XLOC_037380 (mRNA) -

Overview
NameXLOC_037380
Unique NameXLOC_037380
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000064_pilon:681101..682216+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037380 ID=XLOC_037380|Name=XLOC_037380|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1116bp|location=Sequence derived from alignment at sc0000064_pilon:681101..682216+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGGTGACATTATCATTTGTTTTGCTTTGCATTATTTCACCATGCGA TGGCAGCAAAGATCTGTTGAATTTGTCGAATGATACACAACAAATGCTAA GCTGTCTTCAACAAAGGAATATCACAGTGTTTGCTCATTATGCATTACCA AGatattttgataaactttttgagcttttcaaGTCTGAATTTGTCGATAA TGAATTTTGTTACATTGTTAATTTTTATCTCCGAGACGAGGACCGTATCA TCAGACTGACAAAAGAAGCAAAcaaaaatgttattgaaaaatattcttca tcgAAATATCATTATACAGCCCACTTGAGAATGAAAAAACTGATGAATCA GATTTACGAGGATACCATTATGTTTGGGAAAGACTTTTTCGCGACAAAac aaacttttgtttttatttttgacgaATATTTCCCCTACGTTCATATTCTG CTACCATACATAGAAAAACTCCGAGAAACCGGTATTTTTGAGGTTATCAT ATACGGAGATGCTTCCCGCTACGAGTCAATTGCAAATCTGAAAATACCGC TCCACAACCTCTTCTTAACAGGAACACCAGATTTTACGGAGCTATCGCTA AAAAATCTAATAGATGTCATTAAAAATACTGATTTCAATCGATATAATTT CTACCGCTCAATACAtttccaaaaagattttttaaaccatACTTGTTTAA ACGGTATTGGAACAATCCACATCAAGATAGCATCGATAGATGATCTGTAT TTACCAATGGCTCTGGCGATTTTGCACAAGGAGAATGAACATCGAAAGAG AATGGGGAATTTCAAATTCATGAAAATCATATTCTATTCATTATATGAAG TACCAGATTTAGTGAATTTTATTGATGATAATTTGAAAGTATTTTCCATA CATCGTTTTCCAGAATGGCAACGaggaatgaaaaatatatttctttcaaT TCTCGATAACAGTTTATATAATACTAATATTGTGGCCTTTGAAGATGAAT ATGTTTACCGCATCCCATCCGTTCAACCTCcagaaacatatcaaaatctA AAATGGGTACTTTTTGAAAGTGCAGATGAATTTTATTACAAATTGAACGC AGATATTTGCAATTAA

Coding sequence (CDS) from alignment at sc0000064_pilon:681101..682216+

>XLOC_037380 ID=XLOC_037380|Name=XLOC_037380|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2232bp|location=Sequence derived from alignment at sc0000064_pilon:681101..682216+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGGTGACATTATCATTTGTTTTGCTTTGCATTATTTCACCATGCGA
TGGCAGCAAAGATCTGTTGAATTTGTCGAATGATACACAACAAATGCTAA
GCTGTCTTCAACAAAGGAATATCACAGTGTTTGCTCATTATGCATTACCA
AGatattttgataaactttttgagcttttcaaGTCTGAATTTGTCGATAA
TGAATTTTGTTACATTGTTAATTTTTATCTCCGAGACGAGGACCGTATCA
TCAGACTGACAAAAGAAGCAAAcaaaaatgttattgaaaaatattcttca
tcgAAATATCATTATACAGCCCACTTGAGAATGAAAAAACTGATGAATCA
GATTTACGAGGATACCATTATGTTTGGGAAAGACTTTTTCGCGACAAAac
aaacttttgtttttatttttgacgaATATTTCCCCTACGTTCATATTCTG
CTACCATACATAGAAAAACTCCGAGAAACCGGTATTTTTGAGGTTATCAT
ATACGGAGATGCTTCCCGCTACGAGTCAATTGCAAATCTGAAAATACCGC
TCCACAACCTCTTCTTAACAGGAACACCAGATTTTACGGAGCTATCGCTA
AAAAATCTAATAGATGTCATTAAAAATACTGATTTCAATCGATATAATTT
CTACCGCTCAATACAtttccaaaaagattttttaaaccatACTTGTTTAA
ACGGTATTGGAACAATCCACATCAAGATAGCATCGATAGATGATCTGTAT
TTACCAATGGCTCTGGCGATTTTGCACAAGGAGAATGAACATCGAAAGAG
AATGGGGAATTTCAAATTCATGAAAATCATATTCTATTCATTATATGAAG
TACCAGATTTAGTGAATTTTATTGATGATAATTTGAAAGTATTTTCCATA
CATCGTTTTCCAGAATGGCAACGaggaatgaaaaatatatttctttcaaT
TCTCGATAACAGTTTATATAATACTAATATTGTGGCCTTTGAAGATGAAT
ATGTTTACCGCATCCCATCCGTTCAACCTCcagaaacatatcaaaatctA
AAATGGGTACTTTTTGAAAGTGCAGATGAATTTTATTACAAATTGAACGC
AGATATTTGCAATTAAATGCTGGTGACATTATCATTTGTTTTGCTTTGCA
TTATTTCACCATGCGATGGCAGCAAAGATCTGTTGAATTTGTCGAATGAT
ACACAACAAATGCTAAGCTGTCTTCAACAAAGGAATATCACAGTGTTTGC
TCATTATGCATTACCAAGatattttgataaactttttgagcttttcaaGT
CTGAATTTGTCGATAATGAATTTTGTTACATTGTTAATTTTTATCTCCGA
GACGAGGACCGTATCATCAGACTGACAAAAGAAGCAAAcaaaaatgttat
tgaaaaatattcttcatcgAAATATCATTATACAGCCCACTTGAGAATGA
AAAAACTGATGAATCAGATTTACGAGGATACCATTATGTTTGGGAAAGAC
TTTTTCGCGACAAAacaaacttttgtttttatttttgacgaATATTTCCC
CTACGTTCATATTCTGCTACCATACATAGAAAAACTCCGAGAAACCGGTA
TTTTTGAGGTTATCATATACGGAGATGCTTCCCGCTACGAGTCAATTGCA
AATCTGAAAATACCGCTCCACAACCTCTTCTTAACAGGAACACCAGATTT
TACGGAGCTATCGCTAAAAAATCTAATAGATGTCATTAAAAATACTGATT
TCAATCGATATAATTTCTACCGCTCAATACAtttccaaaaagatttttta
aaccatACTTGTTTAAACGGTATTGGAACAATCCACATCAAGATAGCATC
GATAGATGATCTGTATTTACCAATGGCTCTGGCGATTTTGCACAAGGAGA
ATGAACATCGAAAGAGAATGGGGAATTTCAAATTCATGAAAATCATATTC
TATTCATTATATGAAGTACCAGATTTAGTGAATTTTATTGATGATAATTT
GAAAGTATTTTCCATACATCGTTTTCCAGAATGGCAACGaggaatgaaaa
atatatttctttcaaTTCTCGATAACAGTTTATATAATACTAATATTGTG
GCCTTTGAAGATGAATATGTTTACCGCATCCCATCCGTTCAACCTCcaga
aacatatcaaaatctAAAATGGGTACTTTTTGAAAGTGCAGATGAATTTT
ATTACAAATTGAACGCAGATATTTGCAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_037380XLOC_037380-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000064_pilongenomesc0000064_pilon:681101..682216 +
Properties
Property NameValue
Aaloc1-1116:1