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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000476_pilon:80343..83922- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037275 ID=XLOC_037275|Name=XLOC_037275|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3580bp|location=Sequence derived from alignment at sc0000476_pilon:80343..83922- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAGAGAGGTAGTGGTTTACTGTAGAGATGGTACACGAAAAGCTATACA
CAAGATCAAATACTGCAGAAAATGTCAGCTTTCCGAGCATTACTCGTACC
GTGTTACAAGCTACTACAGATATTTGGACATAAAAGAATACGAAAATTCA
AAATATCTCTTCAGCAGCGAGAGCACTGCATTCGAAAAGGAGCTGCTAAG
GGAATATAAATGGGAATTGGTTATTGGAAAAATGAGCTTTTCAACTAAAG
CAAATATCTACAATCAAGTAAACAAGAACAGGTAAGTGGTAATTTTCTGA
TTAGACATACTGCATGGATGTAAAAAAACAGATTGAGGATTTAACTCGTA
CTGTACTGTCCATCGATCATTGGAACCAAACAGCTGCTTAGTTGCTTTGG
GAAAAAGTAATTAATTTTGCTCATTTTTATGGAAGAGCTAAAGTTGGTAT
GTGTTTGAATAAAAACACATTGCAGTTTTAAATTTGTGCATCGATGTATA
ATTGTTTTATAAATCAAAAATAAGAGACTATGCTATGAAAAAAACACAAA
ATCCCTCACTTCTATGGGTTGCTGCTCGTAAATTCATCAATGAATTTTAA
ATTTTATTAAACCTTAAGTAAAGGTAACCTTTCATCAATCATCTGTCAAA
ATTTGAAAGCAGCCGCTTTTTTAGCTGTGAAAATTTTTTGTGGGTAATTG
CCACCGGAGGAAGCCTATAGCTTCTGAGGATGGCATTCGTAGACACATAA
GGAAGTTGGGCAAAAATCTCATAATTTTGCGCACGTTTTCGGTATCTTAG
TTCCGCTTAACGGTAGCATTCTTATCTTACGGTTTCTCTATTGTTTTATC
ATCATCAAAAAGACTTTTTCTGAATTATTTTGATCTGATTACTCATTTTG
AAATGCCAGTTTGTCTTCTAAGGAAATTCCCTTTTCTGGGGAATTCCCTT
TTTATACCACAAGTAGTTATTAAGCGCTCTTCGTAGGTTAAAAGTATTAC
TCTACTCAAAGTATTTGAACAGTTATGTTGCTAAACGTATACATTAATAA
ATTAACATATGAAGAGCAGTATCTTCAGATATATACGCTTTTTATAGGAA
AAACCAGTCAGTCATATGATTCTGGCTGGGCTGCTCTTAAATTTATATGA
GTTTTTCAGCCTTAAATGTCAATATTAATTAAAATGGAAACATGTACTTC
TCAGTAATTTCTGAAACCTGAGGTTCGGATTCTTCTTAATTTGTTCTTAG
GTTTTGGCCACATTTCAGCCTCGTATTCTTATGAAATTGTTTTTATAAAA
AACGTGTAAGACAAGGCACGGATGTCACTCTAAGTAGACTGTAAATCACT
CCCTTGACACATTTGTTAGCATTTGAAAGAATTTTGTCTCAGATGAGAGG
TCACTCTTAACAAAAATTACTGTAGGGCTAAGATCATTCATTTTGAAAGC
AAATTCAACTCTATGTGTTCGTTTTGCTGCGGTGGCACCTTAATGAAAGT
TATGGCTAGTTTTAAGAATGTATGTTAGTTTTAACCAACGCAACATCTTC
AATTTTGAATTTGTAAAGTTTCTCTTTGTGAAACTAAAAATCTGCATATT
TGTGAGTAAAAAATTACAAATATTAGAAGTGAAAAAGCTTGAAAATTCTA
CAAAGTTTTATGTTCATCGCCAAAGTTATGGGGATTTCGGAAAAAAAATC
ATGCAATCTTCACAACCTTGTTTCCCCTTCATACAAATAACCCCTCCCCC
TGGGCATGACCAAACTCAAGGGCAGATAGGGTTAATAGGGTGGATAAGTA
CTTTTTGCAGGCTTTCAACGACATTGACCTAGACAGCTGGCAAATTATTC
ATAATATATTTATCAAACCCGCCACCCTTACTAGATTTGGGATTATTAGG
CGCCTGAGTACAATGGATGAAGTTTTCAATCGTTCTTCCATGTAAAAACT
CCATACTTCCATAGTTTATTTTTTGTTTCACTTTCAGAATGAATATATTA
CGAAATGAACTCGACAGGCGTCGTTTGGAAGAAGGCTTTCTGCTCTACGC
TGTTTGTGAAATATCAACAACTTATGATATAGTTATGGACAGTTCAATTG
ATGATTTATACGCCTTAATTGATTACATAATACCATTCTTTTACAATGCG
TTCATCAAAAGATGGTCAGGTAAGTCTATGAGACGCTGCAAAACAAAATT
TTGAGTTATAATAAAGGCATCGTGTGCATCTGCTTTTGCAAAGGAATTCT
ATTATAGTCTGGTAGAATTAGGCTACGACCTTGACATAATTCCAACCAAG
CTGAAATTTGGCACAAAGCTCAGTCATAGGATACTTAGTCACCAGAAAGG
AGAAAGTCAAAAAATATTTTTCTTCTACATTCGAGGAACAATATTTCAAT
CAATAATAAAACCCCTTTCCACAAGTTGGACACGAGCCCCTTTTTCAGAA
CATAGCATTCTTTACTATTATTGTAATTAGACTTTTAGACAATCAAACGT
TTTTTATTTTCCAAAATTAGTCGAACTTGAGCTAAAAATTGTTATTTTTG
GTCAAACTTGTTGGGATTGGGTTGTGCTTCATTGTCTAATCGCACGATGA
GTTATTTTTTCTTATTTGGCGCCCCTTCATAGAGAGCAATTAATCGTTGA
TTGCATCCTGTAGAAAGCAATTAATCGTTTAATCACACTCTTCAATGCCA
CACCAATGTTTACAATATTGATTTTAATGTGTTTTTTTGTAGTTATTTTT
CATCATTCAAACGTTTTAATTGCATTCGAAATTCATTTTTTGAGAAAGAA
AATCTGTAAAAAATAGTAGAAGAAATATAGAGAGAAGAGAAAAATACGTA
TCAGTGTAATTTACTTTCCTAACGGGAAATAAGTAGTGAAACCCATTGTG
CGATTAACTCGTAATCAAATAATAACTCGTACAATTCGAAAATTGCATTC
GTGATTTTTTTGTTTCGAATTTTCCTCGTCCTTTCGGACTCGGAAAATTA
ATAACAAAAAAATCACGCGTGCAATTATTCTCGAGTTACACTCGTTATCA
TGTGATTACATATATCAGATGCCCGGAAAGCCCGAGTTACTAAAACTCGA
GTTACAAAAACCCGAGTTACGACAAATGTGACGTCACAAGTCTCAAATTA
TGACGTCATAAGGAGGTTTTGTAACTCGGGTTTTTGTAACTCGGATTTTT
GTAACTCGAGTTTTCCGGTCCTCCATATACCAAAAAGAAAAAAAAATTTG
GCTTAAGAAAAAAATAAAAAATAAGAAAGATAAGGACTTCACATCAATTT
CCACTAAAGATTTACCAATTAAAAAGTTGCGGGTTATGAGTAAAAGCCAC
GGCGTCATTGAGTCATTGACAGTTGATATTTTTTTATTTTCTGTGTTATC
TTCATTCGCGAAAGTTTAAAAACATTTTATCGTATTTCTTCAGAACATCG
ATGTAAAACACCAGGATGTGGAAAGGTTATTGTGCTCGATGGAAACATGA
AAAACACCCGACAAGTTTGTTCTGTAAAAGATGTTACTAGCTTTATCTTT
CGGACGTGGGCAGAAGAAATAAAAACGGGT Coding sequence (CDS) from alignment at sc0000476_pilon:80343..83922- >XLOC_037275 ID=XLOC_037275|Name=XLOC_037275|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1200bp|location=Sequence derived from alignment at sc0000476_pilon:80343..83922- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAGAGAGGTAGTGGTTTACTGTAGAGATGGTACACGAAAAGCTATACA
CAAGATCAAATACTGCAGAAAATGTCAGCTTTCCGAGCATTACTCGTACC
GTGTTACAAGCTACTACAGATATTTGGACATAAAAGAATACGAAAATTCA
AAATATCTCTTCAGCAGCGAGAGCACTGCATTCGAAAAGGAGCTGCTAAG
GGAATATAAATGGGAATTGGTTATTGGAAAAATGAGCTTTTCAACTAAAG
CAAATATCTACAATCAAGTAAACAAGAACAGGAAAGAGAGGTAGTGGTTT
ACTGTAGAGATGGTACACGAAAAGCTATACACAAGATCAAATACTGCAGA
AAATGTCAGCTTTCCGAGCATTACTCGTACCGTGTTACAAGCTACTACAG
ATATTTGGACATAAAAGAATACGAAAATTCAAAATATCTCTTCAGCAGCG
AGAGCACTGCATTCGAAAAGGAGCTGCTAAGGGAATATAAATGGGAATTG
GTTATTGGAAAAATGAGCTTTTCAACTAAAGCAAATATCTACAATCAAGT
AAACAAGAACAGAATGAATATATTACGAAATGAACTCGACAGGCGTCGTT
TGGAAGAAGGCTTTCTGCTCTACGCTGTTTGTGAAATATCAACAACTTAT
GATATAGTTATGGACAGTTCAATTGATGATTTATACGCCTTAATTGATTA
CATAATACCATTCTTTTACAATGCGTTCATCAAAAGATGGTCAGAATGAA
TATATTACGAAATGAACTCGACAGGCGTCGTTTGGAAGAAGGCTTTCTGC
TCTACGCTGTTTGTGAAATATCAACAACTTATGATATAGTTATGGACAGT
TCAATTGATGATTTATACGCCTTAATTGATTACATAATACCATTCTTTTA
CAATGCGTTCATCAAAAGATGGTCAGAACATCGATGTAAAACACCAGGAT
GTGGAAAGGTTATTGTGCTCGATGGAAACATGAAAAACACCCGACAAGTT
TGTTCTGTAAAAGATGTTACTAGCTTTATCTTTCGGACGTGGGCAGAAGA
AATAAAAACGGGTAACATCGATGTAAAACACCAGGATGTGGAAAGGTTAT
TGTGCTCGATGGAAACATGAAAAACACCCGACAAGTTTGTTCTGTAAAAG
ATGTTACTAGCTTTATCTTTCGGACGTGGGCAGAAGAAATAAAAACGGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000476_pilon | genome | sc0000476_pilon:80343..83922 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 466-600:136 |
| Aaloc | 283-462:1593 |
| Aaloc | 1-279:3581 |
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