XLOC_037347 (mRNA) -

Overview
NameXLOC_037347
Unique NameXLOC_037347
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000018_pilon:2623402..2624637-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037347 ID=XLOC_037347|Name=XLOC_037347|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1236bp|location=Sequence derived from alignment at sc0000018_pilon:2623402..2624637- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTGTCCATCGTGTGGTGCGCAAAGGGAAGTTGAATATAGATTCTG TGGAAATTGTGGAGATCAATTTATTGTTCCAAACCCAAATGAAGGGGAAA ATATTGAGGAATCTCTGATAAAAAAGTATTTTCACGATGGTCACACATAT TCGGCCATTGTCTGTTTACTTGAAAATTACGGTGTCAATCTTGGTGTCAG GACACTTAAAAGAAGACTCGTACTGTATGGGCTTGATAAGAGCCAGAATG TAGACGATGCAACATTGAGTGGAATCATGCAAACGGAACTCCAAGGACCT GCCTCTAATCTTGGATATAGGAATATGTGGAACCTTTTAAGGACAAAGTA TAACATCAGATGTCCTCGTGATAAAGTAATGAACCTTTTACAAGAACTGG ATCCTGAAGGGGTGGTTCAGCGAAGATCCAGAGTTTTGAGACGAAGAAGG TACACTTCAAGAGGACCAAATGACACTTGGCATATTGATGGATACGATAA ACTTAAACCGTACGGTCTACCGATTCATGGAGCAATCGATGGCTTTTCGA GAAAAATATTGTGGCTCAAAGTTTGCAAAAGCAATAACGACCCTTGTGTC CCTGCAGCTTACTATCTTGATACTATCAAAGACGTTAATATGATTCCAAA ACTTTTGCGCACAGATTTAGGCACAGAAAACGGACTTGCTGCTGCTATTC AATGTACACTTCATAATACCATTGGTGCACATAGGTATGGTACATCAGTA TCCAATCAAAGGATAGAAAGTTGGTGGTCATCCCTTAGAAAGTCCTACAG TGGATGGGTGATTGACTTCTTCAAAAGAAAAATTGATGACGGCACTTTTG TGACTGGGAGTAAGTTATACGAGGAAGTTTGTTGGTTTTCGTTTTCCCCC TTAATTCAAAAAGATCTTGACCACATTGTAAAGAATTGGAACACACATCG CATAAGGTCATCTGGAGAGAACGTTATTGGTGGTGTACCTAACGAATTAT ACAACATTCCAAATTCTTTCGGTTATGTAGAATGTGGTCAGGTGACAAGA GAGCATGATTTAAATCGGATTGACCAAATAGATGAAATATTTGATAGCTT TCAACTCAAAAACTCAATGGACGATGACATAAAGGATTATTGTGAGCACG TGGTAGCTTCTAGGAACATTCCATGGCCACCGAGTAATTGGACGAATGCT GAATTTTTATTTGACGCTATCATAGCTTGCTCTTAA

Coding sequence (CDS) from alignment at sc0000018_pilon:2623402..2624637-

>XLOC_037347 ID=XLOC_037347|Name=XLOC_037347|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2472bp|location=Sequence derived from alignment at sc0000018_pilon:2623402..2624637- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTGTCCATCGTGTGGTGCGCAAAGGGAAGTTGAATATAGATTCTG
TGGAAATTGTGGAGATCAATTTATTGTTCCAAACCCAAATGAAGGGGAAA
ATATTGAGGAATCTCTGATAAAAAAGTATTTTCACGATGGTCACACATAT
TCGGCCATTGTCTGTTTACTTGAAAATTACGGTGTCAATCTTGGTGTCAG
GACACTTAAAAGAAGACTCGTACTGTATGGGCTTGATAAGAGCCAGAATG
TAGACGATGCAACATTGAGTGGAATCATGCAAACGGAACTCCAAGGACCT
GCCTCTAATCTTGGATATAGGAATATGTGGAACCTTTTAAGGACAAAGTA
TAACATCAGATGTCCTCGTGATAAAGTAATGAACCTTTTACAAGAACTGG
ATCCTGAAGGGGTGGTTCAGCGAAGATCCAGAGTTTTGAGACGAAGAAGG
TACACTTCAAGAGGACCAAATGACACTTGGCATATTGATGGATACGATAA
ACTTAAACCGTACGGTCTACCGATTCATGGAGCAATCGATGGCTTTTCGA
GAAAAATATTGTGGCTCAAAGTTTGCAAAAGCAATAACGACCCTTGTGTC
CCTGCAGCTTACTATCTTGATACTATCAAAGACGTTAATATGATTCCAAA
ACTTTTGCGCACAGATTTAGGCACAGAAAACGGACTTGCTGCTGCTATTC
AATGTACACTTCATAATACCATTGGTGCACATAGGTATGGTACATCAGTA
TCCAATCAAAGGATAGAAAGTTGGTGGTCATCCCTTAGAAAGTCCTACAG
TGGATGGGTGATTGACTTCTTCAAAAGAAAAATTGATGACGGCACTTTTG
TGACTGGGAGTAAGTTATACGAGGAAGTTTGTTGGTTTTCGTTTTCCCCC
TTAATTCAAAAAGATCTTGACCACATTGTAAAGAATTGGAACACACATCG
CATAAGGTCATCTGGAGAGAACGTTATTGGTGGTGTACCTAACGAATTAT
ACAACATTCCAAATTCTTTCGGTTATGTAGAATGTGGTCAGGTGACAAGA
GAGCATGATTTAAATCGGATTGACCAAATAGATGAAATATTTGATAGCTT
TCAACTCAAAAACTCAATGGACGATGACATAAAGGATTATTGTGAGCACG
TGGTAGCTTCTAGGAACATTCCATGGCCACCGAGTAATTGGACGAATGCT
GAATTTTTATTTGACGCTATCATAGCTTGCTCTTAAATGTTTTGTCCATC
GTGTGGTGCGCAAAGGGAAGTTGAATATAGATTCTGTGGAAATTGTGGAG
ATCAATTTATTGTTCCAAACCCAAATGAAGGGGAAAATATTGAGGAATCT
CTGATAAAAAAGTATTTTCACGATGGTCACACATATTCGGCCATTGTCTG
TTTACTTGAAAATTACGGTGTCAATCTTGGTGTCAGGACACTTAAAAGAA
GACTCGTACTGTATGGGCTTGATAAGAGCCAGAATGTAGACGATGCAACA
TTGAGTGGAATCATGCAAACGGAACTCCAAGGACCTGCCTCTAATCTTGG
ATATAGGAATATGTGGAACCTTTTAAGGACAAAGTATAACATCAGATGTC
CTCGTGATAAAGTAATGAACCTTTTACAAGAACTGGATCCTGAAGGGGTG
GTTCAGCGAAGATCCAGAGTTTTGAGACGAAGAAGGTACACTTCAAGAGG
ACCAAATGACACTTGGCATATTGATGGATACGATAAACTTAAACCGTACG
GTCTACCGATTCATGGAGCAATCGATGGCTTTTCGAGAAAAATATTGTGG
CTCAAAGTTTGCAAAAGCAATAACGACCCTTGTGTCCCTGCAGCTTACTA
TCTTGATACTATCAAAGACGTTAATATGATTCCAAAACTTTTGCGCACAG
ATTTAGGCACAGAAAACGGACTTGCTGCTGCTATTCAATGTACACTTCAT
AATACCATTGGTGCACATAGGTATGGTACATCAGTATCCAATCAAAGGAT
AGAAAGTTGGTGGTCATCCCTTAGAAAGTCCTACAGTGGATGGGTGATTG
ACTTCTTCAAAAGAAAAATTGATGACGGCACTTTTGTGACTGGGAGTAAG
TTATACGAGGAAGTTTGTTGGTTTTCGTTTTCCCCCTTAATTCAAAAAGA
TCTTGACCACATTGTAAAGAATTGGAACACACATCGCATAAGGTCATCTG
GAGAGAACGTTATTGGTGGTGTACCTAACGAATTATACAACATTCCAAAT
TCTTTCGGTTATGTAGAATGTGGTCAGGTGACAAGAGAGCATGATTTAAA
TCGGATTGACCAAATAGATGAAATATTTGATAGCTTTCAACTCAAAAACT
CAATGGACGATGACATAAAGGATTATTGTGAGCACGTGGTAGCTTCTAGG
AACATTCCATGGCCACCGAGTAATTGGACGAATGCTGAATTTTTATTTGA
CGCTATCATAGCTTGCTCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_037347XLOC_037347-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018_pilongenomesc0000018_pilon:2623402..2624637 -
Properties
Property NameValue
Aaloc1-1236:1237