTCTGGAGATAA
AATGTTCTAAAGAACGCTCTATAACGTTCCGATATCGTTCTATAACGTTC
TGATATCATTCAGGATTGGCCCTAAAAATCATATCTCTGCTGCCGGAAAA
ACTTCTTACATGGCTGGCTGACAAATTAAAGTAATTTGTGTATCTACAAT
TTTAGAAACCTTCACCTTTCTTATTTGTCACTTGTTACTAATGTGGCTTT
AGATAACGATTTGCGATCTCTATTGCCTGTTTGTACTTATTTTATaccac
tgagacaggggtgtacacTTTAAAGAAATCCTTAAAAATCTATAATTTGC
TAAATAAACGTTAAGAAGTctccatgaaaaaaGAAAATCTTTAAAACCCT
AACGAGAACAAACCATGATTTGACACAGAAATTTCTTACCTTTGGCTAAT
GATCTTTGGGGTCGTGTTTTACATTATGATGCAAATCACCATTATTAGAA
GAAGATAGCAGAATCAAAATAGGAGAACTgactttataaaaaaattaaag
aaactcTTGCAGTAAACACTGGCTTCAAAGTATTCTTGCTTTTTTCCTAA
TTTGTTTGAATAAACAATACCACTGTGTACTGTGCACATAAAGACTTCTC
TGATCAGCTGTCTTCTCTCAACTCAAAGCTTGAAGATGAAacatttgttt
atgtttttgttttacaaagattttgaaaaaaaaatttgaacattcGAATA
TCAAACAAACGTTCAAAAATCAAATCCAAACGTTCGATTGACACGTTCGA
ATTTGTCAAAGACCTATATACACGATAGAAATTGTTTTTCGTCTACCGTA
ATTTCAAAGAAAGCGTCAGAATGTTCTGAAACGTTCTGGATCGTTAGTGG
AGCGTTCTTAAATTATTGACCCATTAAGAACAGAATTAATGTTTACAAAT
TAGGAACGGAAGGAacgtttttgcaaaaaagatagaacgttcttataaaa
ttttgaacGTTCAGGAACGTGCAAGGACGCCAAAGAACGATAAAGGACAA
TAAGAAAAGCGTTCAGAACCTTCTGAAAGATATTGTATTTAAaatcgctt
gtgatgacacattACAATTAtccgaaaaaccgcaaaaaaacttttgactt
tgactggttccgccattatgaaattttgattttttgtagaATTTTCTATG
ACACTAAATATCTGCATATTTGTGAGTAATTACAAAAAACAGAAGTGAAA
AAGCTTATTTCTGcaaagttttatgttcttttgaaaatatagctataggt
aggtccattcagcgcGCTACTTGTTTCTTTTCATAGGATAAAAAGTGAGG
GGATGAACCCAaaagacaacaattttgtctCAGGGACAAGAATGAGAGAA
ATTGTCCCAGCCTAGAAAATTTTATCTTGTGTTGCCATCAATTTCTTTGG
AGAGATTCATACAATTCTTCGGTTTAAGATTACTTATTCctaggaaaatt
taaaaagatttgcACTATTCCAGTGTCTTACATTGTCTGCAGGCTGCGTG
ATGCCAAAAGTTACTTTACAAAAACTTAGGAAGTGCCTTAATAATCGTAT
TTATTTTTGcttgttacaaattttcgtgaatcgcaaatttttttcgaggA
AACTTGTTTTGCAtgtattaaattttgcaatttccagtttctggaaattt
ttgcgtcaatttaatttcacgattCACTAAATTacgtattttcaaaaagt
gggaataaaGCAAGACAatgactgattttgcttgaaacacatgGTATTGG
GTGTACACATAATAACTAAATAGtatcaaacattttttgcatttatttaa
tttcgcgactttgtacttttgaaaaatttaaacagtattaaaatGAAGAA
ACCGCAAAAATTTGTAACATGAAGAGTTGACTTTTTTCAACCATCCAATC
TGTCCTTTCTGTTCGTTCTCTCCAGACCATTCCAACTGTTccaaaaaaca
cgaaaaaagtCTACTTGGATTGTTTTTCTCTGGTCTCACatacccaaatt
ttccgtaAGGCTCCTTATGGCAAGTGTGTCCACAGATTTTGCTCTCTATT
TTGACTTcccattttaaaaataatgatagatgtattttacagaaccgAAA
ATAAGTTGGCTTATATTTCACATAATGAAATTCTTTGAGGAATTTCTTCA
CTATTCCGATTATGTAAAATAAATGCTATGTTATCTTCTGTGTTCtgtaa
aataaatataaaaaacataaacaaaaaactgATCACTAAGAATTGTCCAA
ACCATTCTGGTGAAATGGAGACCAAATCTGGCACAGGAATGTTTTGGACA
GATAGAATGGTTTGGATGGTTGAAAAATGTCCACCCGAAAATAAATACCA
TTAAGGTAGGTtggatggagcatgttgtattgcaaaaacttgaaaaagct
TTTGGTCTTTCCTTAAGGTTCCCAAAATTCATGACTCTATTTTGTTCTCt
tgttgtaataaaatcttaaaatctgcATACTCCTATGCTACAATATCTCT
ACTGGATAAGTCAAACCtatttcactgaaatttcagtGATTTTCTAATAC
TAGTAACtttttttGCAGCGCCTATCTCCAAGGGCCATGGCCCAGTATTa
cgtgaaaatgaaagtggatCCTTcacattgttacaagaaatatATAGATG
CATCAAAAGGTTAGATGGATTATCTATTAAAGGATTTGTCAGTACCAGGA
ACATTACTTTAACCAGattaattttcgccatttacgaatttttgctattt
tggcgattttttgcgaatttttgccatttttgcaaaattaaatcctgCGA
AAACGTTCGGGATCGCTCATACATGAAATTAAATCgacacaaaatttttg
aaatggcATTTTCAGCAAAAACTATGTCTACACTGTCAATATTTAGCAAA
AAAGACCATTTTGAAGACTATTCACAAAATTAAATCCACACGAAATTAAA
tcttgcgaaatttaatcctatattaaagtataattttttgaAGTAGACCA
CCACTCCTTAGGGTTCTTTTCATATTGGAAAATCAGTGCAGTGCCAGTGG
TATTTGAAGAAAGCTAAGTCCATGTTCTTTAGATTTTTATACCATATCAA
TTCTTCTTAAGGATGGGGAGTATTCgctggaaaaaattttgagaagaaCG
ATTTCATCCTTGAGTATCGTGGTCAATTGAGAAGCAAAACAGATATGGAC
CTACTGCAAAAACAAAACTCAATCAAAGACACCTACCTATATGACTTTTT
GTTCAATGGACCTAAGTGGTAA Coding sequence (CDS) from alignment at sc0000237_pilon:354427..361098+ >XLOC_037420 ID=XLOC_037420|Name=XLOC_037420|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=618bp|location=Sequence derived from alignment at sc0000237_pilon:354427..361098+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATTAAAGCCAAATACAGATGATGATTAAAGCCAAATACAGattc
gTAGTCATGTCACAAAAGGGAAGACGTAAGattcgTAGTCATGTCACAAA
AGGGAAGACGTAAGCGCCTATCTCCAAGGGCCATGGCCCAGTATTacgtg
aaaatgaaagtggatCCTTcacattgttacaagaaatatATAGATGCATC
AAAAGCGCCTATCTCCAAGGGCCATGGCCCAGTATTacgtgaaaatgaaa
gtggatCCTTcacattgttacaagaaatatATAGATGCATCAAAAGGATG
GGGAGTATTCgctggaaaaaattttgagaagaaCGATTTCATCCTTGAGT
ATCGTGGTCAATTGAGAAGCAAAACAGATATGGACCTACTGCAAAAACAA
AACTCAATCAAAGACACCTACCTATATGACTTTTTGTTCAATGGACCTAA
GTGGTAAGATGGGGAGTATTCgctggaaaaaattttgagaagaaCGATTT
CATCCTTGAGTATCGTGGTCAATTGAGAAGCAAAACAGATATGGACCTAC
TGCAAAAACAAAACTCAATCAAAGACACCTACCTATATGACTTTTTGTTC
AATGGACCTAAGTGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000237_pilon | genome | sc0000237_pilon:354427..361098 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 151-309:6514 |
| Aaloc | 58-147:5969 |
| Aaloc | 25-57:1319 |
| Aaloc | 1-21:1 |
|
