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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:683463..689336+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037264 ID=XLOC_037264|Name=XLOC_037264|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5874bp|location=Sequence derived from alignment at sc0000120_pilon:683463..689336+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACATTCTGGAGTTTATCAACGCTTTAAAGGTACTGTTCTCACTTTT
CCccctattttttataaaatatcaacatgaattttatttgtttcttttac
TGCATTCTTTTTGCTTTAGCAATCTGGTTTCTGAAAATAACATAATATTC
CATACCATTTCACTGTCAAGCTCTAATAACAAACTCTTCTTCAAAGTTTT
GAACCAACGCatatccattaaattttgttagaGTCCTAAATACTCATTAC
ACTTGGCGACCTACGAGGAAAAGAAATGTTGAAGTACCATACTCACATCA
TAAATATACTATATGAAATCATTGATTCTCTCTTTCATCAAAAGACTGGT
GATAGACTCCTCttggtcaaaatcaaaaacattaaagCTTCAAAACGAAG
CCATTGAATTTTGATCGAGTCCTAAATAcaagaaatgttgaaatatcaCA
TAAATATAACACAAGGAATTTATTGATTCTCtttttttAGCAAAAGACTG
GTGATGATTATTTCATGCATTTGGAGAAGTTGAAATCGTCACCTGAATTG
ATACAAGAGACCATTGATGTGCTAGAATTAAAAAGTGACTCTGATGTGAG
TTATTCAGAATAATGATGATAAATTCCCAAATTGCTCCTTGTTcaactca
aaaatcaaaactttcaaaaagcaACCCTGATTATACATTTTCTCCATCCC
ACTTGAAATTGAGCCATAAATTTTCCAAGGAAGACATATCATTTTGTTCT
AACATGTTATTGTGTACTTTGTTGACGTTATTTTtctttagctctagttt
agacggcccacttttcgccctgcctattctaattgtttgaGTAGGTAtaa
agtgggcacaaagttaaaatctttgcttggaaagggTTGAACGAAGATCA
ttcattgacgtcaaaagaaggtaatgcattgactttagacagccaacttt
atgcccactttaatgaacaattagaataggcagggcgaaaagtttTTCgc
ctaaactagagcttattgATTTAATTTACTATCCTGTAAAGATAACACTT
TCTTTTTCTAACTTTCCATAGTTGGCAAATGCAATATGTGAAGCATTGTT
TGTTCTTTACACTGATGTTGGTAACGAATCTCACAAAGTTTGTTTGCAAT
TTATCCCGGCTGTAATATGGGCGTACTACTGTCAGCTTTCTCAAAAGgta
tattgtttttatttaataaaagTATGATTATAATGTTATAATGCTAGTAA
TAATGTTAGTTGAACGTTGAAAGAACTTGCTGTGTCAGTTGACACATTAC
CAAGTTTATGTACAGTATgcgtgtttttctgcgacggagacggtaaggtg
gttctaatttttttagatcctgactgactgaggacgacggtaaatcagca
cttttaccgtcctcgactTTGCGgggcagaactgcgggttattccattCG
CTTCAGttacaaatacataaactcgctattgcaTTGCTAGACTAAGAAGT
GAAACTTCAATAAAATCCAGCGTCAAACATTAATTGTTATCTTCTATTTC
TAGGCAAGAGGAAAGCCTGAAGCTTTGCTATTAGCTTTCTATAATAAGGT
AAACCTTTATGATAACCATCATGAAATTGTAACAATTGTCTTGTTCTTAA
CCCTAGAAAAAgatcattaaattttgatttaacaaatCCAGGTTTGGAAA
CTCAATCTGTTGAGATATGCAGAGGTATTTCTCCTACTCTCCTCACTCTA
TTTCTACTGTATCATCGTAGATTTCTCCTTTTACTAAATCAagtgaattt
gaaattaaaaattatttttgtttacttttcagtgTGTAACAAGGAATGTG
GAAACACCCTTCACCAACTCTTTTCGTATTCCGAAACTCAGCAAACCTTC
CGTTTTTCACGAGGTATacttttgattttatgttttttttcttatggtta
tttttttgttaaaaccgATGAATcgaatttctttcttttattcaaataca
aaaattgTTCCGTTTCCCTTTAAAgtattaccttattacacaaatatagT
TAGGCCAAAATCCAACGGCTTTGGAAATGATACGAAtgacttgttttttt
tcattttcttttgcttttacctcgcggttctttgcagattttttttgcgt
gaacataaacttttgcgaattgccctctcaagaattttctacatttactt
tcgcgaaaagatctaaaattcacgaaaatcgcgaaagtttgccTAAAGTA
GTCGAAATTAAGGCGGCTTTTAttaacataaatttttttattcgtGTCTA
AAATCACGTTTCGTTATATTTGTAAAATAAGGTATATCcacaaaaatttt
aagttttcaatacTCTTCTTCGTTTTAGCCCATGCAATTAGCGGCTTCAG
CTACGTTAACGGAAAACGCCTTGAATCAACATGACAAATCCAATAAAACG
ATCATTTTTAAAGGACCCACAAAACGCTTAGATCATATTCCTTCTGGTAT
GAGGTAAAGTGTCTTGTACAAGATTCATTTCAACATTACAATGTTTTATG
ATATATCTTACCaaaaaaaTTCAGGATCAGCCACCTAAATCAATACAACA
TTTATCTAGAAACACTGCTGAAATATTCTCTACAAGAAATATTATTTACA
TTTCCAAACTTTCCTTAAGAGAATAACTTATGTTAagttaataaataaat
taaggTTCTTGTTATTGGAAGAtccaataattttcattttctattcaaga
aaattgttcaatttttttcgacaGAAGAATCATCCACATATTACACAATA
aactaaaatcattaaaatgatCCTTATTTTTCCAGGAATACAGTCATAGC
AACAGTATTACaagaattcaatttttcactttcgtcATACACCAAACCAA
CTCTACTTTCACTTTGTCATTTGGTGTTCAGGTTTGATCTACAGCTAACT
TGCTCGAACTTTAATCTTTCTTTCAATCGAACTCAACttccattttaaag
aagaacttCTTGTCCTTTCAAGATTGAAGGGGAGAACCTTGACGGTAGTG
CTATAGTAATTGTCAAAAACCCTTTTCCAAAGGAAGTATTCtttttttAG
GTGGTATTCTTATTCTATCTTTGCAGGAAGaaagttttgcatttttttga
atgTCTTCTAATTAACCAAATACTTGCAAAGCTAATTTATTCTATCATAT
GCGGAATTGAATTCCTAAAACTTCATTCCATTCGTTCCTTAACCAAAACT
GCGCTTTTTTCGAGCTTTTGGTTAATAGTCTAAacctaattttttgagtt
tctcAAAAATGATTACTTTTAAGTACTTTATGAAATCCGGAATTTTACGA
TGATGGTCTTTGTTACCTGCAAGTCTTTCATATTGTACCTCGTCTTGTCA
CTGCTCTAAAAGCTCGGACTATAacattggacctaccccggtggggtgga
ggtcctataaattaacttttttccgttcgttcgttattagctttcctcat
gattggctcgttagttttttctgattttttgcacaagatgtataactata
aaccctcaaatgtgacggagcccgttTTCGAATAACaaatattttgggca
aatttgggccaaaaatttcggctaaaaaacgggtcttttggactttggaa
attggatcattaactttttctgatttttgcatgaaagtaggtaaaagatc
gCTTAAGTAgattatttcaaaacatttttgttggcttaaaaaatgcatgt
ttatctataagaatcactaataacaagcatacatcaatgttcttagttaa
attactcaatttttttatgagatagatgttttttttgctcacgaagtctt
gaatatggaagaatattttaagagcatgaatgttttttataagaaacaaa
cgactaattttaatagatcgtcactatttgtgttctgaatgattgcttaa
tggtcacgctcacgtagatatcaattatatatgtgttaaatgcataatca
ggtaggtccataaaagtatcactttgTTCTTTATTATATTGTCAATAATT
TACTCTTTTATTAGGTTAAGCATATGCGGTTACAAGCAGCCAGAAGTTTC
ATGTCCTGGCATAtccaaagaaaatatttcgTCGTTATTCAATAAAACGA
AAGTTAGACTGTCGGCAAAATGTGTACAAGAATTAGTGACGGCTCTCCAA
TTCACATCGTAAGTCGTAACTAAAATGTGTTTGTTGTATAACTTATTTGT
ATAATTAAAATTAATAGCATGAAGCAAATTTTCAACGataattattatat
aaaaaaaccaaACATTTGCGTCCAAAGCTACCTATAAGAGGGTTGTATGT
GAGGTTGCTGGGGATCGTGGGGTTTATTCTCAGTAATCTGTTCCATGTTC
CACGTTCTCATGAAATTACACCGTTTACCACCCCTTGTAAACCAACTCTG
GAAGGCTTAGGGGTAATTTATATGTTTATCTACTTTATCTTTTTGCAGTT
ACAATGGTCTGTATGAGGAGTCGAAGATCGTTCTTGATTGTTTACATCAG
CATTCTCATTACTCTTTACTCTATGCTGGTACTCTGGTAAGTGAATCTTA
TTTTATTCATgtcagtgttaaaagttcttctttCGCCCCGGACGGGTTTC
CTTCTCAGTTAAGTATGAGGCTCATAATTCTATGTAcacaattcaccaaa
atttccaaaatatgtGCAGATTCGCTGTGTAAAATCCACTTTCCAGCTAA
GACGATAAATACTTGCCTTGACCACTGAATAATAGTCTGGCGAAGTCCTA
GTACAGTCGTAAGGACTGGCGAAAATGATAACCAATATTTATTATTCTAT
TATCTACTGTGTTTGatagtttgatttttcttgaaaaatagaCTCGTAAA
AATGTCGGCTAAAGGTTAACTTTAACTCCTTTAGGAGTTCCTAACGAGAT
CCAAGCTTTCAATACAGCAGATAATAAAGTGAAAGATATgggctttcatt
ttttaacgttttttttagAACACGTCGGCTTTAAAGAACGTTTTGGAATT
GTCAACTTCGGACAAGGATTTCGACGTTTGTCCGCCCATCGATCCGAGGA
AATGTGGTTATCGCGTTAAAGGAGGTATCTTTTCAGTTTAATAGCCCTCG
TAGAAATTAATGGTCTATGATGGACAGTAGCGTTATTCATCAGCGACGAT
GGACGAGGTTCCTGCAGGTTTAATTTGTGCTACGGCATACAGGCTATTTG
AGAATAGACCATTGACTTCGTAGCCCATTGACTTCGTAGCCCCAATCctt
cgtcatgattgcggcgcgttctaaACGCGACGCTAAatataagtggcttc
actttttcttgcctgcgCAAGGTCAGAGGTtttactctagcccttcgggc
ttcaaaATCAATGGAATAGACATTAAATgacttatttttttgtttttagg
aaAAACATCTGTAATGACTCCTCCTCGACCATCCTTCGTCAATTCCTTAT
CCATCGATCGAACAATGGAAGACTCAAATGCCTCGATCACTCAATCCAAA
TCTATAGCATCCCCATCAAACGTTACAATACATATAAAGACAAGTAGTAA
TAATAAAACCACCGTTACGGCTATTCCATCAATAGAGATAGTAAGTGAGG
GCACGGATAAAACAGACGGTGAAAATGATATGGAGAATGGTCACACGCCT
AATAAAAGAAGTAGTACGTATACTGATGAAGACTCTGAATTTGAGAATGA
TAAAACACCTTTAATATATTGTAATAGTTTGAGTAGTGATGGATCGACAA
CGATTGTGGTACTTAAATCAAACCCTTCTTCATCATCGACCAGTGAAAAA
AGTCAACAAGAAACACCCATGTGA Coding sequence (CDS) from alignment at sc0000120_pilon:683463..689336+ >XLOC_037264 ID=XLOC_037264|Name=XLOC_037264|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2748bp|location=Sequence derived from alignment at sc0000120_pilon:683463..689336+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACATTCTGGAGTTTATCAACGCTTTAAAGATGGACATTCTGGAGTT
TATCAACGCTTTAAAGCAAAAGACTGGTGATGATTATTTCATGCATTTGG
AGAAGTTGAAATCGTCACCTGAATTGATACAAGAGACCATTGATGTGCTA
GAATTAAAAAGTGACTCTGATCAAAAGACTGGTGATGATTATTTCATGCA
TTTGGAGAAGTTGAAATCGTCACCTGAATTGATACAAGAGACCATTGATG
TGCTAGAATTAAAAAGTGACTCTGATTTGGCAAATGCAATATGTGAAGCA
TTGTTTGTTCTTTACACTGATGTTGGTAACGAATCTCACAAAGTTTGTTT
GCAATTTATCCCGGCTGTAATATGGGCGTACTACTGTCAGCTTTCTCAAA
AGTTGGCAAATGCAATATGTGAAGCATTGTTTGTTCTTTACACTGATGTT
GGTAACGAATCTCACAAAGTTTGTTTGCAATTTATCCCGGCTGTAATATG
GGCGTACTACTGTCAGCTTTCTCAAAAGGCAAGAGGAAAGCCTGAAGCTT
TGCTATTAGCTTTCTATAATAAGGCAAGAGGAAAGCCTGAAGCTTTGCTA
TTAGCTTTCTATAATAAGtgTGTAACAAGGAATGTGGAAACACCCTTCAC
CAACTCTTTTCGTATTCCGAAACTCAGCAAACCTTCCGTTTTTCACGAGt
gTGTAACAAGGAATGTGGAAACACCCTTCACCAACTCTTTTCGTATTCCG
AAACTCAGCAAACCTTCCGTTTTTCACGAGCCCATGCAATTAGCGGCTTC
AGCTACGTTAACGGAAAACGCCTTGAATCAACATGACAAATCCAATAAAA
CGATCATTTTTAAAGGACCCACAAAACGCTTAGATCATATTCCTTCTGGT
ATGAGCCCATGCAATTAGCGGCTTCAGCTACGTTAACGGAAAACGCCTTG
AATCAACATGACAAATCCAATAAAACGATCATTTTTAAAGGACCCACAAA
ACGCTTAGATCATATTCCTTCTGGTATGAGGAATACAGTCATAGCAACAG
TATTACaagaattcaatttttcactttcgtcATACACCAAACCAACTCTA
CTTTCACTTTGTCATTTGGTGTTCAGGAATACAGTCATAGCAACAGTATT
ACaagaattcaatttttcactttcgtcATACACCAAACCAACTCTACTTT
CACTTTGTCATTTGGTGTTCAGGTTAAGCATATGCGGTTACAAGCAGCCA
GAAGTTTCATGTCCTGGCATAtccaaagaaaatatttcgTCGTTATTCAA
TAAAACGAAAGTTAGACTGTCGGCAAAATGTGTACAAGAATTAGTGACGG
CTCTCCAATTCACATCGTTAAGCATATGCGGTTACAAGCAGCCAGAAGTT
TCATGTCCTGGCATAtccaaagaaaatatttcgTCGTTATTCAATAAAAC
GAAAGTTAGACTGTCGGCAAAATGTGTACAAGAATTAGTGACGGCTCTCC
AATTCACATCTTACAATGGTCTGTATGAGGAGTCGAAGATCGTTCTTGAT
TGTTTACATCAGCATTCTCATTACTCTTTACTCTATGCTGGTACTCTGTT
ACAATGGTCTGTATGAGGAGTCGAAGATCGTTCTTGATTGTTTACATCAG
CATTCTCATTACTCTTTACTCTATGCTGGTACTCTGAACACGTCGGCTTT
AAAGAACGTTTTGGAATTGTCAACTTCGGACAAGGATTTCGACGTTTGTC
CGCCCATCGATCCGAGGAAATGTGGTTATCGCGTTAAAGGAGAACACGTC
GGCTTTAAAGAACGTTTTGGAATTGTCAACTTCGGACAAGGATTTCGACG
TTTGTCCGCCCATCGATCCGAGGAAATGTGGTTATCGCGTTAAAGGAGga
aAAACATCTGTAATGACTCCTCCTCGACCATCCTTCGTCAATTCCTTATC
CATCGATCGAACAATGGAAGACTCAAATGCCTCGATCACTCAATCCAAAT
CTATAGCATCCCCATCAAACGTTACAATACATATAAAGACAAGTAGTAAT
AATAAAACCACCGTTACGGCTATTCCATCAATAGAGATAGTAAGTGAGGG
CACGGATAAAACAGACGGTGAAAATGATATGGAGAATGGTCACACGCCTA
ATAAAAGAAGTAGTACGTATACTGATGAAGACTCTGAATTTGAGAATGAT
AAAACACCTTTAATATATTGTAATAGTTTGAGTAGTGATGGATCGACAAC
GATTGTGGTACTTAAATCAAACCCTTCTTCATCATCGACCAGTGAAAAAA
GTCAACAAGAAACACCCATGTGAgaaAAACATCTGTAATGACTCCTCCTC
GACCATCCTTCGTCAATTCCTTATCCATCGATCGAACAATGGAAGACTCA
AATGCCTCGATCACTCAATCCAAATCTATAGCATCCCCATCAAACGTTAC
AATACATATAAAGACAAGTAGTAATAATAAAACCACCGTTACGGCTATTC
CATCAATAGAGATAGTAAGTGAGGGCACGGATAAAACAGACGGTGAAAAT
GATATGGAGAATGGTCACACGCCTAATAAAAGAAGTAGTACGTATACTGA
TGAAGACTCTGAATTTGAGAATGATAAAACACCTTTAATATATTGTAATA
GTTTGAGTAGTGATGGATCGACAACGATTGTGGTACTTAAATCAAACCCT
TCTTCATCATCGACCAGTGAAAAAAGTCAACAAGAAACACCCATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:683463..689336 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 952-1374:5452 |
| Aaloc | 844-948:5019 |
| Aaloc | 757-843:4500 |
| Aaloc | 613-753:4066 |
| Aaloc | 517-609:2837 |
| Aaloc | 391-513:2379 |
| Aaloc | 310-390:1833 |
| Aaloc | 265-309:1554 |
| Aaloc | 139-264:1072 |
| Aaloc | 34-138:491 |
| Aaloc | 1-33:1 |
|
