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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000223_pilon:323013..329653+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037311 ID=XLOC_037311|Name=XLOC_037311|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6641bp|location=Sequence derived from alignment at sc0000223_pilon:323013..329653+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAAAACAAAGATGTTCTGTCTATAAACTCTGATAGCTCAAGTCC
AACGTCCAATGCAGAATTTATAATGGTTGATGATAATATAAGTAATGCTT
CAACTgccaccaaaataagtttctCAGATACACAAAGTGATGATTTTATG
CCAAAAATGGGTGATATGGATCATGGCCAAGATGTCAGTCAACTAGTTGC
TGAAGCCCAGATGGATCTAATTTCAGATTACTATACATCGAATAAAGACC
AGCTTAATGATATTGAGGAGGATTTTgggtcaaaaaaagaaatgatgAGA
GCTGTTTCACCGCAATCTTCTGACGAAGAAAGACATATGAGTGGAAATGA
TGATGATAAGGATGCTTGCATAATGTTTCACGGGATTACATACCTTGGAT
CTTCTAATATAGATGCACCTAAAAGTGACTTAGAACTTGAAAGAGCAATA
TCTATATTAAGAGATCATGTTGAAGAATGCATTGACGTTATTTTATCTGT
ATCGGTCAATCCACTGGGGCAAATTCAACTTATTGATCCACAATCAAGAA
CTGAGATAGCGACTTACGATATCAGTAATATATGTTATTGGGGAAAGGGG
AAGAGTAATAGTGTAGAGAAAGATTGCTTGGCTTTTAATATCAGCCATGG
GAAAGAAGATGTGACTTATCATTGCCATGTATTCAAATGCAATGAAGATG
ACGtaagataaacattttttattgatgatatgcaccactggagtcttctg
agaacttttaaaattttccacccaatacgtcacttaaaaaatagaaaaag
tgaagtAATGAATTGCATATTGGAAGACTCTCCATATCATGATGAATTCA
TCTTTTTTCTTCTACTGACCAAATTTTCTAAGTTGTTTTGCTCCAAGGTC
AGAATTTttatttagaggttgttcggaAATCTTGCAAGCCTGGAAACAGA
GTTGAACAATAACTCCTGAATTCTGGGAGCTTAGACCTTAAATAAATGAA
ATCTGACTTCGtttttttCTTGTCCTTTACACTGTTCACattaagttttt
ctttaaactaCAGGTGAAAAGAATTTTGCAATCACTTGCACAGACGATAA
AGAAAGATCAAAAGGTAAAAGATTTGCTGTAAGAATTAGAATGCTTCTCC
ACAGCTAGATTTTATTGGATTAGAAAAAACGAAGGACTAAggattgacat
ttttttttctttgttattctCTGGTATTGAGGAATTTAAAGATAATATTT
AAaagcaaattcaaaaaaatcagaGTTCTTTATTATAGAGGAAACAAAAT
GAGTTCCCATCCAACCGACGTGGCTCTAAATTTGATTTAAATGATTTGAG
TTTCAAATTCAACATTATTCTTGACGTCTGGGAGGAGGATGGTAAAGGCT
CATTTCAAACAGTTGCTCGTGACAAAACACATTTCAAGCTGAGAAAAGAT
TTGCAAAGAAAATTGGTTTTTGTTATTGAGCAAACTTCTAATTgcaaact
gaaaattgaaaggTACAAGTATGCCTGTTCTgactaaaaaagggaaatta
ATAAACTAGATGGTTTTGATCTAGTATTTAAAAGAACTCTTGTTTTAATC
TTGTATGATACTGCTTTAAAAGCTGTCTTGGAGTcgttgaaatgaaattt
ttctttaactttttgtatttttttcactgCACTTATATATTATGTAAGGA
TGAGACTTGGTTCCGAAACTTCctatattttctcttttctacATATAAAT
AATTTCTAACCttcaattattttgatttcacTTTAGATGTTTTGGCCTCT
TACTGGCACAAGGAAGGGATATTCCAGAAGGGGATTTTCATTTACTTCAA
CAGGTGAGAGACAAACTTTTGATCAGCAAtctctttttaacttttaagac
ATGATTTTGTCTGAAGATTAAAAAACAATGTTTTCTTCCAAGATCTTCGC
TATTCCTCCCACTGTCCTTGATGTGGTCATGTGTTAAAcactaaattttt
aattttattactttttgcagcattttcttgatctattattatcttcattt
ttcagattGACACAGACACACAGATACCTGGGAAAACCATCATACATGCA
CACTGGGATTCAACACTAGATTATTGGAAAGTTTTGAACACAGATCCTGG
AAAAGGTACACaatctttgttctttttttcaaagcaaaagatGAAGAACA
tggatgttttgttttgatttattagGCAGTGAATTACAAATTAACTGgat
gaattgggctttttcagaaaaaagttttacccccactgttgaggatattg
atttttcgaaccccctggatatcctctcttataaagatgcttacccctgg
atatcgtattttttacttgaaaagacagtTAACCTCCTGGATAtgcgctc
ccttgtagatatttgaCCCCcaggatatccacttttgaacaaaaatcgtt
aaccccctggatatcctcaacagagaggggcacagactatttctgggAAA
GCCCATTCTGGTCTATGAATTCTTTATCATATTGATAACCTTGAATATGT
CCTAGGACAGGCGAATGAAATATTACACTGGTGAGATACTTTTACTGTCT
TTGGTTGGTGAAATTGGTCTATAGAAGGACCTTGTAGTATTAAGCTGTGT
TAAAGAGCCATTAATTTTGTCATTGCTTTCGCCTTCGTTGAAAACACGAG
CTCTAATCTTCTTCTGTTATATTTTGCTCCTTTTGTTGAACCTTGAAAAG
CTTCTGCAGCTTGTGTGAGGAATTTCTATTGAtaagctaagtaaagttca
gctaaagtaaagtatgagaaaaaatctgaaaaagacctaaaagtGAATTG
ATAAGCCATTTAAACCAGATCAGGTTGAATTTTATCAATTCATTTTTAGT
TCATTACTTTAGTTGAACTTGACAGGGTTGCCCTTGGCTTGTAACAATTT
TTTCATTCACTTTTGACAAGAGTAATTTTTATCACGGTTAAGTTTTTCGt
tcatggaaaaaaattgtcaaacttgtttctttttatattcTGGTCAAAGG
GTCAAAGGTTTCtcatgaaaattgattttgatcaaGAAGTTTATACGAGA
TAACATATCTAAGACTTACGAAATGCAAAGGTGCTGTAACTGATTTGACA
ACTGAATTTAGTAAAAtgtgatttctttttatcaCATTTTTAGATAATAG
AGTTTACATGACGGTGGCAGCAGACGTTGTTTTCAAAGACCTTAAAGAGC
CTGTTCGTTTTGTCAAGGAAGCCAAAGTGCGTGTTTTCCCTTCCAACGAG
AAGTTTTGGAACCCATCCAAACCGAGAATCCAAGAAGACTTTGTCCTTGA
ATTGAAAGAGGTGAGAACTTTCCTCCAGAATATATTTAATATCCTTTCTG
TATCATCTAGCGTAGGTGAAAATCAAGAAAGGTTTAACCGTTTCTAGTTT
TTACAGCAGAAACAAAAGCAATCCTTTTTAATCCGGTGATTTTTCAAAGC
CTTTTGTAGCCCAGTGCAACCCTTATTTACTCCTTTACTGCCTTTATTTT
GGCCATAGCTCTGAAGCTGTATCCATATCCTGATCTGTTTGATCAGATAC
ATTTTGGCTGAATACAATTATAAGTTAACTTAATTACAGTCTAGCTAAGT
TTACAGTTATTGCATTGACAATAATAGTAGAAATTGTTAGAGATACAGAC
CTTTGAACTTAACAGGtgactttgtttttaaaatacgTGTCTAAACAAAC
ATTTCACCACCGTTTTTATTTGGGGTTTTCtcgatttgatgacgtcacta
ctGGTGCTTGCATGATTTTAGAGCATGTATCAAAAAGCGTGtcatatcta
atttttttttgtcataagtCTTTAACTATTTAAAAAGTAAACATGTCTTC
AGAGCTGGTCACTTGCCTCATACATTTAGGAttggaatttttaaactttc
ataATCGTTACGGGAGAAATGCGTAGCTTGGGATTAGTTTATCTTTTTCT
GTAAATCTGCGATTGCTTAAAAAGATTATGTGGGTTTCACTCATAATatc
aatataaaatatatatttttaacagCTCCTCCTTTATACATATTCAatat
aaattttcaagtttatccAAATATTTTTGCAGTTTCTCTTAGTTCCTTAA
GATTTTCAGTTGAACTTGAAAGAAGGCACATTCCATGGGAGTGGATTCAT
CTTTTCTCTATGTATCATGTTTCCTTTATCCTCTTATCCTACTCTCCTAC
TCTCTAAATACAAATAAAGAAATTGACACAACAATAAAACCACATCTGAT
CACATACCACATGAAATAAATATGATGTATAAAGAAATCTGACATGTCAA
ACGTATTACTATGTAAACAAATCGGTTAAACTTTACACtgtgataaaaaa
aagtatataaatcCAATGCTAGATTGATCTTGCCAAAAGAATCATAATCA
TCAGCTATTCAGTGCACTAGATAGATACACGTTACATTATACTATATTTT
GTAcgtgaaaataataaaacatgGTTTATAAACGAAAGTTACATGATCAA
TGGACCAGACGTTCCCGTAGGAAATCTTCATTGAAAGATTTGGTAGGttt
tttttCCATTCCAACTTTAACATCACATGAGGTTTTGGTATCgaatttgc
caaaattgaatgaaattaaaatgtcTGTCAATGCTATCATATcagaattt
ttatattttcgatTCTGTTAAACTCGAACcaaatttcgtttttgttggAG
CTTTTGAAATGTCCCCTTTTGGATAGTTCAAAGCCTCCTATCATAAATGA
CTACGGTATGGCAGAATAACTAAGTTAGAAAAAACTGGTTTAGAGAATAA
CATCGCCTActtttttggcttactttttcggcttactttttCAATAATCT
TCAGGTAAAATTTTGACTACGTTACTTTAAACATGAAGGCATAAACGAGT
TTATTTAGTGTATCTGGGCTTTCCTGCGACGGAAACGGTTAGCTTCTGAT
ATTTCTAGATCCTGATTgtctgaggacgacggtaaattgGCACTTTTGCC
GTTCCAGGGAACTTCTCGGAGTTCAAAGTTTCTCACCAATAACCTCTTAT
TTTGAGTCATCTTTGATCACTTAATGCGATTTTCGGTATCAGCAGTGGTT
TTCTCATCAACCACTCTTAAGATTGTGAAGAGATCGAACATCAGATAACC
ATTTTTTAGTCAGTGTCTAAAACATTCTATAAACCATAATAAAATCGCTT
GAAAGTGAAAGAAACGTTCAGATACTGGCTAGTTTAAAACTTCGTCAGTC
gtttataatttcaaatttcagatGATTACAACCCAAGAAAACGTCACGAT
TCTTACACAcaatcttttaaagaaaaacctcaaaaataaaaaaaaattca
aataacaaGAAAGTTGTGAGACCACAACgtttaaaatttcaaacgaCATT
TATTCGAACGACAAGAAATTATTCAAcaaaattcttagaaaatatTATGT
TTTATGAAAGTGTCTTGTAGTATAGTTTAAATCGttcagaaaaatctttt
tcctcTGAATGAGCCATGGATACCTACTGAAAACTCTACAAACAAGATGA
ATACCATAGCCATGAGGAAATCTTTTTATTTCCTTCCGTCCTCAATGTTT
TGACTTGGTTTCGACTCTTAAAGTTATGCTATCCTCTGAAGTTGTTCAAA
GACGTAAAAAAGACCATTGgccaaagaagaaaaaggaCGTGACAAGAACT
TTCAGTTTGAATTTGGTATATACATACAAATTAGATTATTTACTCGGGAT
ACTGATAGATAATTTGTTCTGACTGCTAGTACAAAAAGCGAACAGCTAAA
GTAATATCATATTAATTCACTAGTTTTGTATACGCAATCATTGCTAAAAT
GCAAGTATCATGGTACGTGTAGAAAATGTCTGCAGAAGCTTTTATAGGTT
TCAATGAACAACCTAAAAGTTCACAATGAGAGACGTAAagtagcttgttt
tttttccgTATTGTGATTTACTCTTTGGTTTCGTGGATTGCAAAAGTTCT
TTTCCATGGCGCCTTTTCTCAGGTGGACTTTAGTtatcaaaattaagttt
gcagTCTTAAGTTTAAAGGCCATCATTCAACGTATACCCCACGGTATATC
CTACTATTTGCTTACAAGAACAGCCCTGGGAGCCCGTGCTGTGGCAgcgt
aaattttgaaaatttcttttataaaaaaaaagtgtctttaTAAGGTTGGT
GCAAATGCGAATATTCCATTCAACATTTCAAAGTTCATTAATGGACAAAT
GTTGGATGGCAAACGCAACAAACGGCATTGAACACTTTAATTAGAATAAC
CACATGTATACAACATAAAATGCTGTGTCGGCAAAATTTTGGAGTCATTT
GCGCTAGCTTTTATATGAAGGAGTATGAAAAATATAGTTGTAATGTCTCA
CCATCCATATCATTTCTCTACCATAGAACTTCAACGATGAAGGTGAAAAA
TGGTTGGAGAAGGAGAGCTTACATAGTGCAGTGGAAGTTCAAAAGTTGAA
GAATTCAAGTGGTTCTCTCTCTTCTATATGGAAAAACAATACCAATAAAC
CGAAACTGAGACAAGACAGTACAATCTCTGTGGAACCAGAA Coding sequence (CDS) from alignment at sc0000223_pilon:323013..329653+ >XLOC_037311 ID=XLOC_037311|Name=XLOC_037311|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2952bp|location=Sequence derived from alignment at sc0000223_pilon:323013..329653+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAAAACAAAGATGTTCTGTCTATAAACTCTGATAGCTCAAGTCC
AACGTCCAATGCAGAATTTATAATGGTTGATGATAATATAAGTAATGCTT
CAACTgccaccaaaataagtttctCAGATACACAAAGTGATGATTTTATG
CCAAAAATGGGTGATATGGATCATGGCCAAGATGTCAGTCAACTAGTTGC
TGAAGCCCAGATGGATCTAATTTCAGATTACTATACATCGAATAAAGACC
AGCTTAATGATATTGAGGAGGATTTTgggtcaaaaaaagaaatgatgAGA
GCTGTTTCACCGCAATCTTCTGACGAAGAAAGACATATGAGTGGAAATGA
TGATGATAAGGATGCTTGCATAATGTTTCACGGGATTACATACCTTGGAT
CTTCTAATATAGATGCACCTAAAAGTGACTTAGAACTTGAAAGAGCAATA
TCTATATTAAGAGATCATGTTGAAGAATGCATTGACGTTATTTTATCTGT
ATCGGTCAATCCACTGGGGCAAATTCAACTTATTGATCCACAATCAAGAA
CTGAGATAGCGACTTACGATATCAGTAATATATGTTATTGGGGAAAGGGG
AAGAGTAATAGTGTAGAGAAAGATTGCTTGGCTTTTAATATCAGCCATGG
GAAAGAAGATGTGACTTATCATTGCCATGTATTCAAATGCAATGAAGATG
ACATGGATGAAAACAAAGATGTTCTGTCTATAAACTCTGATAGCTCAAGT
CCAACGTCCAATGCAGAATTTATAATGGTTGATGATAATATAAGTAATGC
TTCAACTgccaccaaaataagtttctCAGATACACAAAGTGATGATTTTA
TGCCAAAAATGGGTGATATGGATCATGGCCAAGATGTCAGTCAACTAGTT
GCTGAAGCCCAGATGGATCTAATTTCAGATTACTATACATCGAATAAAGA
CCAGCTTAATGATATTGAGGAGGATTTTgggtcaaaaaaagaaatgatgA
GAGCTGTTTCACCGCAATCTTCTGACGAAGAAAGACATATGAGTGGAAAT
GATGATGATAAGGATGCTTGCATAATGTTTCACGGGATTACATACCTTGG
ATCTTCTAATATAGATGCACCTAAAAGTGACTTAGAACTTGAAAGAGCAA
TATCTATATTAAGAGATCATGTTGAAGAATGCATTGACGTTATTTTATCT
GTATCGGTCAATCCACTGGGGCAAATTCAACTTATTGATCCACAATCAAG
AACTGAGATAGCGACTTACGATATCAGTAATATATGTTATTGGGGAAAGG
GGAAGAGTAATAGTGTAGAGAAAGATTGCTTGGCTTTTAATATCAGCCAT
GGGAAAGAAGATGTGACTTATCATTGCCATGTATTCAAATGCAATGAAGA
TGACGTGAAAAGAATTTTGCAATCACTTGCACAGACGATAAAGAAAGATC
AAAAGGTGAAAAGAATTTTGCAATCACTTGCACAGACGATAAAGAAAGAT
CAAAAGAGGAAACAAAATGAGTTCCCATCCAACCGACGTGGCTCTAAATT
TGATTTAAATGATTTGAGTTTCAAATTCAACATTATTCTTGACGTCTGGG
AGGAGGATGGTAAAGGCTCATTTCAAACAGTTGCTCGTGACAAAACACAT
TTCAAGCTGAGAAAAGATTTGCAAAGAAAATTGGTTTTTGTTATTGAGCA
AACTTCTAATTgcaaactgaaaattgaaagAGGAAACAAAATGAGTTCCC
ATCCAACCGACGTGGCTCTAAATTTGATTTAAATGATTTGAGTTTCAAAT
TCAACATTATTCTTGACGTCTGGGAGGAGGATGGTAAAGGCTCATTTCAA
ACAGTTGCTCGTGACAAAACACATTTCAAGCTGAGAAAAGATTTGCAAAG
AAAATTGGTTTTTGTTATTGAGCAAACTTCTAATTgcaaactgaaaattg
aaagATGTTTTGGCCTCTTACTGGCACAAGGAAGGGATATTCCAGAAGGG
GATTTTCATTTACTTCAACAGATGTTTTGGCCTCTTACTGGCACAAGGAA
GGGATATTCCAGAAGGGGATTTTCATTTACTTCAACAGattGACACAGAC
ACACAGATACCTGGGAAAACCATCATACATGCACACTGGGATTCAACACT
AGATTATTGGAAAGTTTTGAACACAGATCCTGGAAAAGattGACACAGAC
ACACAGATACCTGGGAAAACCATCATACATGCACACTGGGATTCAACACT
AGATTATTGGAAAGTTTTGAACACAGATCCTGGAAAAGATAATAGAGTTT
ACATGACGGTGGCAGCAGACGTTGTTTTCAAAGACCTTAAAGAGCCTGTT
CGTTTTGTCAAGGAAGCCAAAGTGCGTGTTTTCCCTTCCAACGAGAAGTT
TTGGAACCCATCCAAACCGAGAATCCAAGAAGACTTTGTCCTTGAATTGA
AAGAGATAATAGAGTTTACATGACGGTGGCAGCAGACGTTGTTTTCAAAG
ACCTTAAAGAGCCTGTTCGTTTTGTCAAGGAAGCCAAAGTGCGTGTTTTC
CCTTCCAACGAGAAGTTTTGGAACCCATCCAAACCGAGAATCCAAGAAGA
CTTTGTCCTTGAATTGAAAGAGAACTTCAACGATGAAGGTGAAAAATGGT
TGGAGAAGGAGAGCTTACATAGTGCAGTGGAAGTTCAAAAGTTGAAGAAT
TCAAGTGGTTCTCTCTCTTCTATATGGAAAAACAATACCAATAAACCGAA
ACTGAGACAAGACAGTACAATCTCTGTGGAACCAGAAAACTTCAACGATG
AAGGTGAAAAATGGTTGGAGAAGGAGAGCTTACATAGTGCAGTGGAAGTT
CAAAAGTTGAAGAATTCAAGTGGTTCTCTCTCTTCTATATGGAAAAACAA
TACCAATAAACCGAAACTGAGACAAGACAGTACAATCTCTGTGGAACCAG
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000223_pilon | genome | sc0000223_pilon:323013..329653 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1312-1476:6477 |
| Aaloc | 1147-1311:3196 |
| Aaloc | 1045-1143:2056 |
| Aaloc | 979-1044:1788 |
| Aaloc | 754-975:1289 |
| Aaloc | 703-753:1064 |
| Aaloc | 1-702:1 |
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