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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:225775..230977+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037403 ID=XLOC_037403|Name=XLOC_037403|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5203bp|location=Sequence derived from alignment at sc0000059_pilon:225775..230977+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTGTGATGGAGGAACAATCCCAAAAAGACATGAACTCGTCAAAAC
GGCAAAGCGACCTGAACAGAAGGATAAAGACATGGATAGAAAAGCAAAAT
GGTCTACTTGTACAATCAGCCAACAACCATTATCAAGTCCTGTTGTTGCT
TGCGAACTAGGGAAGCTTTACAGGTATATTTTGTAAATGTGTTGGTACAC
ctcatcggaaattccacaaaaacaagGCCGTTTGTAAAAAATTGTTCGGT
TCCCGTCACCCGACCAACCGTGATTTCTACTGAAAAATTAGAGTCGGAGA
GTCAGAAACAATTTTTCCTGACAGCTGAAACTCCACCATCACCCTCCATG
TTTTCTTTTCTGAGAGAAAGAGCTAGAGCAAACGCTAATCTAACCTCCAA
GCAGGTCTTGAATGCGGAATCTCATCCCACGCATGCGCTCTAATAAAAGG
GATGGAACCGCAGGATTATATGCCTTAGCAATGATGATCGGTTATGAGAC
GCTAATCTCAGCCaaaaaaaCAATTCGAAACCCGTTAATTCCGTTTTCAT
CCCGATTttcatgttcaatttttcattgcgGACCATATaagcatcaaaac
aaaccagcgGAGCTTTTGTGAAGTGAAAAAGAGGCTTAGGGCGATCGAAC
GTCCGTTTACCGCccttttctaaggaaaatttcCTCCTCTCGGACTGTTT
CgttcaaacagaaaatatttttctaccgaccgaccgaccgacctaCTTTT
TTATGGTTGggatgacgggaaccaaggGATTTTTTACGAACAGCCCAATC
ACGCTAAAATGGATCTGTTGAAATTGGGAGgcagccctgtgaatccaggt
cggcattccgcaatgccgacctgaaagccgacgtaacttgagctgaagtc
AGCTTTTATTTGCAGACGTAATTTACACTCTAAGTCGGCGTgccgacaaa
agaaatgttttgggttGGCAAAGCCGacataaagaggaaaaatattattt
gttaggttaatctaattgtgttatcatttgataacacatgataatcgagc
ctcattccattctctttataaaacataaaacttaatAACACAATTATAGA
GCAGCTGAATTTGTTAGTTCGTTAATTTTCTTCCTATTTTGTCTTTGACG
ACCTAAACAAGCTTCTTAGGacggctttgccgacctaaaatgacTTTGCC
GACCTACGGCCGGTTTTGGTCGGCACTTGAGTGCCGAtatgattttgtct
gaattcacagggctggggaggtaaacataaatggtAGCGCGAGTAGCGCT
AAAAGTTCCTGCGTAAAACAAGATAATTCATTTGCTTATATCTGGCTTGT
TTAcagtgagtggtcctaaatcccacagccctgcctaaatccaacCTCCC
AAATAAccgctatgaaaaaaattctatgtttacaaagattccctctccaa
gttgaacaaaaaactatattgcaagaaatctcgaaacaaaacatctaaca
agacgactaaaatttcaagatgtcaattaatgtgataagaAAAGTGTTAG
TTGTAATAATAATTACCTCTATAATTCTGAATCtgtgctcgtgtttaaaa
cgttaacaattttgtaattagaaattatgtttttgtataaaaagcagtta
atgttttggttcaattggttcagtgtaaattcaaatctctcagtttagtt
gacactttggtatcttcatcgCATCACagtgaaaggtttgtttttatttt
agtttgtatctttgaaagaccccatcggatttaggcagggctgtcggatt
taggaccactcacagtataccgtgagattgggtaacttgcatcagtggag
gctaacatgcatatccctcaaatgaaagacctggctggtcattaaaatac
aaatttaaaacaaaacaaaaatggtagagtagagctgcgagcggagctgt
gtaattgtattttaatgaccagccaggttattcatttgagggctatgcat
gttagcctccactgatgcaagttacccaatctcacggtatgttcctaaaa
atacactgaatttgaaaaaaacgaacaaaacaaagctttcaagatgctag
cagaagcttaaaaaagagaaaaacaacaacttcggtggttcttcagttga
tttggaggctcttttggcatcaatattttgggtgttttttaaggcttttt
gcctgaaaactgCAATATCGcgctttgtttacctcccaaaaattgttttt
ttctcaaccCCCTTATTTAGGAGAGACAAGAGCGACTCACTTTCTGTTAG
ACCCGCGTTTTGACCGCGCTTAAACGCGTTTCTTAAATATGGCCCGatct
atattattacttttcacgaaATTCTCATGATGTAGATAGGCCTTTAGACT
GATAGACCCTAACCATCCTAGGTCCACCAAACATAAGCAGAACTCAACCT
AATTTTGCTAGAAGGGAGAAAGTTCAAAACTTGCACAAAATGATGGGAAG
GCCAAAGATTaacaaacaaagaaagaaaagtctcctagttaagagaaaga
aatctcctacttaagagaccttctcttaaatagagtatatctcttattta
gggTATAATCCTCTACTGGCAGGGAGggtttttaaacaatttttttaact
gcTCTaaaccagacggtactaatcaaaCGTTTGATAGTGATTGAAGTAAC
CAATAATGGAGAGGTGcaataatgataaataataatCAGTCTGTCGCAAA
AAGGTTTCATATTaaaaaaaCTTAGTATCCCtatacaaaagttgtctttt
ttatttcccAAACATTTCGTTTTACAATGTGATTACTCTTGCggtcagtc
gggttcaacatataTACACGTGTGACTAGTCAAGTGACTGAAGTGGTTAC
TAAAACAACACAGGGACAAGTGTCTAAGCAACACAGATTATTTTTAAAGT
AAACCAGCCGTATTAATTGTATAaagatccagactccacctcaattcgca
agttcctagcaaaataagagcccaataagagacactctgataaaactcca
aaagagacagggttgtaagctttaaccctattagccccaggggtgGGTAG
AATCTagcacgctggagttcttttgtgtatatctcgaaaaaaaaatttta
aacgacttgaaactttctgactctttacaaaattttactaagagtacttg
tacaaaTCTTTAGGGTCATATAGGTcctccagatcaggttttatgacttt
attgtgaaacatgacataaaacccaacTAAAATCgctgaaaactcaaaat
tttaaagtgctgataacttctgaactatattcaatcattttcaaattttg
acacgtgataggcattgacaatataaatttgaaaaataaaaaaaaaatta
aaaattatgacatcatcattttatgacgtcatcaatttttaaaaatttta
ctcatcttcagcataaattttaagaaaaaatcttcattgaaAATGCAAAA
CCGACAATTATATTGaattatctttcagaatctcTAAACAGaatttaaat
atctttattggttcaactgtaatagacatttttgtaaaccatatatttgg
gcttgtttccgacaggtggaaattttggaatgacgtcattggtttttgaa
tgacgtcatcaattttttttctttctggaattttgtgtcatgatggagaa
catctgtaccaaatttcatggccatagcagCTCTCCCAGATCAAAAATAA
TTGAGGATGGTactggtagattctacccccctggggatacaataATCTAA
AAAGCTTGGGGTTAATAGGATTAAAAggacattaaaaaagaaaattgaat
ggTGGAAAAGCTATTTTTTATCTCTACTCTAAATTAATCTTGGTGAGAAT
GTCAATAGTTACACACGTGTATAGAGTCTGTAGCATTTTGTGGAAATACA
AATCTAGTTTTCAATATCAGTGAAAAAGGTCCTGTATTTCTTTTGCCATT
GTAgttataatgaaaaatttaTGtatcatgaaaatttgaaagcttATTTA
ATACTTTACAGCAAAGAATCCAttatagaatttcttttggatcGATCAAT
ATGTGAAACAGCAAACCACATCAGGAATTTGAAAGATGTCAAAACACTCA
AACTTACTCCAAACGCTGGTTTTGATTCAAAAGCATCCGGAACAGCAAAT
GAATATTATGATACACAAAGTGCACGCTTTGTTTGCCCGGTTGTAGGTTA
GAACTTTAATTCTGTTAAATCTTTACGAAGTTTCTATTTATAAGATGAAT
TTTCAGACAAAAGCtttttttGCGTTGTTTtaggaaataaaaaatccaCT
GCTAAAAAATTAGCtggcttttttttcaaatagcaAATTTCTGAAAGGCT
GAAAGAGCAACAATAGGTTAATTTAATTCATCTTTAAAGATGAGAATGGA
TCAGATTTTTATTCCATCAAGtcagatttgttttttttgataTTCTGACA
CAAAAATGTTTCTGTAAAATTTCCTTACTAATACGTAATAGTAGCACTCA
TTGGAAGATCTAGTCTAGTAGTTTTCAAAGAACAAGCACAGTTATTACAA
TGTAGCTATACTGATTAATAACAATAGCCAGCTATTCTTTTCATTACAGG
CATTGAAATGAATGGAAAGTACAAGTTTTACACATTGTGGAGCTGTGGCT
GTGTTCTTTCTGAAAGAGCATTCAAGGAGGTAGAATCTGAAACTTGCCAT
AACTGCGgagaaaaatttgataaagatgATGTCATTGTTTTGAATGCAGA
GGGtgaagatttggaaaaaatggaaacaaatatgaaggagagacgagaga
aaatgaaaaaggcaaaaaagctaaagaaagaaaagagtaatgagaaaagg
aaagcagaaaaTGGTGTACATGAGTTTGCTGTCCCACAGAAGCTGAGTAA
TGCTAAAACTGATGATAAACAACGTCCTGCCAAAAAGCCTAAATTATCAT
CTGAAGTTACTGATACAAAATCTAAAATCAATGGTAGCGGCAAAGATGTT
CCAGCCAAAAAGGCTAAAAGTTCCAAATCCAAGGAAGATAAAGTTGATAT
CAAGCAATCGAAAGTTTACAAGAACTTATTCACCTCTAGTGAAAAGAAGA
ATGGTAAAGATAATCAGGCCCATTGGGTTACATACAATCCCTATCATTTG
TAA Coding sequence (CDS) from alignment at sc0000059_pilon:225775..230977+ >XLOC_037403 ID=XLOC_037403|Name=XLOC_037403|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1824bp|location=Sequence derived from alignment at sc0000059_pilon:225775..230977+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTGTGATGGAGGAACAATCCCAAAAAGACATGAACTCGTCAAAAC
GGCAAAGCGACCTGAACAGAAGGATAAAGACATGGATAGAAAAGCAAAAT
GGTCTACTTGTACAATCAGCCAACAACCATTATCAAGTCCTGTTGTTGCT
TGCGAACTAGGGAAGCTTTACAGATGGGTTGTGATGGAGGAACAATCCCA
AAAAGACATGAACTCGTCAAAACGGCAAAGCGACCTGAACAGAAGGATAA
AGACATGGATAGAAAAGCAAAATGGTCTACTTGTACAATCAGCCAACAAC
CATTATCAAGTCCTGTTGTTGCTTGCGAACTAGGGAAGCTTTACAGCAAA
GAATCCAttatagaatttcttttggatcGATCAATATGTGAAACAGCAAA
CCACATCAGGAATTTGAAAGATGTCAAAACACTCAAACTTACTCCAAACG
CTGGTTTTGATTCAAAAGCATCCGGAACAGCAAATGAATATTATGATACA
CAAAGTGCACGCTTTGTTTGCCCGGTTGTAGCAAAGAATCCAttatagaa
tttcttttggatcGATCAATATGTGAAACAGCAAACCACATCAGGAATTT
GAAAGATGTCAAAACACTCAAACTTACTCCAAACGCTGGTTTTGATTCAA
AAGCATCCGGAACAGCAAATGAATATTATGATACACAAAGTGCACGCTTT
GTTTGCCCGGTTGTAGGCATTGAAATGAATGGAAAGTACAAGTTTTACAC
ATTGTGGAGCTGTGGCTGTGTTCTTTCTGAAAGAGCATTCAAGGAGGTAG
AATCTGAAACTTGCCATAACTGCGgagaaaaatttgataaagatgATGTC
ATTGTTTTGAATGCAGAGGGtgaagatttggaaaaaatggaaacaaatat
gaaggagagacgagagaaaatgaaaaaggcaaaaaagctaaagaaagaaa
agagtaatgagaaaaggaaagcagaaaaTGGTGTACATGAGTTTGCTGTC
CCACAGAAGCTGAGTAATGCTAAAACTGATGATAAACAACGTCCTGCCAA
AAAGCCTAAATTATCATCTGAAGTTACTGATACAAAATCTAAAATCAATG
GTAGCGGCAAAGATGTTCCAGCCAAAAAGGCTAAAAGTTCCAAATCCAAG
GAAGATAAAGTTGATATCAAGCAATCGAAAGTTTACAAGAACTTATTCAC
CTCTAGTGAAAAGAAGAATGGTAAAGATAATCAGGCCCATTGGGTTACAT
ACAATCCCTATCATTTGTAAGCATTGAAATGAATGGAAAGTACAAGTTTT
ACACATTGTGGAGCTGTGGCTGTGTTCTTTCTGAAAGAGCATTCAAGGAG
GTAGAATCTGAAACTTGCCATAACTGCGgagaaaaatttgataaagatgA
TGTCATTGTTTTGAATGCAGAGGGtgaagatttggaaaaaatggaaacaa
atatgaaggagagacgagagaaaatgaaaaaggcaaaaaagctaaagaaa
gaaaagagtaatgagaaaaggaaagcagaaaaTGGTGTACATGAGTTTGC
TGTCCCACAGAAGCTGAGTAATGCTAAAACTGATGATAAACAACGTCCTG
CCAAAAAGCCTAAATTATCATCTGAAGTTACTGATACAAAATCTAAAATC
AATGGTAGCGGCAAAGATGTTCCAGCCAAAAAGGCTAAAAGTTCCAAATC
CAAGGAAGATAAAGTTGATATCAAGCAATCGAAAGTTTACAAGAACTTAT
TCACCTCTAGTGAAAAGAAGAATGGTAAAGATAATCAGGCCCATTGGGTT
ACATACAATCCCTATCATTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:225775..230977 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 361-912:4652 |
| Aaloc | 175-357:4063 |
| Aaloc | 1-171:1 |
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