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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:729990..733158+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037266 ID=XLOC_037266|Name=XLOC_037266|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3169bp|location=Sequence derived from alignment at sc0000120_pilon:729990..733158+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTACCTTTAATCTTAAAGATAATTGCAATGTTATTAATTAGCTA
TCATTTGGTGGATGGGGAGAAAGGAGACAACAAAAGAGGGAAGACTAGAG
AAGAAGCAAAGCAACGTCAAAGAGAAGCTCGAAAAgagtttaataaaata
aaaacagagcACCAGTTAGATCGCAAGATTGCTAATTCAATCATGAGAGC
TGACAAAAAAGAAGGTAAACTGGCTATCCAAAGAAGAGGGCAATATTTCC
AAATGAAGATCAAAGAGATTCTTGAAAAGCGTTCTCAAGAGGAAAAGGTA
AATCAAATTTCGTTTGCCGTAACTTTGGCAAGATGTTCctgaaacttgaa
attcacAACTCCTCAACAAGAAtataattaaagtctgtctcaaaataatt
tgcagctggagaaaaaaatggctgtaactttttatagaattcgaatcaag
ttgcgattttgtgctcgttaaaaagatattcgtgagtggaatattatgaa
gtaaaaaatttgagaaaaaaaaggaaaatgacaatgaaaaatgaagaaga
aaaaaatcaacttcttgtagaaatgtggtataattaccattttcacagga
gtgactcttcaatcttagatcatcatcagtgtgaaatgatttttcaaaaa
tattcattcaatcaaaagatatcgaacaaagtttattgctggttgatcga
caaaaggctgtttttttgtcgttttttactactttatagtgtttatagag
tcaaccagcaataaactttgtttgatatcttttgattgaatgaatatttt
tgaaaagttttttgacagtgatgatgatctaagattgaagagtcactcct
gtgaaaatggtaattataccacatttctacaagaagttgatttttttctt
cttcatttttcattttcattttccttttttttctcaaattttttacttca
taatattccactcacgaatatctttttaacgagcacaaaatcgcaacttg
attcgaattctatcaaaagttacagccatttttgtctccagctgcaaatt
attttgagacagactttagtcaGCAGCCCAAACAACAAACAAGATCTTTT
CCGCAGAGAAGAGTTCATTACAGGCTAGCATATACTAGCATAAACCACGC
GGTTTTTTATAACGGATCGTCTGGCACAGGCTAGCCATCATCCAAAAATT
TGTACTCTTTTGTTGACTACTTCTGTGTTGCTATGGTAATATACCGTTAA
GGAAAATCTATAAGTTAACACAGGTTAACATGGTTTTACGGATAGGAACT
GAAATCTTATCCCATAGGTATCCCTACACttttgtttatgtcagtgtaac
attttaattttgttttattattttgtttatgtAACTATCAAAAGAGGCTC
ATCTCTGCTGTTGAGTTGAGAGTTTTTAAGTACACGAGGCAAAAGGTGCC
CTGAgggatgtttttttttattacagtGACTCGTGTAGTTATTGGGTAAT
TCGAGAATCAAAAGTAAGCCAGAAGAGTCATTTTAAAGAGAGCGTTATTC
TATTGCCACTTCTTGCACACTATGTAAAGACTAAGAACTATTGGGCATGA
GCCAATATTTGCAGATTTCCACAAAGCAGCGTGTATTTTATTTAAACAAC
AGGCATGGAAATGGCGAATGAAAGATGCTGAATTTGATATCGTCAGAAAT
GAGACTGATTTTTCGTTCGGCGTTCAAGCTGGTTTCATTCAAATGAGTGC
TGAACTGGCAAACGGTGCAAACATCACTCTTCAGCTATTCATGTTCAAAG
ATGCTGGCAATATAACTGGTGAAGATGGAAACATTTATGAGCTCGTCAAA
GGAGGGACCAAAGCTAACATCATTATGTAAGTTGTAATAACAGTGAACCT
CAGTGGTGTgtaaaagaagaagtttttctctctttgaaacaaATTTCACA
GAGATTTAAACATTTTAAATCATTACTATAGCACATAATGAAGGAAAAGA
TGTGCTAAAACTTTCCATATTCAACAAATTTGGTCTATTAAATCAGTACC
CGTTTTCGGAAACTTTGCTTATATCTTCAGAATCTGAATTCAGTTCGGAA
AAGCAGCTTGGTCATCGAAACTAGGGCGGTAGATCGAGAGTAGACAAACT
TTAAATAATATTTCATCATTCCTATCTCTCTAAAACAGACACTGGCCAAA
TCAAGTGGACCATTTAGATGTGGTAATCTTGATCAAGTGTGGGTTTGATG
Gcaaaaaatcgcggaaagcaaagaaaaaatccaaagcacgtggacggaat
ggatcacaaaaagCTGTCAATAGACGACATCTtgaaactttctcggtttg
ctCGAATGCTCAAATGACATTTTCACCATCAGTAAGTCGGTTCATTCCAT
CATTTTAGAGATTTCCATTGAGTGATCATTGTGGGATAATTACTTTTCAA
TGAGCACTGAAAGCCCATAGcccccccTATTAATCTATGCTTCTTTAGTG
TAAAACCCTGTTGGGCCAAATTATGCCTGTCTTTTTTAACTAACTCACTA
GATCTGGTTTCCTAATGATAGCACTACTCACAATCCCTATTCCAATCCGA
GGCCAGGATTAAGAAACTATCTCATGAGTTTGTAGGGCTCATTAATCATT
TTAATGATAACAATAGCCATAATCTCTTTTTAGTATTTCTCGAATGGAGA
AGATGTTGATATGCAAGATGGGTATCCAGAGCcacaaaaattgtcaaaga
AAGAAGAATCCACCGAAATTGTATTACGTTTCAATGCaaccaatattttt
tatgacccAACAGTAGAAACAGGAGATGATATTGGTGATGACAGTGAAGA
TGATAGTGAAGAAAAGGCTGAAGCAGATCAAGCATTATCACCACCACCGA
GAGGTACCCCTGAAGTAGATCAAGTATTACCAGCACCAACAGACATCAAC
AATGTAGCAAATCCATCAAACGAaggtgaaagtgaaagtattgCAGAGAA
GACAACAATaccaaaagaagaaaatgaagaagccAATCTCATGAATGTTG
GACGCAATTTCATCACTGGTAGGCATCATTCAAGCGATGGGGTTCCTTCG
TTGACATCGCCAGTATTACTTTTGGTCAATTTGGTCAGTTTCGCTTTGCT
GAAATCCTTGATATTTTAG Coding sequence (CDS) from alignment at sc0000120_pilon:729990..733158+ >XLOC_037266 ID=XLOC_037266|Name=XLOC_037266|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2400bp|location=Sequence derived from alignment at sc0000120_pilon:729990..733158+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTACCTTTAATCTTAAAGATAATTGCAATGTTATTAATTAGCTA
TCATTTGGTGGATGGGGAGAAAGGAGACAACAAAAGAGGGAAGACTAGAG
AAGAAGCAAAGCAACGTCAAAGAGAAGCTCGAAAAgagtttaataaaata
aaaacagagcACCAGTTAGATCGCAAGATTGCTAATTCAATCATGAGAGC
TGACAAAAAAGAAGGTAAACTGGCTATCCAAAGAAGAGGGCAATATTTCC
AAATGAAGATCAAAGAGATTCTTGAAAAGCGTTCTCAAGAGGAAAAGATG
AAATTACCTTTAATCTTAAAGATAATTGCAATGTTATTAATTAGCTATCA
TTTGGTGGATGGGGAGAAAGGAGACAACAAAAGAGGGAAGACTAGAGAAG
AAGCAAAGCAACGTCAAAGAGAAGCTCGAAAAgagtttaataaaataaaa
acagagcACCAGTTAGATCGCAAGATTGCTAATTCAATCATGAGAGCTGA
CAAAAAAGAAGGTAAACTGGCTATCCAAAGAAGAGGGCAATATTTCCAAA
TGAAGATCAAAGAGATTCTTGAAAAGCGTTCTCAAGAGGAAAAGGCATGG
AAATGGCGAATGAAAGATGCTGAATTTGATATCGTCAGAAATGAGACTGA
TTTTTCGTTCGGCGTTCAAGCTGGTTTCATTCAAATGAGTGCTGAACTGG
CAAACGGTGCAAACATCACTCTTCAGCTATTCATGTTCAAAGATGCTGGC
AATATAACTGGTGAAGATGGAAACATTTATGAGCTCGTCAAAGGAGGGAC
CAAAGCTAACATCATTATGCATGGAAATGGCGAATGAAAGATGCTGAATT
TGATATCGTCAGAAATGAGACTGATTTTTCGTTCGGCGTTCAAGCTGGTT
TCATTCAAATGAGTGCTGAACTGGCAAACGGTGCAAACATCACTCTTCAG
CTATTCATGTTCAAAGATGCTGGCAATATAACTGGTGAAGATGGAAACAT
TTATGAGCTCGTCAAAGGAGGGACCAAAGCTAACATCATTATACACTGGC
CAAATCAAGTGGACCATTTAGATGTGGTAATCTTGATCAAGTGTGGGTTT
GATGGcaaaaaatcgcggaaagcaaagaaaaaatccaaagcacgtggacg
gaatggatcacaaaaagCTGTCAATAGACGACATCTtgaaactttctcgg
tttgctCGAATGCTCAAATGACATTTTCACCATCAACACTGGCCAAATCA
AGTGGACCATTTAGATGTGGTAATCTTGATCAAGTGTGGGTTTGATGGca
aaaaatcgcggaaagcaaagaaaaaatccaaagcacgtggacggaatgga
tcacaaaaagCTGTCAATAGACGACATCTtgaaactttctcggtttgctC
GAATGCTCAAATGACATTTTCACCATCATATTTCTCGAATGGAGAAGATG
TTGATATGCAAGATGGGTATCCAGAGCcacaaaaattgtcaaagaAAGAA
GAATCCACCGAAATTGTATTACGTTTCAATGCaaccaatattttttatga
cccAACAGTAGAAACAGGAGATGATATTGGTGATGACAGTGAAGATGATA
GTGAAGAAAAGGCTGAAGCAGATCAAGCATTATCACCACCACCGAGAGGT
ACCCCTGAAGTAGATCAAGTATTACCAGCACCAACAGACATCAACAATGT
AGCAAATCCATCAAACGAaggtgaaagtgaaagtattgCAGAGAAGACAA
CAATaccaaaagaagaaaatgaagaagccAATCTCATGAATGTTGGACGC
AATTTCATCACTGGTAGGCATCATTCAAGCGATGGGGTTCCTTCGTTGAC
ATCGCCAGTATTACTTTTGGTCAATTTGGTCAGTTTCGCTTTGCTGAAAT
CCTTGATATTTTAGTATTTCTCGAATGGAGAAGATGTTGATATGCAAGAT
GGGTATCCAGAGCcacaaaaattgtcaaagaAAGAAGAATCCACCGAAAT
TGTATTACGTTTCAATGCaaccaatattttttatgacccAACAGTAGAAA
CAGGAGATGATATTGGTGATGACAGTGAAGATGATAGTGAAGAAAAGGCT
GAAGCAGATCAAGCATTATCACCACCACCGAGAGGTACCCCTGAAGTAGA
TCAAGTATTACCAGCACCAACAGACATCAACAATGTAGCAAATCCATCAA
ACGAaggtgaaagtgaaagtattgCAGAGAAGACAACAATaccaaaagaa
gaaaatgaagaagccAATCTCATGAATGTTGGACGCAATTTCATCACTGG
TAGGCATCATTCAAGCGATGGGGTTCCTTCGTTGACATCGCCAGTATTAC
TTTTGGTCAATTTGGTCAGTTTCGCTTTGCTGAAATCCTTGATATTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:729990..733158 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 715-1200:2684 |
| Aaloc | 523-714:2190 |
| Aaloc | 298-519:1653 |
| Aaloc | 1-297:1 |
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