XLOC_037413 (mRNA) -

Overview
NameXLOC_037413
Unique NameXLOC_037413
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000187_pilon:673985..675487-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037413 ID=XLOC_037413|Name=XLOC_037413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1503bp|location=Sequence derived from alignment at sc0000187_pilon:673985..675487- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGCTTTTCATGAGCAAACCATACGATACAGGAGGACCCTTATTATC ACCCGTCAACCTTCAAAAAGAATTCATTGCTCTTAAACAGGAACGTGATA TAAACGATCGCCAATCGGGATACATCCATGATGACGTCATTGTTGGAGGA CACCATATTGGGGACCATGATAAAGTCCTTTTTCATGACGACATTCGAGA TCGTAATTTATTTGACATGCCGATCGTCACGACCAACGAATGTTCTATAA ACTCTCTCTATCACACTAACGAACCTCAAACACCGACAGGCCCACATAAT CACCATACAACCCCTAGTTTCGTCACATACCAAATCTCTTCAAACACGAA CCAATCAAATGGCTGGAACAACCTTATGGATGATTACTCGCATCCTGGAG GCGACACGAATGACCTTCACGATTCATCGGAGACTTTTTCTTCGTTCAAT GATCCTGTCTTCACGTTTAAAGACACGGGCGACCAACACAACGCTGATCC AACCTCGCCACCACACCTTTCAAAACCACATTCGCTTCCAGCTCTTATCC TTACTGATAAATCGCCATCTCGTTACAGCGATCATACTTCACCCACAGGT GTTCCGTTAACGCCCTTGACGCCTCTTGGCGGTGTCGTTCCATTCGGAAG CCCCCCTCACAACAGTGCTTTCTCTCAACCGACCACTAATCGTGATTTAT ACAAAGACTTATGTTACGCGACCAATCGGCAACAAGAATACCCGCCCATC TCACCAAATGAAGAAATTCCGCCTCAGCTCCCACCCCCGATGATTCATCA TCAGCAACGAAGCCCGAGTTTCAACGAAATCCTACCGTCCTCTCAAAATC AAGTTGGTCGTCCAAATAACACTCAAGAAAATGATATTTTCATACAACAA CAGACTCCTCGAGGAGGCGGTGGCGGGCTTTGTAGTCCTAATGGTCCGCC TACCCAATACATCAAATTGAATTCGTCTTATCAGCAACCGTGTGGAAATA ACACAAGTTCAGTTTTAAATAGTTTATACCAACAGGAACATAACATTAAC ATGCAATTCGGTGGTAACATGTCAGGAGTTAGTTTCCTAACCACTGGACC CCCACCTAATGATAATATCGACATTAGCGCAGGTATGGGACCCATATCGC CGCACAACGGTGGCCCATTTATGCCAGAAAAAATCAAAGTTAGTTGTAAT GAAGACATTGTCAATGATTTGAATTCAAAGAAAGTTGGAAATAAAGGATA TTTATGTGAGTTGTGTGGGAAGTTGTACACAAGGAAGTACGGACTGAAAA TTCATATGCGAATCCATACCGGTTTTAAACCTTTACGATGTCAGTATTGT CAAAAACGTTTTGGAGACCCTTCGAACATGGCTAAACATATTAGACTACA CGCTGTTGGTGATACTCCGTATAAATGCCCTTATTGCGCAAAGGTTTTAG TACGACGCCGAGATTTAGAGCGCCACATTAAATCGCGTCATCCACAGGGG TGA

Coding sequence (CDS) from alignment at sc0000187_pilon:673985..675487-

>XLOC_037413 ID=XLOC_037413|Name=XLOC_037413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3006bp|location=Sequence derived from alignment at sc0000187_pilon:673985..675487- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGCTTTTCATGAGCAAACCATACGATACAGGAGGACCCTTATTATC
ACCCGTCAACCTTCAAAAAGAATTCATTGCTCTTAAACAGGAACGTGATA
TAAACGATCGCCAATCGGGATACATCCATGATGACGTCATTGTTGGAGGA
CACCATATTGGGGACCATGATAAAGTCCTTTTTCATGACGACATTCGAGA
TCGTAATTTATTTGACATGCCGATCGTCACGACCAACGAATGTTCTATAA
ACTCTCTCTATCACACTAACGAACCTCAAACACCGACAGGCCCACATAAT
CACCATACAACCCCTAGTTTCGTCACATACCAAATCTCTTCAAACACGAA
CCAATCAAATGGCTGGAACAACCTTATGGATGATTACTCGCATCCTGGAG
GCGACACGAATGACCTTCACGATTCATCGGAGACTTTTTCTTCGTTCAAT
GATCCTGTCTTCACGTTTAAAGACACGGGCGACCAACACAACGCTGATCC
AACCTCGCCACCACACCTTTCAAAACCACATTCGCTTCCAGCTCTTATCC
TTACTGATAAATCGCCATCTCGTTACAGCGATCATACTTCACCCACAGGT
GTTCCGTTAACGCCCTTGACGCCTCTTGGCGGTGTCGTTCCATTCGGAAG
CCCCCCTCACAACAGTGCTTTCTCTCAACCGACCACTAATCGTGATTTAT
ACAAAGACTTATGTTACGCGACCAATCGGCAACAAGAATACCCGCCCATC
TCACCAAATGAAGAAATTCCGCCTCAGCTCCCACCCCCGATGATTCATCA
TCAGCAACGAAGCCCGAGTTTCAACGAAATCCTACCGTCCTCTCAAAATC
AAGTTGGTCGTCCAAATAACACTCAAGAAAATGATATTTTCATACAACAA
CAGACTCCTCGAGGAGGCGGTGGCGGGCTTTGTAGTCCTAATGGTCCGCC
TACCCAATACATCAAATTGAATTCGTCTTATCAGCAACCGTGTGGAAATA
ACACAAGTTCAGTTTTAAATAGTTTATACCAACAGGAACATAACATTAAC
ATGCAATTCGGTGGTAACATGTCAGGAGTTAGTTTCCTAACCACTGGACC
CCCACCTAATGATAATATCGACATTAGCGCAGGTATGGGACCCATATCGC
CGCACAACGGTGGCCCATTTATGCCAGAAAAAATCAAAGTTAGTTGTAAT
GAAGACATTGTCAATGATTTGAATTCAAAGAAAGTTGGAAATAAAGGATA
TTTATGTGAGTTGTGTGGGAAGTTGTACACAAGGAAGTACGGACTGAAAA
TTCATATGCGAATCCATACCGGTTTTAAACCTTTACGATGTCAGTATTGT
CAAAAACGTTTTGGAGACCCTTCGAACATGGCTAAACATATTAGACTACA
CGCTGTTGGTGATACTCCGTATAAATGCCCTTATTGCGCAAAGGTTTTAG
TACGACGCCGAGATTTAGAGCGCCACATTAAATCGCGTCATCCACAGGGG
TGAATGACGCTTTTCATGAGCAAACCATACGATACAGGAGGACCCTTATT
ATCACCCGTCAACCTTCAAAAAGAATTCATTGCTCTTAAACAGGAACGTG
ATATAAACGATCGCCAATCGGGATACATCCATGATGACGTCATTGTTGGA
GGACACCATATTGGGGACCATGATAAAGTCCTTTTTCATGACGACATTCG
AGATCGTAATTTATTTGACATGCCGATCGTCACGACCAACGAATGTTCTA
TAAACTCTCTCTATCACACTAACGAACCTCAAACACCGACAGGCCCACAT
AATCACCATACAACCCCTAGTTTCGTCACATACCAAATCTCTTCAAACAC
GAACCAATCAAATGGCTGGAACAACCTTATGGATGATTACTCGCATCCTG
GAGGCGACACGAATGACCTTCACGATTCATCGGAGACTTTTTCTTCGTTC
AATGATCCTGTCTTCACGTTTAAAGACACGGGCGACCAACACAACGCTGA
TCCAACCTCGCCACCACACCTTTCAAAACCACATTCGCTTCCAGCTCTTA
TCCTTACTGATAAATCGCCATCTCGTTACAGCGATCATACTTCACCCACA
GGTGTTCCGTTAACGCCCTTGACGCCTCTTGGCGGTGTCGTTCCATTCGG
AAGCCCCCCTCACAACAGTGCTTTCTCTCAACCGACCACTAATCGTGATT
TATACAAAGACTTATGTTACGCGACCAATCGGCAACAAGAATACCCGCCC
ATCTCACCAAATGAAGAAATTCCGCCTCAGCTCCCACCCCCGATGATTCA
TCATCAGCAACGAAGCCCGAGTTTCAACGAAATCCTACCGTCCTCTCAAA
ATCAAGTTGGTCGTCCAAATAACACTCAAGAAAATGATATTTTCATACAA
CAACAGACTCCTCGAGGAGGCGGTGGCGGGCTTTGTAGTCCTAATGGTCC
GCCTACCCAATACATCAAATTGAATTCGTCTTATCAGCAACCGTGTGGAA
ATAACACAAGTTCAGTTTTAAATAGTTTATACCAACAGGAACATAACATT
AACATGCAATTCGGTGGTAACATGTCAGGAGTTAGTTTCCTAACCACTGG
ACCCCCACCTAATGATAATATCGACATTAGCGCAGGTATGGGACCCATAT
CGCCGCACAACGGTGGCCCATTTATGCCAGAAAAAATCAAAGTTAGTTGT
AATGAAGACATTGTCAATGATTTGAATTCAAAGAAAGTTGGAAATAAAGG
ATATTTATGTGAGTTGTGTGGGAAGTTGTACACAAGGAAGTACGGACTGA
AAATTCATATGCGAATCCATACCGGTTTTAAACCTTTACGATGTCAGTAT
TGTCAAAAACGTTTTGGAGACCCTTCGAACATGGCTAAACATATTAGACT
ACACGCTGTTGGTGATACTCCGTATAAATGCCCTTATTGCGCAAAGGTTT
TAGTACGACGCCGAGATTTAGAGCGCCACATTAAATCGCGTCATCCACAG
GGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_037413XLOC_037413-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000187_pilongenomesc0000187_pilon:673985..675487 -
Properties
Property NameValue
Aaloc1-1503:1504