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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000292_pilon:410710..417807- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037296 ID=XLOC_037296|Name=XLOC_037296|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7098bp|location=Sequence derived from alignment at sc0000292_pilon:410710..417807- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTTAGCTTCACTTTATGATGGAGTTGACCTTGGCAAAGACAAAGA
AAAAAGTGCCAATTTAAACCCAACCAAAATTGGTAAGCTTAAAATATTTT
TTCAATGTAGTTTTTCTTTCGGTCCTTTTTTTGTTGTAATATTGACTGCT
GGGGGGGTTGATCAAATAAGAGCTTGTAAAAACTCCAGCTTGTCCCGGTC
ATGTCACTCTTTGACAATTTCACAGAATTTTCAAAAATCTTGCACTAAAC
TTGTTTGGATCTGTTTGGACTGTACTACCCTTTTATCTGGAACAAAATAT
TTGATCTTTTAAAAGTTGGAGATAGAGAGGGTTTACTTTCTTTTTCTTTT
TTTTCACTTTTCACTTCTTTGCATTTTAGCTGGTTGGTCAGACAATCTTC
AATTCATGAAAACACAACTACAGTTAAAGAAGGCATCCACTTCTAAAGGA
ATCGTAAGAATCCTTTTATTTTGGTCCCGGGGGGAGGGGGCACTCGATTT
CTAAACGGCGGTATGTGCCGCCAAAAAATGCAGCTTTTCAACATTGAAAA
GGCACCCTTACAATGCATTTTACCAAACTTCTCACCCTTACAGTGTAGTT
TGATTTCATATCTAATTTTGCTGAAGCCATTTGAAAATGAGCCTGAGCTG
TCGACATAATTTGCAAAACAAATCAAAATGAGTGCGAGTCGAAACTATAA
ATATACATCAGTTTTTTACTATCAGACTTGCAATTCAGTAGTTCCTAAAC
ACACCCTTACAGTATATCAGCTCAAAAAAGACCCTTGTAGTGCATTTGCG
GGTCTCAAAAAACCTACCCTTTCGGGCGGCACATGCCGTAGGTCGGACCA
TATGAGTGCACACCCCCATGGGTTTTTGGTTCAAACATTGTTATATGTTT
CTTGATCATTTAGACCACGTTCACACGCCACGGTTCTGTTTCGCTCCGAA
TCGAAAAGAACCATTCTATTGGTTCTATTGCTTACGTCACTTCTAACCAG
TACAATAGCTTTATTTCTTTTCGGAGCGAACTGAACATCGTCATAAACTT
ACTGGTTTTTTCAATGTCTCGTCCTGTTCATATTGATAGATGAATTATTT
CAAAATTTTACAAACGTTTTTTTTTTCTCTTTTTAGAAAGGTGGAAAATC
AGTTTTATCCACAGGGCCTGGTAATATGACTTTAGTAAGTATCCTTCGTT
GTCGCATTTTGGCGAAGGACTTTCATTTTAACTCGATCCAGTATTGGTAC
TGGTAAAAGTTAAACCTTTGTGATATTGTGATAAAGTATATTTTTTGTTA
CTCAAACCTCCATATCTCAAATGTTTTGTGGTCCTTCAAGCTATATTACT
CTGAACTTATTCCTCTTAACCATATGGTCATGTAAAAGAAAACCTGACAC
AGTAAACAATTCAATACTAGACAAGAAACTACTACTAATACATTTTTTGC
CTCCCATTAACCTAAAGATCCCCTACAAGCCAGACTGTTTACAGTGAGTT
ACGTTGAGATACAGCCACCAAACTCTAAAATAAGGAGTGGAATGTACATC
AGCAAATCTAATAACCAATTTCATCCCTCAAGTTACCATTTTGAGACATA
CGCTATCTTATCCGCAGCTTAAGTTTTCGAGTTATAAAAGAGTGGTCATT
TTTATTACGTTTTTTTATCTTTCAGTCTTCAATAATGGCACCGGCAGACA
AACAAGTTGTTTTGATCGATGAGTACAATCCATTACGACCGAATGATTAT
AACGACTTCAAGGTTAATAAATTTAATGTCCGTCAAAGTGTTTGTTCTAT
CATTTAGTATGATCCAGGTCCATAACAATCACTGTACCATACTGAAAATG
TTAAGAAAACAAACTCGAAAAATGAAAAGAAAAAGATTTAAATTCTTGAA
TTAGACCAGTGTCCTAGATTCATAAAAGGCCTTAAAACAGGTTTTCGTAG
AGCACTCCTTAGATCAGGGCAAAATTTTGATATTATGCTCCTATAGGGTG
TGGAATTGACAGTTTTCGAGTGAATCGATTTGTAGTTAATCGATAGAACT
TATCAAGAGTCCCCCTTTACAAAATGTTTTTTCGAGGTCCGAAAATTTTA
AATATCTGATGCTTCCAACGGATTCAGCGTGAAAAGTAGATAAAGAAAAA
TGGGGTTATTTGTTAATGGTGCCAAGAAATGGCATTTTTAAGGCGAAAAA
TCGATGTTTTTGGCGTTTTCCAATGATGTCAGCATTTTTCTGGGAGCATT
TTCAGAAAAAATATCTCCCATAGCTAGATAGCCCTGAATTTAAAAATGTT
ATGGTTTGTTAACTTTCGATCTTCCGATCTCGAGATATTTTGCTCTAAAT
ATTGAAAAAAAGAAAAGAAGAGAAAAGTTTTTCAGCATACTTACCCACTC
TTCGGGATATGCGCACTGCTCTTGTTTTGAATATTGAATCTCTCCGGATA
TATCGCATGCGCACTGAGGTTTTAATGAAACAATAGAGAGTTTCGAAACC
TAGGCCAATCAGCTGTATTTTAAACATTCTTTATTTGAAATCTCTATTGA
TAAACATCTTTTGTTAAAGTTTTCTATTATGTTTAAGCCTATCATAGTTC
GGAAGGGGGTCACTACCCCCCCTACCCTAGAGCTACCCCCCCCTACGCTA
GGTTCTTCCCCCTTTTAAAATTTGATGCTACCCCCCTCAAAATTTTAAAA
TCCTACCATAATTCTACCGGTGAAAAAGCAAGAACATTCAGTGTAAATAA
GCAAATAATTAGGAAATCTGAATTTGGTGGTGTACGCTTTGATCAAAGGT
AAAAGTGAACTTCTTTCAGACTGTGTAACCAGAACTGGTACATATACACT
AAATTGAAAATAACTTTCTTTTTTCTTACCCCCCGCCCCTTTCTAGATGA
ACCCCCCCTTTCTGAAAACTTCCCCCTTTCTAGAAAAAATTCTCTTACCC
CCCCCCCTTTCTGAGATTTTCTGAACATCGCTACCCCCCTTTATAAAGGG
GGGGGGGGTGCGAACTATGCTATTAATAAGCAAAATCCCGCTGGGGGTCA
CTAGTGGCCGCCAATAGCAGTGCCTATAGACCAAGAGTAAGGCCTAAAAG
CCTGGAGCTGTCTATTGTGTAGACTAATTTTTCTCATACTCTGCAATCTC
TCACAATCTTAACAATTGCATCTCGAGAGTTTACATTTCATTCTAGGTAC
GCATGCGGGAAAAAGAGGAACGTGAAAGACGGGATAAAGAACGGCGACGG
GAACGGGAAGAACGTGAACGGGAACGCGAACGACGTGATAATAAAGACGG
CAATGATCGACGTGATGAACGGTTAACACTCATCATAAAAATTGAATTGC
ACTTTCTCTCGCTTGTATCCATTCTTCTTATCTTACTCTTGTCACTTACT
CCTAACCTCTTGTAGTCTCTTCCATTCTTCACTTAATCTCTTGAAGTCTT
TAGTAATCATACTTTTTCATTTAAACATCTGCTTTTTTTAAGTTTCTGAT
AATCCTTGAGTATATACTTGTTGATATATATCAACAAAATGTTTTTCGTA
CACTTTTGAATTGCATTTTCTTGCTCTTCTTCTTTAAATTTCCCCCAAAT
TTCCTCAACTTTTTCTATTAGGAGACGAAGTCCGCATCGTGATGATCAAG
ACAAAGATCGTGATCGTGACCGGAAACGAAGACGCGATGACGATCGTAGT
AGAGGTTTGATTCTTATTTGTCAATGTTGTTTGAATTGTTTTTCTTTGAA
TTTTAAATCAACGCATTTATATGTGTGAAAAACTCTTGTCAGTCTTATAT
TATCGAAATATTATTCTGTTCATTAGATTACGGAGGGCGTGCAGCAATCG
CACCTCCGCCCTCATTACTAGAAACGACGCCTGTGAATGTGGAAATCATC
CAAAAGAAGGAAAACAGTGCCGGAACAGGTGGCTTTTCTACAGGGTATGC
ATGAACATGATTGGTTATTATATTTGAATTCCCGAATTCTCCCATTTACC
TGCGGTTTTTACTTTATAGACAATATATGTTTCTATCGGAGTCTTAGTTT
GTAAGTCTTGTATTTGTAAGTCTTTTGGCTTGACGCAGATAGACATAAAA
CTAACTTTGTCGCAACCATGATTAACCCATTCCCAGAGCAACTTGACTAC
TCTTTATATCACTGACGGTTCTTCCTGCAACCTTATCTTTACAGAAATCT
TATCGCGTCTCAAATCATGGCGAAATACGGTTGGAAAGAAGGTCAAGGTT
TAGGTCGTGAAGAACAAGGTCTATCCACCTGTTTACAAGTCGAGAAAACT
GGTAAAAGGGCGGGCAAAATCATCAACAAAGACGTTGAAAAGGCCAAAGA
GAAAGATTCGTTCCCTCCGCCTTCTTTCCCACCACCCTCCTTTCCTCCAC
CCATGGGCGGTGCCATGGGTAGTGTACCGAATTCACCTTCACAGCCACAA
CCACCGGACGTTTCTGGTAATGACTCACAGATGGCGGATCTAATGAAGAA
CCCATCGAAAGTTGTCCTTTTGAAGGTTAGTCATTGTTTTATCCTATTAC
ACGATACATAATAATTAGAACAAATGAGAAAAAGCTCTCTTGATTAAATA
AAGTGTCAAAGTAAAAAAACAAGTAGTTCGTGTTAATTTGAAATATTTTA
AAAGATCTAAAATATATCTCATAAAGATATTCGTCGACAATAATAAATCG
TAGGAAAAAAAATTCGTCCAAAGGGGATTTATCGTCACTTTTTGTCGAAG
AATGCTTTCACCGATAAGCTAATAAACTAGTTAAAATAGCCAAGGTGTCT
TTTCTGGATTACAGGTGAACACCGTATTGAAAGTAAAAATCTATAGCAAT
AATGGAAACTTTGTCGCGCGATTAAGAAATACAGCGCCAGAGTTCATACA
CTGTCCCCAATTGCGTTTTCACTTTTTCTTGCTTTGAAAAAGGCTGAAGA
TTTCTAACTTTAAGCTCGATGATTTTATTCACTTTCGATTTCATTGCTTT
TTCCACAGAACATGGTTGGTCCTGGTGAAGTGGATGACGAATTACAGCCG
GAGATTGAGGAAGAATGCACCACAAAATACGGTGATATCATCAAAGTCAT
CATTTTCGAGGTACTTAAATAGTCTTGTCCTATAAATTAACCTGTTCGTT
CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
TTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTTCTCGAGATT
GGCTCATTAGTTTTTTCTGATTTTTGGCACAATGATGCAAAATGGTAATG
CCCAAAATGTAACGGAGCTCGATTTTTGAAAAAAAATCATTTCCGGCCGA
AAATGCCGGAAATATGCCGTAAAAACCGGTTTTTTGGCATTTTCTCGAGA
TTTCAATACGACAATACCTAAAATGTGACGGAGCTCGATTTTCGAAAAAC
ATTTTTCCGGCCGAAAATGCCGGATATATGTCGGAAAAACCGGTTTTTTG
ACATTTTGTCGAATTTTCATCTTTCATTTTTTCTGATTTTTTGCAGAAAG
ATGCGTATTCGCAATGCTCAAAACATGGCCGAGTTCGATTTTTGGGAAAA
AATTTTTTCCGGTTGAAAATGCCGTATATCATTTCTATTTTTTCACACAA
AAACATTATTGATAACAATGCTCACCATCGAGCATGATTCCATTATCAAT
AAAACTGATTTTTGCGACCAGAACTTTCTATTTATTTTTTCCCTACAACC
CTTCCCTCTCCCCCCCCATCATCAATCAATGATGAATTTCTTGCGTTGTG
CATTTTCGCTAAACGCTATGTTTTCTGACTGATTTTTTTTCATTTTTCTC
ATCGCATTGCTATCTAACTTTCATCATCAGGTAGGTCCATTCAGCATCTA
GCTTGTTTTAATCTGAAGATACCCAAAACCTGTTGAATTTTTTCCTTTTC
AACTTTTCACTCAACTTAGCAGTCCCTGATCATTCCTATTAGAAACTATC
AAAGATTTTATTGATTAAATCGTTAAAGCCTAATTTTAACCTTCATTTTT
TCACTATGTTCGCCTCTGAGCCAACTCATTCGGTATAAAAAGGCTAAATT
TTAGTTATCTTTTTGTCTTGAAGATCCCCAATGCACCAGAAGAAGAGGCT
GTTCGTATTTTTGTCGAATTCAAAAGAATGGAATCTGCCATTAAAGGTAT
TGTTAAAAGATTTAATCTTTTTAATCAATTTAGCCCTGAAAACATGTTAC
CCAACGAGTTCGATTTGACGTCTAAGGAAGTTGGCTCTTTGTAATTAATT
TTTTCCTGGGACGGCCTGTTGCACACACATGTATTTGCTGGAAGAAAATT
TTAGTCCTTTAGGTCAGCCTTGTTTTGTTATGTTTCATCAATTTGCTCCC
TTGTTTCAAGTCCCCGTTATTTGTAATTTGTATTAAGTTCCCGCGAAATT
TTAGAAAATCGTCAATCCGCGAAATTAAATTCCCGCGAAATTTAATTTGT
TTCGCGCATTCCCCCAAATTCGTACTATTATAAGCCTTAAAACAGGTTTT
TTGCTTATTTAATAACGTTTTTGGTCAAAAATATCCTGCAACCGCGAAAT
TAAATTCCCGCGAATTTTTCGAAAATTGATGAACCGCGAAATTAAATTCC
CGCGAAAAAAAATAATTTGACCAACTGCGAAATTGAATTTCTTCCCTTAA
GGTAATCATGACTGCGCACAAATAAACGCTTCTTTTTTATCAAAAGATTC
CCATCCTTTCAAAGTCCGTCTCAAAATTATGTTGACACTCAACTTTTTCA
CGATTTCTCAGTACCCACTTAAAATTCTATATTAAAAAGTCGTTACACCG
TTGGAAAGATATTTACGAGGAGAATATTCTAAGGGATCAAAACAAGATGA
AAAAAAATAAGATTTTTACTATTTTTCTTTGTTTACATTATCTATTTCAG
CTTTGATGGATTTGAACAATCGGTTTTTCGGCGGACGATCCGTCTCTGCA
TCCTTCTACAATGTCGATAAATTCCGAAGGCTCGATCTAGCAAGTTAG Coding sequence (CDS) from alignment at sc0000292_pilon:410710..417807- >XLOC_037296 ID=XLOC_037296|Name=XLOC_037296|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2442bp|location=Sequence derived from alignment at sc0000292_pilon:410710..417807- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTTAGCTTCACTTTATGATGGAGTTGACCTTGGCAAAGACAAAGA
AAAAAGTGCCAATTTAAACCCAACCAAAATTGATGGCGTTAGCTTCACTT
TATGATGGAGTTGACCTTGGCAAAGACAAAGAAAAAAGTGCCAATTTAAA
CCCAACCAAAATTGCTGGTTGGTCAGACAATCTTCAATTCATGAAAACAC
AACTACAGTTAAAGAAGGCATCCACTTCTAAAGGAATCCTGGTTGGTCAG
ACAATCTTCAATTCATGAAAACACAACTACAGTTAAAGAAGGCATCCACT
TCTAAAGGAATCAAAGGTGGAAAATCAGTTTTATCCACAGGGCCTGGTAA
TATGACTTTAAAAGGTGGAAAATCAGTTTTATCCACAGGGCCTGGTAATA
TGACTTTATCTTCAATAATGGCACCGGCAGACAAACAAGTTGTTTTGATC
GATGAGTACAATCCATTACGACCGAATGATTATAACGACTTCAAGTCTTC
AATAATGGCACCGGCAGACAAACAAGTTGTTTTGATCGATGAGTACAATC
CATTACGACCGAATGATTATAACGACTTCAAGGTACGCATGCGGGAAAAA
GAGGAACGTGAAAGACGGGATAAAGAACGGCGACGGGAACGGGAAGAACG
TGAACGGGAACGCGAACGACGTGATAATAAAGACGGCAATGATCGACGTG
ATGAACGGTACGCATGCGGGAAAAAGAGGAACGTGAAAGACGGGATAAAG
AACGGCGACGGGAACGGGAAGAACGTGAACGGGAACGCGAACGACGTGAT
AATAAAGACGGCAATGATCGACGTGATGAACGGAGACGAAGTCCGCATCG
TGATGATCAAGACAAAGATCGTGATCGTGACCGGAAACGAAGACGCGATG
ACGATCGTAGTAGAGGAGACGAAGTCCGCATCGTGATGATCAAGACAAAG
ATCGTGATCGTGACCGGAAACGAAGACGCGATGACGATCGTAGTAGAGAT
TACGGAGGGCGTGCAGCAATCGCACCTCCGCCCTCATTACTAGAAACGAC
GCCTGTGAATGTGGAAATCATCCAAAAGAAGGAAAACAGTGCCGGAACAG
GTGGCTTTTCTACAGGATTACGGAGGGCGTGCAGCAATCGCACCTCCGCC
CTCATTACTAGAAACGACGCCTGTGAATGTGGAAATCATCCAAAAGAAGG
AAAACAGTGCCGGAACAGGTGGCTTTTCTACAGGAAATCTTATCGCGTCT
CAAATCATGGCGAAATACGGTTGGAAAGAAGGTCAAGGTTTAGGTCGTGA
AGAACAAGGTCTATCCACCTGTTTACAAGTCGAGAAAACTGGTAAAAGGG
CGGGCAAAATCATCAACAAAGACGTTGAAAAGGCCAAAGAGAAAGATTCG
TTCCCTCCGCCTTCTTTCCCACCACCCTCCTTTCCTCCACCCATGGGCGG
TGCCATGGGTAGTGTACCGAATTCACCTTCACAGCCACAACCACCGGACG
TTTCTGGTAATGACTCACAGATGGCGGATCTAATGAAGAACCCATCGAAA
GTTGTCCTTTTGAAGAAATCTTATCGCGTCTCAAATCATGGCGAAATACG
GTTGGAAAGAAGGTCAAGGTTTAGGTCGTGAAGAACAAGGTCTATCCACC
TGTTTACAAGTCGAGAAAACTGGTAAAAGGGCGGGCAAAATCATCAACAA
AGACGTTGAAAAGGCCAAAGAGAAAGATTCGTTCCCTCCGCCTTCTTTCC
CACCACCCTCCTTTCCTCCACCCATGGGCGGTGCCATGGGTAGTGTACCG
AATTCACCTTCACAGCCACAACCACCGGACGTTTCTGGTAATGACTCACA
GATGGCGGATCTAATGAAGAACCCATCGAAAGTTGTCCTTTTGAAGAACA
TGGTTGGTCCTGGTGAAGTGGATGACGAATTACAGCCGGAGATTGAGGAA
GAATGCACCACAAAATACGGTGATATCATCAAAGTCATCATTTTCGAGAA
CATGGTTGGTCCTGGTGAAGTGGATGACGAATTACAGCCGGAGATTGAGG
AAGAATGCACCACAAAATACGGTGATATCATCAAAGTCATCATTTTCGAG
ATCCCCAATGCACCAGAAGAAGAGGCTGTTCGTATTTTTGTCGAATTCAA
AAGAATGGAATCTGCCATTAAAGATCCCCAATGCACCAGAAGAAGAGGCT
GTTCGTATTTTTGTCGAATTCAAAAGAATGGAATCTGCCATTAAAGCTTT
GATGGATTTGAACAATCGGTTTTTCGGCGGACGATCCGTCTCTGCATCCT
TCTACAATGTCGATAAATTCCGAAGGCTCGATCTAGCAAGTTAGCTTTGA
TGGATTTGAACAATCGGTTTTTCGGCGGACGATCCGTCTCTGCATCCTTC
TACAATGTCGATAAATTCCGAAGGCTCGATCTAGCAAGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000292_pilon | genome | sc0000292_pilon:410710..417807 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1129-1224:97 |
| Aaloc | 1054-1125:926 |
| Aaloc | 952-1053:2091 |
| Aaloc | 622-951:2904 |
| Aaloc | 505-618:3271 |
| Aaloc | 421-501:3477 |
| Aaloc | 406-417:3792 |
| Aaloc | 292-402:3903 |
| Aaloc | 205-291:5424 |
| Aaloc | 157-204:5963 |
| Aaloc | 85-156:6718 |
| Aaloc | 1-81:7099 |
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